EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016894 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4492 bases
Position: chrKQ557204.1:15822815-15827306
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022604	RVT_1	PF00078.27	4.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022880	-	1014	-	ENSXCOP00000022604	337 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016894	-	84	33.922	ENSXCOG00000012075	-	72	33.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016894	-	79	39.098	ENSAPOG00000014771	-	67	39.098	Acanthochromis_polyacanthus
ENSXCOG00000016894	-	67	43.172	ENSAPOG00000001366	-	63	43.172	Acanthochromis_polyacanthus
ENSXCOG00000016894	-	74	40.000	ENSAPOG00000015742	-	79	40.000	Acanthochromis_polyacanthus
ENSXCOG00000016894	-	73	33.205	ENSACIG00000020849	-	67	33.205	Amphilophus_citrinellus
ENSXCOG00000016894	-	86	49.141	ENSACIG00000010538	-	76	49.141	Amphilophus_citrinellus
ENSXCOG00000016894	-	77	34.363	ENSACIG00000020856	-	56	34.363	Amphilophus_citrinellus
ENSXCOG00000016894	-	78	45.149	ENSAOCG00000000894	-	82	45.714	Amphiprion_ocellaris
ENSXCOG00000016894	-	87	37.075	ENSAOCG00000019069	-	80	37.075	Amphiprion_ocellaris
ENSXCOG00000016894	-	73	40.486	ENSAOCG00000014605	-	52	40.486	Amphiprion_ocellaris
ENSXCOG00000016894	-	71	44.351	ENSAOCG00000012592	-	56	44.351	Amphiprion_ocellaris
ENSXCOG00000016894	-	80	30.855	ENSATEG00000019721	-	70	30.855	Anabas_testudineus
ENSXCOG00000016894	-	71	43.933	ENSACAG00000010816	-	67	43.933	Anolis_carolinensis
ENSXCOG00000016894	-	61	48.780	ENSACLG00000010837	-	51	48.780	Astatotilapia_calliptera
ENSXCOG00000016894	-	83	38.710	ENSACLG00000013571	-	69	38.710	Astatotilapia_calliptera
ENSXCOG00000016894	-	87	42.662	ENSACLG00000012857	-	80	42.662	Astatotilapia_calliptera
ENSXCOG00000016894	-	80	33.704	ENSAMXG00000038901	-	56	33.704	Astyanax_mexicanus
ENSXCOG00000016894	-	71	46.025	ENSAMXG00000041014	-	91	46.025	Astyanax_mexicanus
ENSXCOG00000016894	-	71	40.167	ENSAMXG00000040763	-	61	40.167	Astyanax_mexicanus
ENSXCOG00000016894	-	77	36.122	ENSAMXG00000035718	-	50	36.122	Astyanax_mexicanus
ENSXCOG00000016894	-	58	35.385	ENSCPBG00000017828	-	53	35.385	Chrysemys_picta_bellii
ENSXCOG00000016894	-	87	39.456	ENSCVAG00000018360	-	71	39.456	Cyprinodon_variegatus
ENSXCOG00000016894	-	93	32.915	ENSCVAG00000020933	-	70	32.915	Cyprinodon_variegatus
ENSXCOG00000016894	-	71	33.613	ENSELUG00000000386	-	53	33.613	Esox_lucius
ENSXCOG00000016894	-	87	32.886	ENSELUG00000014378	-	70	32.886	Esox_lucius
ENSXCOG00000016894	-	71	31.513	ENSELUG00000002589	-	50	31.513	Esox_lucius
ENSXCOG00000016894	-	80	30.370	ENSGAGG00000013921	-	72	30.370	Gopherus_agassizii
ENSXCOG00000016894	-	87	38.644	ENSHBUG00000007736	-	78	37.309	Haplochromis_burtoni
ENSXCOG00000016894	-	72	30.328	ENSHBUG00000003796	-	56	30.328	Haplochromis_burtoni
ENSXCOG00000016894	-	57	35.385	ENSIPUG00000010242	-	52	35.385	Ictalurus_punctatus
ENSXCOG00000016894	-	87	39.249	ENSKMAG00000014393	-	69	39.249	Kryptolebias_marmoratus
ENSXCOG00000016894	-	90	33.121	ENSLBEG00000023714	-	82	33.121	Labrus_bergylta
ENSXCOG00000016894	-	82	49.818	ENSLBEG00000020242	-	75	49.818	Labrus_bergylta
ENSXCOG00000016894	-	77	35.985	ENSLBEG00000004148	-	55	35.985	Labrus_bergylta
ENSXCOG00000016894	-	87	40.273	ENSMZEG00005017030	-	55	40.273	Maylandia_zebra
ENSXCOG00000016894	-	80	42.222	ENSMZEG00005016362	-	95	42.222	Maylandia_zebra
ENSXCOG00000016894	-	87	40.273	ENSMZEG00005011529	-	55	40.273	Maylandia_zebra
ENSXCOG00000016894	-	83	39.427	ENSNBRG00000012595	-	64	39.427	Neolamprologus_brichardi
ENSXCOG00000016894	-	93	36.050	ENSNBRG00000000972	-	79	36.050	Neolamprologus_brichardi
ENSXCOG00000016894	-	75	33.071	ENSNBRG00000022130	-	60	33.071	Neolamprologus_brichardi
ENSXCOG00000016894	-	77	36.260	ENSNBRG00000001934	-	56	36.260	Neolamprologus_brichardi
ENSXCOG00000016894	-	60	37.811	ENSNBRG00000003891	-	99	37.811	Neolamprologus_brichardi
ENSXCOG00000016894	-	70	48.729	ENSNBRG00000013792	-	69	48.729	Neolamprologus_brichardi
ENSXCOG00000016894	-	97	34.018	ENSORLG00000024464	-	60	34.018	Oryzias_latipes
ENSXCOG00000016894	-	57	40.933	ENSORLG00000028976	-	54	41.951	Oryzias_latipes
ENSXCOG00000016894	-	82	41.877	ENSORLG00000023713	-	70	41.877	Oryzias_latipes
ENSXCOG00000016894	-	86	42.612	ENSORLG00000028454	-	92	42.612	Oryzias_latipes
ENSXCOG00000016894	-	87	39.249	ENSORLG00000024236	-	77	39.249	Oryzias_latipes
ENSXCOG00000016894	-	81	38.828	ENSORLG00020004063	-	81	38.828	Oryzias_latipes_hni
ENSXCOG00000016894	-	87	41.638	ENSORLG00020014626	-	55	41.638	Oryzias_latipes_hni
ENSXCOG00000016894	-	64	42.593	ENSORLG00020022004	-	74	42.593	Oryzias_latipes_hni
ENSXCOG00000016894	-	71	44.351	ENSORLG00020007779	-	64	44.351	Oryzias_latipes_hni
ENSXCOG00000016894	-	87	39.590	ENSORLG00020014149	-	91	39.590	Oryzias_latipes_hni
ENSXCOG00000016894	-	71	44.770	ENSORLG00020018629	-	64	44.770	Oryzias_latipes_hni
ENSXCOG00000016894	-	71	44.118	ENSORLG00020007002	-	94	44.118	Oryzias_latipes_hni
ENSXCOG00000016894	-	64	53.704	ENSORLG00015021848	-	71	53.704	Oryzias_latipes_hsok
ENSXCOG00000016894	-	82	39.350	ENSORLG00015022393	-	92	39.350	Oryzias_latipes_hsok
ENSXCOG00000016894	-	76	38.132	ENSORLG00015021206	-	50	38.132	Oryzias_latipes_hsok
ENSXCOG00000016894	-	71	45.188	ENSORLG00015007703	-	62	45.188	Oryzias_latipes_hsok
ENSXCOG00000016894	-	86	49.658	ENSORLG00015020895	-	78	49.658	Oryzias_latipes_hsok
ENSXCOG00000016894	-	78	38.783	ENSORLG00015000419	-	74	38.783	Oryzias_latipes_hsok
ENSXCOG00000016894	-	69	48.729	ENSORLG00015008227	-	65	48.729	Oryzias_latipes_hsok
ENSXCOG00000016894	-	82	41.281	ENSOMEG00000013211	-	66	41.281	Oryzias_melastigma
ENSXCOG00000016894	-	61	44.878	ENSPKIG00000013511	-	70	44.878	Paramormyrops_kingsleyae
ENSXCOG00000016894	-	56	49.020	ENSPKIG00000024018	-	68	49.020	Paramormyrops_kingsleyae
ENSXCOG00000016894	-	69	34.615	ENSPMGG00000014421	-	56	34.615	Periophthalmus_magnuspinnatus
ENSXCOG00000016894	-	92	34.603	ENSPLAG00000015080	-	73	34.603	Poecilia_latipinna
ENSXCOG00000016894	-	82	31.650	ENSPMEG00000004673	-	73	31.650	Poecilia_mexicana
ENSXCOG00000016894	-	87	31.650	ENSPREG00000004933	-	74	31.650	Poecilia_reticulata
ENSXCOG00000016894	-	87	53.925	ENSPREG00000001352	-	82	53.925	Poecilia_reticulata
ENSXCOG00000016894	-	87	36.395	ENSPREG00000006501	-	51	36.395	Poecilia_reticulata
ENSXCOG00000016894	-	86	32.646	ENSPREG00000010319	-	69	32.646	Poecilia_reticulata
ENSXCOG00000016894	-	77	35.769	ENSPNYG00000002652	-	67	35.769	Pundamilia_nyererei
ENSXCOG00000016894	-	83	50.179	ENSPNYG00000002466	-	93	50.179	Pundamilia_nyererei
ENSXCOG00000016894	-	83	48.214	ENSPNYG00000023697	-	65	48.214	Pundamilia_nyererei
ENSXCOG00000016894	-	71	42.678	ENSPNAG00000014375	-	58	42.678	Pygocentrus_nattereri
ENSXCOG00000016894	-	82	38.849	ENSPNAG00000002786	-	68	38.849	Pygocentrus_nattereri
ENSXCOG00000016894	-	86	53.608	ENSPNAG00000024749	-	68	53.608	Pygocentrus_nattereri
ENSXCOG00000016894	-	83	31.317	ENSPNAG00000024211	-	59	31.317	Pygocentrus_nattereri
ENSXCOG00000016894	-	80	35.688	ENSPNAG00000010342	-	85	35.688	Pygocentrus_nattereri
ENSXCOG00000016894	-	82	36.727	ENSSMAG00000014015	-	60	36.727	Scophthalmus_maximus
ENSXCOG00000016894	-	71	32.780	ENSSDUG00000017945	-	66	32.780	Seriola_dumerili
ENSXCOG00000016894	-	85	37.500	ENSSDUG00000021791	-	96	37.500	Seriola_dumerili
ENSXCOG00000016894	-	75	37.402	ENSSDUG00000015364	-	55	37.402	Seriola_dumerili
ENSXCOG00000016894	-	88	37.288	ENSSLDG00000006955	-	68	37.288	Seriola_lalandi_dorsalis
ENSXCOG00000016894	-	84	44.681	ENSSPUG00000015446	-	63	44.681	Sphenodon_punctatus
ENSXCOG00000016894	-	82	40.217	ENSSPAG00000000151	-	60	40.217	Stegastes_partitus
ENSXCOG00000016894	-	85	37.153	ENSSPAG00000012089	-	77	37.153	Stegastes_partitus
ENSXCOG00000016894	-	77	37.931	ENSXMAG00000026184	-	87	37.931	Xiphophorus_maculatus
ENSXCOG00000016894	-	85	32.990	ENSXMAG00000023211	-	64	32.990	Xiphophorus_maculatus