EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000016955 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5499 bases
Position: chrKQ557217.1:2497200-2502698
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022695	MMR_HSR1	PF01926.23	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000022971	-	1110	-	ENSXCOP00000022695	369 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000016955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000016955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000016955	arl13b	51	31.771	ENSXCOG00000004543	arl8bb	97	31.771
ENSXCOG00000016955	arl13b	64	47.034	ENSXCOG00000016270	arl13a	53	47.926
ENSXCOG00000016955	arl13b	51	33.155	ENSXCOG00000016687	-	97	33.155

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000016955	arl13b	99	77.751	ENSAPOG00000013256	arl13b	99	77.751	Acanthochromis_polyacanthus
ENSXCOG00000016955	arl13b	100	79.052	ENSACIG00000017582	arl13b	90	94.931	Amphilophus_citrinellus
ENSXCOG00000016955	arl13b	99	77.751	ENSAOCG00000002828	arl13b	99	77.751	Amphiprion_ocellaris
ENSXCOG00000016955	arl13b	93	76.943	ENSAPEG00000014654	arl13b	99	76.883	Amphiprion_percula
ENSXCOG00000016955	arl13b	99	75.122	ENSATEG00000017586	arl13b	99	74.878	Anabas_testudineus
ENSXCOG00000016955	arl13b	89	75.655	ENSACAG00000000523	ARL13B	80	75.373	Anolis_carolinensis
ENSXCOG00000016955	arl13b	100	83.163	ENSACLG00000024227	arl13b	100	83.163	Astatotilapia_calliptera
ENSXCOG00000016955	arl13b	100	70.073	ENSAMXG00000042824	arl13b	100	69.512	Astyanax_mexicanus
ENSXCOG00000016955	arl13b	95	62.147	ENSCAPG00000006764	ARL13B	94	61.864	Cavia_aperea
ENSXCOG00000016955	arl13b	99	59.474	ENSCPOG00000002558	ARL13B	99	59.474	Cavia_porcellus
ENSXCOG00000016955	arl13b	95	56.553	ENSCLAG00000006379	ARL13B	69	79.695	Chinchilla_lanigera
ENSXCOG00000016955	arl13b	93	73.529	ENSCPBG00000005599	ARL13B	100	56.724	Chrysemys_picta_bellii
ENSXCOG00000016955	arl13b	99	73.839	ENSCSEG00000005258	arl13b	99	74.817	Cynoglossus_semilaevis
ENSXCOG00000016955	arl13b	100	79.512	ENSCVAG00000001545	arl13b	91	98.261	Cyprinodon_variegatus
ENSXCOG00000016955	arl13b	100	72.482	ENSDARG00000012763	arl13b	100	72.482	Danio_rerio
ENSXCOG00000016955	arl13b	73	51.673	ENSEBUG00000006528	arl13b	91	52.045	Eptatretus_burgeri
ENSXCOG00000016955	arl13b	85	73.034	ENSEEUG00000010823	ARL13B	62	79.724	Erinaceus_europaeus
ENSXCOG00000016955	arl13b	85	70.522	ENSFALG00000001654	ARL13B	80	68.284	Ficedula_albicollis
ENSXCOG00000016955	arl13b	93	74.532	ENSFDAG00000006556	ARL13B	70	79.724	Fukomys_damarensis
ENSXCOG00000016955	arl13b	93	79.843	ENSFHEG00000016049	arl13b	99	79.843	Fundulus_heteroclitus
ENSXCOG00000016955	arl13b	95	74.000	ENSGMOG00000018628	arl13b	100	74.000	Gadus_morhua
ENSXCOG00000016955	arl13b	99	85.750	ENSGAFG00000000025	arl13b	85	100.000	Gambusia_affinis
ENSXCOG00000016955	arl13b	99	74.074	ENSGACG00000014228	arl13b	99	74.074	Gasterosteus_aculeatus
ENSXCOG00000016955	arl13b	93	74.545	ENSGAGG00000019336	ARL13B	100	57.282	Gopherus_agassizii
ENSXCOG00000016955	arl13b	100	83.163	ENSHBUG00000020619	arl13b	100	83.163	Haplochromis_burtoni
ENSXCOG00000016955	arl13b	93	74.670	ENSHCOG00000006106	arl13b	99	74.670	Hippocampus_comes
ENSXCOG00000016955	arl13b	99	79.950	ENSKMAG00000001122	arl13b	99	80.198	Kryptolebias_marmoratus
ENSXCOG00000016955	arl13b	99	75.306	ENSLBEG00000014612	arl13b	99	75.306	Labrus_bergylta
ENSXCOG00000016955	arl13b	98	81.985	ENSLOCG00000010465	arl13b	83	81.985	Lepisosteus_oculatus
ENSXCOG00000016955	arl13b	99	76.528	ENSMAMG00000021452	arl13b	99	76.528	Mastacembelus_armatus
ENSXCOG00000016955	arl13b	100	83.163	ENSMZEG00005017827	arl13b	100	83.163	Maylandia_zebra
ENSXCOG00000016955	arl13b	99	81.395	ENSMMOG00000010253	arl13b	99	81.395	Mola_mola
ENSXCOG00000016955	arl13b	99	79.133	ENSMALG00000014655	arl13b	99	78.320	Monopterus_albus
ENSXCOG00000016955	arl13b	100	73.408	MGP_CAROLIEiJ_G0020856	Arl13b	80	79.263	Mus_caroli
ENSXCOG00000016955	arl13b	95	73.408	ENSMUSG00000022911	Arl13b	71	79.263	Mus_musculus
ENSXCOG00000016955	arl13b	95	73.034	MGP_PahariEiJ_G0016561	Arl13b	81	73.034	Mus_pahari
ENSXCOG00000016955	arl13b	95	73.408	MGP_SPRETEiJ_G0021763	Arl13b	89	66.234	Mus_spretus
ENSXCOG00000016955	arl13b	95	53.140	ENSMLUG00000017473	ARL13B	67	80.303	Myotis_lucifugus
ENSXCOG00000016955	arl13b	100	86.523	ENSNBRG00000004078	arl13b	100	86.523	Neolamprologus_brichardi
ENSXCOG00000016955	arl13b	100	55.349	ENSNLEG00000001772	ARL13B	70	76.037	Nomascus_leucogenys
ENSXCOG00000016955	arl13b	86	65.041	ENSMEUG00000008036	-	69	70.408	Notamacropus_eugenii
ENSXCOG00000016955	arl13b	95	72.556	ENSODEG00000011381	ARL13B	70	79.724	Octodon_degus
ENSXCOG00000016955	arl13b	100	64.747	ENSONIG00000001864	arl13b	85	90.074	Oreochromis_niloticus
ENSXCOG00000016955	arl13b	99	78.195	ENSORLG00000006350	arl13b	86	93.548	Oryzias_latipes
ENSXCOG00000016955	arl13b	99	78.283	ENSORLG00020013754	arl13b	99	78.283	Oryzias_latipes_hni
ENSXCOG00000016955	arl13b	99	78.535	ENSORLG00015012586	arl13b	99	78.535	Oryzias_latipes_hsok
ENSXCOG00000016955	arl13b	59	89.862	ENSOMEG00000010187	arl13b	84	89.862	Oryzias_melastigma
ENSXCOG00000016955	arl13b	72	75.836	ENSPSIG00000018115	ARL13B	80	74.812	Pelodiscus_sinensis
ENSXCOG00000016955	arl13b	99	77.363	ENSPMGG00000004584	arl13b	99	77.363	Periophthalmus_magnuspinnatus
ENSXCOG00000016955	arl13b	96	46.172	ENSPCIG00000026984	ARL13B	95	44.498	Phascolarctos_cinereus
ENSXCOG00000016955	arl13b	100	87.781	ENSPFOG00000005379	arl13b	100	87.531	Poecilia_formosa
ENSXCOG00000016955	arl13b	93	86.702	ENSPLAG00000008699	arl13b	99	86.436	Poecilia_latipinna
ENSXCOG00000016955	arl13b	96	86.563	ENSPMEG00000015387	arl13b	99	86.979	Poecilia_mexicana
ENSXCOG00000016955	arl13b	100	86.750	ENSPREG00000006291	arl13b	100	86.500	Poecilia_reticulata
ENSXCOG00000016955	arl13b	95	83.562	ENSPNYG00000022879	arl13b	98	83.562	Pundamilia_nyererei
ENSXCOG00000016955	arl13b	100	71.463	ENSPNAG00000003803	arl13b	100	71.707	Pygocentrus_nattereri
ENSXCOG00000016955	arl13b	61	82.667	ENSSFOG00015005491	arl13b	84	82.870	Scleropages_formosus
ENSXCOG00000016955	arl13b	58	71.296	ENSSFOG00015023057	arl13b	85	71.296	Scleropages_formosus
ENSXCOG00000016955	arl13b	99	75.765	ENSSMAG00000015450	arl13b	99	74.235	Scophthalmus_maximus
ENSXCOG00000016955	arl13b	93	77.403	ENSSDUG00000005560	arl13b	96	77.403	Seriola_dumerili
ENSXCOG00000016955	arl13b	93	77.143	ENSSLDG00000013361	arl13b	99	77.143	Seriola_lalandi_dorsalis
ENSXCOG00000016955	arl13b	99	55.841	ENSSARG00000003872	ARL13B	90	66.445	Sorex_araneus
ENSXCOG00000016955	arl13b	62	80.870	ENSSPUG00000006649	ARL13B	88	80.184	Sphenodon_punctatus
ENSXCOG00000016955	arl13b	96	76.650	ENSSPAG00000016442	arl13b	91	77.157	Stegastes_partitus
ENSXCOG00000016955	arl13b	92	72.119	ENSTGUG00000013493	ARL13B	83	67.286	Taeniopygia_guttata
ENSXCOG00000016955	arl13b	57	73.206	ENSTRUG00000003641	arl13b	74	71.939	Takifugu_rubripes
ENSXCOG00000016955	arl13b	86	63.208	ENSTRUG00000013035	-	98	65.993	Takifugu_rubripes
ENSXCOG00000016955	arl13b	100	55.392	ENSVVUG00000021511	ARL13B	100	53.613	Vulpes_vulpes
ENSXCOG00000016955	arl13b	72	75.940	ENSXETG00000032383	ARL13B	96	75.940	Xenopus_tropicalis
ENSXCOG00000016955	arl13b	57	41.315	ENSXETG00000026166	arl13a	50	41.315	Xenopus_tropicalis
ENSXCOG00000016955	arl13b	99	87.657	ENSXMAG00000002089	arl13b	99	87.798	Xiphophorus_maculatus