EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016917 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5710 bases
Position: chrKQ557218.1:23729201-23734910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022629	S10_plectin	PF03501.15	8.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022905	-	489	-	ENSXCOP00000022629	162 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016917	-	61	65.347	ENSXCOG00000015881	rps10	57	65.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016917	-	65	60.952	ENSAPOG00000016494	-	54	60.952	Acanthochromis_polyacanthus
ENSXCOG00000016917	-	73	84.874	ENSAPOG00000014059	-	82	84.874	Acanthochromis_polyacanthus
ENSXCOG00000016917	-	74	61.667	ENSACIG00000019704	-	58	61.667	Amphilophus_citrinellus
ENSXCOG00000016917	-	85	88.321	ENSACIG00000013806	-	82	84.354	Amphilophus_citrinellus
ENSXCOG00000016917	-	88	83.099	ENSAOCG00000011000	-	83	83.099	Amphiprion_ocellaris
ENSXCOG00000016917	-	69	62.162	ENSAOCG00000007730	-	65	62.162	Amphiprion_ocellaris
ENSXCOG00000016917	-	54	56.818	ENSAPEG00000017745	-	56	56.818	Amphiprion_percula
ENSXCOG00000016917	-	67	85.185	ENSAPEG00000019531	-	61	85.185	Amphiprion_percula
ENSXCOG00000016917	-	63	67.647	ENSATEG00000004340	-	72	67.647	Anabas_testudineus
ENSXCOG00000016917	-	86	55.000	ENSACLG00000001013	-	76	55.000	Astatotilapia_calliptera
ENSXCOG00000016917	-	77	79.200	ENSAMXG00000037914	-	75	79.200	Astyanax_mexicanus
ENSXCOG00000016917	-	58	55.319	WBGene00004479	rps-10	62	55.319	Caenorhabditis_elegans
ENSXCOG00000016917	-	63	59.223	ENSCING00000006180	-	64	59.223	Ciona_intestinalis
ENSXCOG00000016917	-	88	81.690	ENSCSEG00000009179	-	84	81.690	Cynoglossus_semilaevis
ENSXCOG00000016917	-	62	56.436	FBgn0027494	RpS10a	61	56.436	Drosophila_melanogaster
ENSXCOG00000016917	-	73	55.932	FBgn0285947	RpS10b	71	55.932	Drosophila_melanogaster
ENSXCOG00000016917	-	63	56.250	ENSEBUG00000015221	-	73	56.250	Eptatretus_burgeri
ENSXCOG00000016917	-	93	92.000	ENSFHEG00000008769	-	93	92.000	Fundulus_heteroclitus
ENSXCOG00000016917	-	100	85.802	ENSGAFG00000001335	-	75	85.802	Gambusia_affinis
ENSXCOG00000016917	-	81	87.786	ENSHBUG00000023819	-	79	87.786	Haplochromis_burtoni
ENSXCOG00000016917	-	86	55.000	ENSHBUG00000018067	-	76	55.000	Haplochromis_burtoni
ENSXCOG00000016917	-	81	64.925	ENSLBEG00000020432	-	84	64.925	Labrus_bergylta
ENSXCOG00000016917	-	77	66.400	ENSLACG00000010998	-	72	66.400	Latimeria_chalumnae
ENSXCOG00000016917	-	81	87.023	ENSMZEG00005007838	-	79	87.023	Maylandia_zebra
ENSXCOG00000016917	-	86	55.000	ENSMZEG00005026198	-	76	55.000	Maylandia_zebra
ENSXCOG00000016917	-	60	84.694	ENSMMOG00000003228	-	55	84.694	Mola_mola
ENSXCOG00000016917	-	78	61.905	ENSMMOG00000014380	-	62	61.905	Mola_mola
ENSXCOG00000016917	-	75	59.016	ENSMALG00000015614	-	76	59.016	Monopterus_albus
ENSXCOG00000016917	-	78	88.095	ENSNBRG00000008848	-	99	85.211	Neolamprologus_brichardi
ENSXCOG00000016917	-	86	55.000	ENSNBRG00000016554	-	76	55.000	Neolamprologus_brichardi
ENSXCOG00000016917	-	88	69.930	ENSPKIG00000013061	-	79	69.930	Paramormyrops_kingsleyae
ENSXCOG00000016917	-	92	77.181	ENSPMGG00000017071	-	80	77.181	Periophthalmus_magnuspinnatus
ENSXCOG00000016917	-	61	71.717	ENSPMAG00000010266	-	53	71.717	Petromyzon_marinus
ENSXCOG00000016917	-	64	63.107	ENSPMAG00000003064	-	64	63.107	Petromyzon_marinus
ENSXCOG00000016917	-	72	92.308	ENSPLAG00000012690	-	70	92.308	Poecilia_latipinna
ENSXCOG00000016917	-	81	87.023	ENSPNYG00000012665	-	79	87.023	Pundamilia_nyererei
ENSXCOG00000016917	-	86	54.286	ENSPNYG00000006286	-	76	54.286	Pundamilia_nyererei
ENSXCOG00000016917	-	88	58.451	ENSPNAG00000021290	-	75	58.451	Pygocentrus_nattereri
ENSXCOG00000016917	-	62	48.000	YMR230W	RPS10B	93	48.000	Saccharomyces_cerevisiae
ENSXCOG00000016917	-	62	47.000	YOR293W	RPS10A	93	47.000	Saccharomyces_cerevisiae
ENSXCOG00000016917	-	66	73.148	ENSSFOG00015012004	-	61	73.148	Scleropages_formosus
ENSXCOG00000016917	-	88	68.310	ENSSFOG00015009603	-	71	68.310	Scleropages_formosus
ENSXCOG00000016917	-	84	86.029	ENSSDUG00000010997	-	81	86.029	Seriola_dumerili
ENSXCOG00000016917	-	89	57.931	ENSSDUG00000011052	-	88	57.931	Seriola_dumerili
ENSXCOG00000016917	-	86	59.286	ENSSLDG00000016257	-	75	59.286	Seriola_lalandi_dorsalis
ENSXCOG00000016917	-	91	85.034	ENSSLDG00000012473	-	94	85.034	Seriola_lalandi_dorsalis
ENSXCOG00000016917	-	71	78.448	ENSSPAG00000015615	-	91	78.448	Stegastes_partitus
ENSXCOG00000016917	-	59	66.667	ENSSPAG00000012512	-	50	66.667	Stegastes_partitus
ENSXCOG00000016917	-	61	74.747	ENSSSCG00000033521	-	61	74.747	Sus_scrofa
ENSXCOG00000016917	-	77	65.873	ENSXETG00000032983	-	66	68.254	Xenopus_tropicalis
ENSXCOG00000016917	-	68	80.992	ENSXMAG00000029046	-	70	80.992	Xiphophorus_maculatus