EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016907 (Gene tree)
Gene ID: -
Gene Symbol: sall3a
Alias: sall3
Full Name: spalt-like transcription factor 3a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4813 bases
Position: chrKQ557218.1:23422767-23427579
Accession: ZDB-GENE-020228-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022619	zf-C2H2	PF00096.26	1.1e-24	1	5
ENSXCOP00000022619	zf-C2H2	PF00096.26	1.1e-24	2	5
ENSXCOP00000022619	zf-C2H2	PF00096.26	1.1e-24	3	5
ENSXCOP00000022619	zf-C2H2	PF00096.26	1.1e-24	4	5
ENSXCOP00000022619	zf-C2H2	PF00096.26	1.1e-24	5	5
ENSXCOP00000022619	zf-met	PF12874.7	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022895	-	4146	-	ENSXCOP00000022619	1381 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016907	sall3a	66	64.865	ENSXCOG00000018799	sall3b	91	63.351
ENSXCOG00000016907	sall3a	71	65.385	ENSXCOG00000015467	sall4	84	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016907	sall3a	69	76.172	ENSG00000256463	SALL3	97	76.172	Homo_sapiens
ENSXCOG00000016907	sall3a	93	64.400	ENSAPOG00000004264	sall3b	70	64.400	Acanthochromis_polyacanthus
ENSXCOG00000016907	sall3a	100	84.532	ENSAPOG00000020922	sall3a	100	84.173	Acanthochromis_polyacanthus
ENSXCOG00000016907	sall3a	96	64.683	ENSAMEG00000010206	SALL3	99	65.173	Ailuropoda_melanoleuca
ENSXCOG00000016907	sall3a	69	64.683	ENSACIG00000019407	sall3b	97	64.683	Amphilophus_citrinellus
ENSXCOG00000016907	sall3a	71	93.385	ENSACIG00000014041	sall3a	98	93.385	Amphilophus_citrinellus
ENSXCOG00000016907	sall3a	100	85.776	ENSAOCG00000010863	sall3a	100	86.063	Amphiprion_ocellaris
ENSXCOG00000016907	sall3a	93	64.542	ENSAOCG00000012779	sall3b	69	64.542	Amphiprion_ocellaris
ENSXCOG00000016907	sall3a	94	92.996	ENSAPEG00000019278	sall3a	98	82.836	Amphiprion_percula
ENSXCOG00000016907	sall3a	69	63.745	ENSAPEG00000018170	sall3b	99	63.745	Amphiprion_percula
ENSXCOG00000016907	sall3a	93	91.829	ENSATEG00000024524	sall3a	98	97.436	Anabas_testudineus
ENSXCOG00000016907	sall3a	64	65.714	ENSATEG00000004914	sall3b	69	64.683	Anabas_testudineus
ENSXCOG00000016907	sall3a	93	78.125	ENSAPLG00000013214	SALL3	100	78.125	Anas_platyrhynchos
ENSXCOG00000016907	sall3a	96	77.734	ENSACAG00000000478	SALL3	98	77.734	Anolis_carolinensis
ENSXCOG00000016907	sall3a	88	64.193	ENSANAG00000032412	SALL3	88	64.834	Aotus_nancymaae
ENSXCOG00000016907	sall3a	94	92.607	ENSACLG00000022451	sall3a	99	92.607	Astatotilapia_calliptera
ENSXCOG00000016907	sall3a	64	64.286	ENSACLG00000001619	sall3b	69	64.286	Astatotilapia_calliptera
ENSXCOG00000016907	sall3a	54	67.031	ENSAMXG00000035442	sall3b	80	67.031	Astyanax_mexicanus
ENSXCOG00000016907	sall3a	93	80.545	ENSAMXG00000011185	sall3a	98	80.303	Astyanax_mexicanus
ENSXCOG00000016907	sall3a	98	57.709	ENSBTAG00000050200	SALL3	97	72.157	Bos_taurus
ENSXCOG00000016907	sall3a	66	75.781	ENSCJAG00000007332	SALL3	71	75.781	Callithrix_jacchus
ENSXCOG00000016907	sall3a	67	75.000	ENSCAFG00000000013	SALL3	100	75.000	Canis_familiaris
ENSXCOG00000016907	sall3a	71	64.746	ENSCAFG00020015092	SALL3	100	59.513	Canis_lupus_dingo
ENSXCOG00000016907	sall3a	88	63.538	ENSCHIG00000000145	SALL3	73	64.336	Capra_hircus
ENSXCOG00000016907	sall3a	76	73.828	ENSTSYG00000028846	SALL3	99	73.828	Carlito_syrichta
ENSXCOG00000016907	sall3a	76	76.172	ENSCAPG00000006496	SALL3	93	76.172	Cavia_aperea
ENSXCOG00000016907	sall3a	67	75.000	ENSCCAG00000034863	SALL3	71	75.000	Cebus_capucinus
ENSXCOG00000016907	sall3a	67	75.781	ENSCATG00000029727	SALL3	94	73.234	Cercocebus_atys
ENSXCOG00000016907	sall3a	67	76.562	ENSCLAG00000007727	SALL3	73	76.562	Chinchilla_lanigera
ENSXCOG00000016907	sall3a	71	65.109	ENSCSAG00000018244	SALL3	72	65.142	Chlorocebus_sabaeus
ENSXCOG00000016907	sall3a	63	69.874	ENSCHOG00000013939	-	91	69.874	Choloepus_hoffmanni
ENSXCOG00000016907	sall3a	93	78.516	ENSCPBG00000003657	SALL3	98	78.516	Chrysemys_picta_bellii
ENSXCOG00000016907	sall3a	69	73.684	ENSCANG00000030302	SALL3	99	73.684	Colobus_angolensis_palliatus
ENSXCOG00000016907	sall3a	93	76.562	ENSCGRG00001018203	Sall3	98	76.562	Cricetulus_griseus_chok1gshd
ENSXCOG00000016907	sall3a	93	75.000	ENSCGRG00000017127	Sall3	99	75.000	Cricetulus_griseus_crigri
ENSXCOG00000016907	sall3a	68	65.000	ENSCSEG00000009569	sall3b	96	65.000	Cynoglossus_semilaevis
ENSXCOG00000016907	sall3a	95	86.940	ENSCSEG00000009058	sall3a	98	79.375	Cynoglossus_semilaevis
ENSXCOG00000016907	sall3a	75	88.889	ENSCVAG00000009684	sall3a	95	88.889	Cyprinodon_variegatus
ENSXCOG00000016907	sall3a	81	71.765	ENSCVAG00000017005	sall3b	91	72.941	Cyprinodon_variegatus
ENSXCOG00000016907	sall3a	97	50.293	ENSDARG00000057586	sall3b	97	50.147	Danio_rerio
ENSXCOG00000016907	sall3a	94	74.708	ENSDARG00000079613	sall3a	98	74.708	Danio_rerio
ENSXCOG00000016907	sall3a	70	63.000	ENSDNOG00000025483	SALL3	96	63.136	Dasypus_novemcinctus
ENSXCOG00000016907	sall3a	69	61.747	ENSDORG00000002702	Sall3	87	62.247	Dipodomys_ordii
ENSXCOG00000016907	sall3a	73	60.267	ENSETEG00000001481	SALL3	92	62.020	Echinops_telfairi
ENSXCOG00000016907	sall3a	93	75.391	ENSEASG00005002071	SALL3	98	75.391	Equus_asinus_asinus
ENSXCOG00000016907	sall3a	93	75.000	ENSECAG00000015414	SALL3	98	75.000	Equus_caballus
ENSXCOG00000016907	sall3a	98	72.130	ENSELUG00000020351	sall3a	99	72.760	Esox_lucius
ENSXCOG00000016907	sall3a	92	66.800	ENSELUG00000009541	sall3b	98	66.800	Esox_lucius
ENSXCOG00000016907	sall3a	92	73.307	ENSFCAG00000028839	SALL3	97	73.307	Felis_catus
ENSXCOG00000016907	sall3a	93	78.125	ENSFALG00000013343	SALL3	98	78.125	Ficedula_albicollis
ENSXCOG00000016907	sall3a	98	76.012	ENSGMOG00000006649	sall3a	100	75.994	Gadus_morhua
ENSXCOG00000016907	sall3a	93	78.125	ENSGALG00000041404	SALL3	96	78.125	Gallus_gallus
ENSXCOG00000016907	sall3a	64	61.224	ENSGAFG00000014435	-	96	61.224	Gambusia_affinis
ENSXCOG00000016907	sall3a	100	95.224	ENSGAFG00000001581	sall3a	100	95.224	Gambusia_affinis
ENSXCOG00000016907	sall3a	98	81.305	ENSGACG00000005503	sall3a	100	80.645	Gasterosteus_aculeatus
ENSXCOG00000016907	sall3a	93	61.538	ENSGACG00000002533	sall3b	69	61.538	Gasterosteus_aculeatus
ENSXCOG00000016907	sall3a	93	78.125	ENSGAGG00000000925	SALL3	98	78.125	Gopherus_agassizii
ENSXCOG00000016907	sall3a	66	76.172	ENSGGOG00000008127	SALL3	94	73.606	Gorilla_gorilla
ENSXCOG00000016907	sall3a	94	92.607	ENSHBUG00000004486	sall3a	98	92.607	Haplochromis_burtoni
ENSXCOG00000016907	sall3a	69	65.000	ENSHBUG00000018127	sall3b	95	65.000	Haplochromis_burtoni
ENSXCOG00000016907	sall3a	93	75.781	ENSHGLG00000000824	SALL3	71	75.781	Heterocephalus_glaber_female
ENSXCOG00000016907	sall3a	93	75.781	ENSHGLG00100008694	SALL3	88	75.781	Heterocephalus_glaber_male
ENSXCOG00000016907	sall3a	83	63.462	ENSHCOG00000004745	sall3b	64	63.462	Hippocampus_comes
ENSXCOG00000016907	sall3a	90	88.803	ENSHCOG00000010423	sall3a	98	88.803	Hippocampus_comes
ENSXCOG00000016907	sall3a	94	80.156	ENSIPUG00000003378	sall3	98	65.460	Ictalurus_punctatus
ENSXCOG00000016907	sall3a	74	65.258	ENSIPUG00000003006	sall3b	83	65.258	Ictalurus_punctatus
ENSXCOG00000016907	sall3a	94	75.000	ENSSTOG00000004145	SALL3	71	75.000	Ictidomys_tridecemlineatus
ENSXCOG00000016907	sall3a	98	58.238	ENSJJAG00000014351	Sall3	98	58.866	Jaculus_jaculus
ENSXCOG00000016907	sall3a	64	63.462	ENSKMAG00000012418	sall3b	70	63.462	Kryptolebias_marmoratus
ENSXCOG00000016907	sall3a	95	88.994	ENSKMAG00000003846	sall3a	99	93.443	Kryptolebias_marmoratus
ENSXCOG00000016907	sall3a	96	92.969	ENSLBEG00000005152	sall3a	98	92.969	Labrus_bergylta
ENSXCOG00000016907	sall3a	70	62.162	ENSLBEG00000015706	sall3b	96	62.162	Labrus_bergylta
ENSXCOG00000016907	sall3a	93	82.031	ENSLOCG00000007831	sall3a	98	82.031	Lepisosteus_oculatus
ENSXCOG00000016907	sall3a	98	60.462	ENSLAFG00000013521	SALL3	73	67.411	Loxodonta_africana
ENSXCOG00000016907	sall3a	76	70.149	ENSMFAG00000031402	SALL3	91	72.862	Macaca_fascicularis
ENSXCOG00000016907	sall3a	70	63.265	ENSMAMG00000006101	sall3b	96	63.265	Mastacembelus_armatus
ENSXCOG00000016907	sall3a	64	64.683	ENSMZEG00005026224	sall3b	69	64.683	Maylandia_zebra
ENSXCOG00000016907	sall3a	94	92.607	ENSMZEG00005007586	sall3a	99	92.607	Maylandia_zebra
ENSXCOG00000016907	sall3a	93	78.125	ENSMGAG00000002297	SALL3	98	78.125	Meleagris_gallopavo
ENSXCOG00000016907	sall3a	93	75.781	ENSMAUG00000011828	Sall3	98	75.781	Mesocricetus_auratus
ENSXCOG00000016907	sall3a	70	75.686	ENSMICG00000017395	SALL3	97	75.686	Microcebus_murinus
ENSXCOG00000016907	sall3a	93	77.344	ENSMOCG00000013205	Sall3	70	77.344	Microtus_ochrogaster
ENSXCOG00000016907	sall3a	80	61.224	ENSMMOG00000014246	sall3b	97	61.224	Mola_mola
ENSXCOG00000016907	sall3a	71	91.051	ENSMMOG00000003253	sall3a	99	91.051	Mola_mola
ENSXCOG00000016907	sall3a	93	77.734	ENSMODG00000012231	SALL3	98	77.734	Monodelphis_domestica
ENSXCOG00000016907	sall3a	65	63.462	ENSMALG00000015200	sall3b	68	63.462	Monopterus_albus
ENSXCOG00000016907	sall3a	95	87.597	ENSMALG00000003343	sall3a	99	87.500	Monopterus_albus
ENSXCOG00000016907	sall3a	93	76.953	MGP_CAROLIEiJ_G0022442	Sall3	98	76.953	Mus_caroli
ENSXCOG00000016907	sall3a	93	76.562	ENSMUSG00000024565	Sall3	98	76.562	Mus_musculus
ENSXCOG00000016907	sall3a	93	76.953	MGP_PahariEiJ_G0019170	Sall3	98	76.953	Mus_pahari
ENSXCOG00000016907	sall3a	93	76.953	MGP_SPRETEiJ_G0023357	Sall3	98	76.953	Mus_spretus
ENSXCOG00000016907	sall3a	79	76.961	ENSMPUG00000016646	SALL3	97	80.905	Mustela_putorius_furo
ENSXCOG00000016907	sall3a	98	58.938	ENSMLUG00000010582	SALL3	73	64.949	Myotis_lucifugus
ENSXCOG00000016907	sall3a	93	76.562	ENSNGAG00000023772	Sall3	98	76.562	Nannospalax_galili
ENSXCOG00000016907	sall3a	97	85.004	ENSNBRG00000008974	sall3a	100	84.558	Neolamprologus_brichardi
ENSXCOG00000016907	sall3a	68	65.000	ENSNBRG00000016034	sall3b	95	65.000	Neolamprologus_brichardi
ENSXCOG00000016907	sall3a	70	73.828	ENSNLEG00000008217	SALL3	97	73.828	Nomascus_leucogenys
ENSXCOG00000016907	sall3a	98	57.887	ENSODEG00000002692	SALL3	91	66.026	Octodon_degus
ENSXCOG00000016907	sall3a	98	80.457	ENSONIG00000007305	sall3a	98	79.794	Oreochromis_niloticus
ENSXCOG00000016907	sall3a	65	63.218	ENSONIG00000013791	sall3b	69	63.218	Oreochromis_niloticus
ENSXCOG00000016907	sall3a	67	74.219	ENSOCUG00000029398	SALL3	99	74.219	Oryctolagus_cuniculus
ENSXCOG00000016907	sall3a	90	61.538	ENSOCUG00000004364	-	92	45.694	Oryctolagus_cuniculus
ENSXCOG00000016907	sall3a	100	82.114	ENSORLG00000020718	sall3a	100	82.187	Oryzias_latipes
ENSXCOG00000016907	sall3a	98	82.580	ENSORLG00020001794	sall3a	100	82.728	Oryzias_latipes_hni
ENSXCOG00000016907	sall3a	77	63.462	ENSORLG00020015105	sall3b	54	63.462	Oryzias_latipes_hni
ENSXCOG00000016907	sall3a	98	82.641	ENSORLG00015018152	sall3a	97	94.737	Oryzias_latipes_hsok
ENSXCOG00000016907	sall3a	66	68.681	ENSORLG00015005877	sall3b	77	63.462	Oryzias_latipes_hsok
ENSXCOG00000016907	sall3a	98	80.073	ENSOMEG00000011390	sall3a	98	79.927	Oryzias_melastigma
ENSXCOG00000016907	sall3a	70	65.361	ENSOGAG00000031681	SALL3	73	65.755	Otolemur_garnettii
ENSXCOG00000016907	sall3a	77	65.060	ENSOARG00000004353	SALL3	93	64.773	Ovis_aries
ENSXCOG00000016907	sall3a	76	67.164	ENSPPAG00000029586	-	98	74.194	Pan_paniscus
ENSXCOG00000016907	sall3a	66	76.172	ENSPTRG00000010126	SALL3	92	73.606	Pan_troglodytes
ENSXCOG00000016907	sall3a	66	75.391	ENSPANG00000006485	SALL3	95	72.862	Papio_anubis
ENSXCOG00000016907	sall3a	89	82.639	ENSPKIG00000013427	sall3a	94	82.639	Paramormyrops_kingsleyae
ENSXCOG00000016907	sall3a	98	59.111	ENSPKIG00000018271	SALL3	96	75.875	Paramormyrops_kingsleyae
ENSXCOG00000016907	sall3a	93	78.516	ENSPSIG00000008556	SALL3	99	85.787	Pelodiscus_sinensis
ENSXCOG00000016907	sall3a	58	61.602	ENSPMGG00000002913	sall3b	86	61.191	Periophthalmus_magnuspinnatus
ENSXCOG00000016907	sall3a	93	86.873	ENSPMGG00000017042	sall3a	98	77.671	Periophthalmus_magnuspinnatus
ENSXCOG00000016907	sall3a	98	58.807	ENSPEMG00000022799	Sall3	98	59.382	Peromyscus_maniculatus_bairdii
ENSXCOG00000016907	sall3a	93	77.734	ENSPCIG00000002472	SALL3	98	77.734	Phascolarctos_cinereus
ENSXCOG00000016907	sall3a	98	89.309	ENSPFOG00000019127	sall3a	98	89.309	Poecilia_formosa
ENSXCOG00000016907	sall3a	61	63.462	ENSPFOG00000013292	sall3b	99	63.462	Poecilia_formosa
ENSXCOG00000016907	sall3a	98	89.148	ENSPLAG00000018123	sall3a	98	92.754	Poecilia_latipinna
ENSXCOG00000016907	sall3a	61	63.462	ENSPLAG00000013919	sall3b	95	63.462	Poecilia_latipinna
ENSXCOG00000016907	sall3a	88	88.149	ENSPMEG00000014946	sall3a	93	88.149	Poecilia_mexicana
ENSXCOG00000016907	sall3a	73	48.276	ENSPMEG00000023703	sall3b	62	87.500	Poecilia_mexicana
ENSXCOG00000016907	sall3a	88	87.510	ENSPREG00000014420	sall3a	93	87.510	Poecilia_reticulata
ENSXCOG00000016907	sall3a	69	46.901	ENSPREG00000015079	sall3b	70	46.701	Poecilia_reticulata
ENSXCOG00000016907	sall3a	66	76.562	ENSPPYG00000009253	SALL3	73	76.562	Pongo_abelii
ENSXCOG00000016907	sall3a	98	59.899	ENSPCAG00000006522	SALL3	73	66.465	Procavia_capensis
ENSXCOG00000016907	sall3a	70	75.294	ENSPCOG00000012553	SALL3	97	75.294	Propithecus_coquereli
ENSXCOG00000016907	sall3a	98	48.735	ENSPVAG00000014645	SALL3	73	53.455	Pteropus_vampyrus
ENSXCOG00000016907	sall3a	97	85.004	ENSPNYG00000012783	sall3a	100	84.558	Pundamilia_nyererei
ENSXCOG00000016907	sall3a	68	65.000	ENSPNYG00000005353	sall3b	95	65.000	Pundamilia_nyererei
ENSXCOG00000016907	sall3a	92	63.462	ENSPNAG00000017141	sall3b	97	63.462	Pygocentrus_nattereri
ENSXCOG00000016907	sall3a	86	61.426	ENSRNOG00000026116	Sall3	97	61.116	Rattus_norvegicus
ENSXCOG00000016907	sall3a	72	76.562	ENSRROG00000034130	SALL3	96	76.562	Rhinopithecus_roxellana
ENSXCOG00000016907	sall3a	69	75.781	ENSSBOG00000023380	SALL3	100	75.781	Saimiri_boliviensis_boliviensis
ENSXCOG00000016907	sall3a	93	78.125	ENSSHAG00000015872	SALL3	98	78.125	Sarcophilus_harrisii
ENSXCOG00000016907	sall3a	99	59.019	ENSSFOG00015009159	SALL3	96	80.303	Scleropages_formosus
ENSXCOG00000016907	sall3a	76	92.857	ENSSFOG00015012223	sall3a	99	92.857	Scleropages_formosus
ENSXCOG00000016907	sall3a	64	65.217	ENSSMAG00000019762	sall3b	69	65.217	Scophthalmus_maximus
ENSXCOG00000016907	sall3a	96	91.051	ENSSMAG00000007674	sall3a	98	91.051	Scophthalmus_maximus
ENSXCOG00000016907	sall3a	98	81.361	ENSSDUG00000011099	sall3a	98	81.287	Seriola_dumerili
ENSXCOG00000016907	sall3a	69	65.873	ENSSDUG00000010584	sall3b	99	65.873	Seriola_dumerili
ENSXCOG00000016907	sall3a	98	81.287	ENSSLDG00000012706	sall3a	98	81.213	Seriola_lalandi_dorsalis
ENSXCOG00000016907	sall3a	69	56.953	ENSSLDG00000016800	sall3b	70	56.851	Seriola_lalandi_dorsalis
ENSXCOG00000016907	sall3a	68	64.981	ENSSPAG00000003172	sall3b	97	64.981	Stegastes_partitus
ENSXCOG00000016907	sall3a	87	93.600	ENSSPAG00000013114	sall3a	99	93.385	Stegastes_partitus
ENSXCOG00000016907	sall3a	98	57.937	ENSSSCG00000004858	SALL3	98	57.914	Sus_scrofa
ENSXCOG00000016907	sall3a	93	67.442	ENSTGUG00000006541	SALL3	100	67.442	Taeniopygia_guttata
ENSXCOG00000016907	sall3a	68	93.023	ENSTRUG00000017423	sall3a	99	93.023	Takifugu_rubripes
ENSXCOG00000016907	sall3a	53	82.973	ENSTNIG00000001257	sall3a	94	79.003	Tetraodon_nigroviridis
ENSXCOG00000016907	sall3a	84	62.745	ENSTBEG00000008964	SALL3	80	62.745	Tupaia_belangeri
ENSXCOG00000016907	sall3a	71	62.673	ENSTTRG00000004958	SALL3	86	62.907	Tursiops_truncatus
ENSXCOG00000016907	sall3a	76	84.444	ENSUAMG00000016908	SALL3	97	75.806	Ursus_americanus
ENSXCOG00000016907	sall3a	80	85.714	ENSVVUG00000018838	SALL3	99	80.645	Vulpes_vulpes
ENSXCOG00000016907	sall3a	93	79.681	ENSXETG00000000845	sall3	69	79.681	Xenopus_tropicalis
ENSXCOG00000016907	sall3a	98	90.327	ENSXMAG00000023447	sall3a	98	90.327	Xiphophorus_maculatus
ENSXCOG00000016907	sall3a	82	61.702	ENSXMAG00000000798	sall3b	92	62.827	Xiphophorus_maculatus