EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017043 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 10717 bases
Position: chrKQ557218.1:26232695-26243411
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022811	POP1	PF06978.11	1.2e-38	1	2
ENSXCOP00000022811	POP1	PF06978.11	1.2e-38	2	2
ENSXCOP00000022808	POP1	PF06978.11	1.3e-38	1	2
ENSXCOP00000022808	POP1	PF06978.11	1.3e-38	2	2
ENSXCOP00000022811	POPLD	PF08170.12	2.3e-16	1	1
ENSXCOP00000022808	POPLD	PF08170.12	2.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023087	POP1-202	2826	-	ENSXCOP00000022811	941 (aa)	-	-
ENSXCOT00000023084	POP1-201	2856	-	ENSXCOP00000022808	951 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017043	POP1	100	43.008	ENSG00000104356	POP1	100	43.495	Homo_sapiens
ENSXCOG00000017043	POP1	100	64.464	ENSAPOG00000008198	pop1	100	64.665	Acanthochromis_polyacanthus
ENSXCOG00000017043	POP1	100	43.378	ENSAMEG00000000556	POP1	100	43.378	Ailuropoda_melanoleuca
ENSXCOG00000017043	POP1	100	60.905	ENSACIG00000004169	POP1	100	60.338	Amphilophus_citrinellus
ENSXCOG00000017043	POP1	100	63.755	ENSAOCG00000010991	pop1	100	63.956	Amphiprion_ocellaris
ENSXCOG00000017043	POP1	100	60.518	ENSAPEG00000007607	pop1	100	60.419	Amphiprion_percula
ENSXCOG00000017043	POP1	100	59.783	ENSATEG00000024814	POP1	100	60.870	Anabas_testudineus
ENSXCOG00000017043	POP1	90	46.304	ENSAPLG00000014418	POP1	97	46.389	Anas_platyrhynchos
ENSXCOG00000017043	POP1	100	42.718	ENSACAG00000016083	POP1	100	42.913	Anolis_carolinensis
ENSXCOG00000017043	POP1	88	50.298	ENSANAG00000026360	POP1	100	48.529	Aotus_nancymaae
ENSXCOG00000017043	POP1	100	60.947	ENSACLG00000010951	pop1	100	62.069	Astatotilapia_calliptera
ENSXCOG00000017043	POP1	100	48.733	ENSAMXG00000014483	POP1	100	48.502	Astyanax_mexicanus
ENSXCOG00000017043	POP1	100	44.359	ENSBTAG00000012596	POP1	100	44.573	Bos_taurus
ENSXCOG00000017043	POP1	100	43.298	ENSCJAG00000015567	POP1	100	43.145	Callithrix_jacchus
ENSXCOG00000017043	POP1	100	43.992	ENSCAFG00000000469	POP1	100	43.564	Canis_familiaris
ENSXCOG00000017043	POP1	100	43.037	ENSCAFG00020026765	POP1	100	42.623	Canis_lupus_dingo
ENSXCOG00000017043	POP1	94	46.185	ENSCHIG00000017066	POP1	100	44.081	Capra_hircus
ENSXCOG00000017043	POP1	100	42.830	ENSTSYG00000003097	POP1	100	42.926	Carlito_syrichta
ENSXCOG00000017043	POP1	100	41.954	ENSCAPG00000007251	POP1	100	41.858	Cavia_aperea
ENSXCOG00000017043	POP1	100	42.761	ENSCPOG00000002901	POP1	100	42.610	Cavia_porcellus
ENSXCOG00000017043	POP1	100	43.009	ENSCCAG00000018939	POP1	100	43.064	Cebus_capucinus
ENSXCOG00000017043	POP1	100	43.075	ENSCATG00000040916	POP1	100	42.898	Cercocebus_atys
ENSXCOG00000017043	POP1	100	42.050	ENSCLAG00000007208	POP1	97	42.445	Chinchilla_lanigera
ENSXCOG00000017043	POP1	90	44.872	ENSCSAG00000012340	POP1	98	45.161	Chlorocebus_sabaeus
ENSXCOG00000017043	POP1	79	53.191	ENSCHOG00000011432	POP1	82	53.027	Choloepus_hoffmanni
ENSXCOG00000017043	POP1	100	45.098	ENSCPBG00000006373	POP1	100	45.667	Chrysemys_picta_bellii
ENSXCOG00000017043	POP1	80	33.333	ENSCING00000008323	-	73	32.883	Ciona_intestinalis
ENSXCOG00000017043	POP1	100	43.416	ENSCANG00000001647	POP1	100	43.169	Colobus_angolensis_palliatus
ENSXCOG00000017043	POP1	100	41.356	ENSCGRG00001017308	Pop1	100	41.867	Cricetulus_griseus_chok1gshd
ENSXCOG00000017043	POP1	100	38.484	ENSCGRG00000010824	Pop1	100	39.681	Cricetulus_griseus_crigri
ENSXCOG00000017043	POP1	100	58.425	ENSCSEG00000008737	POP1	100	59.023	Cynoglossus_semilaevis
ENSXCOG00000017043	POP1	100	68.251	ENSCVAG00000022248	pop1	100	68.453	Cyprinodon_variegatus
ENSXCOG00000017043	POP1	53	49.903	ENSDARG00000102087	pop1	98	49.320	Danio_rerio
ENSXCOG00000017043	POP1	100	40.716	ENSDNOG00000019974	POP1	100	40.811	Dasypus_novemcinctus
ENSXCOG00000017043	POP1	100	39.164	ENSDORG00000015384	Pop1	100	39.050	Dipodomys_ordii
ENSXCOG00000017043	POP1	89	44.082	ENSETEG00000007839	POP1	88	44.425	Echinops_telfairi
ENSXCOG00000017043	POP1	100	42.718	ENSEASG00005003189	POP1	98	42.788	Equus_asinus_asinus
ENSXCOG00000017043	POP1	100	42.913	ENSECAG00000024236	POP1	100	43.107	Equus_caballus
ENSXCOG00000017043	POP1	100	53.467	ENSELUG00000003526	pop1	100	54.271	Esox_lucius
ENSXCOG00000017043	POP1	100	43.118	ENSFCAG00000002168	POP1	100	43.118	Felis_catus
ENSXCOG00000017043	POP1	100	42.386	ENSFALG00000005711	POP1	100	43.202	Ficedula_albicollis
ENSXCOG00000017043	POP1	100	41.682	ENSFDAG00000017068	POP1	100	42.131	Fukomys_damarensis
ENSXCOG00000017043	POP1	100	67.951	ENSFHEG00000019518	pop1	100	68.154	Fundulus_heteroclitus
ENSXCOG00000017043	POP1	100	51.680	ENSGMOG00000000659	POP1	100	51.383	Gadus_morhua
ENSXCOG00000017043	POP1	100	80.734	ENSGAFG00000019770	POP1	100	81.244	Gambusia_affinis
ENSXCOG00000017043	POP1	100	56.447	ENSGACG00000003499	pop1	91	60.952	Gasterosteus_aculeatus
ENSXCOG00000017043	POP1	100	44.434	ENSGAGG00000011737	POP1	98	44.596	Gopherus_agassizii
ENSXCOG00000017043	POP1	100	43.158	ENSGGOG00000003176	POP1	100	43.470	Gorilla_gorilla
ENSXCOG00000017043	POP1	100	61.243	ENSHBUG00000021583	pop1	100	62.365	Haplochromis_burtoni
ENSXCOG00000017043	POP1	100	41.794	ENSHGLG00000006029	POP1	100	42.146	Heterocephalus_glaber_female
ENSXCOG00000017043	POP1	100	41.794	ENSHGLG00100016879	POP1	100	42.146	Heterocephalus_glaber_male
ENSXCOG00000017043	POP1	90	57.424	ENSHCOG00000013888	pop1	100	54.121	Hippocampus_comes
ENSXCOG00000017043	POP1	100	49.323	ENSIPUG00000018336	pop1	100	48.891	Ictalurus_punctatus
ENSXCOG00000017043	POP1	100	42.517	ENSSTOG00000011455	POP1	97	41.920	Ictidomys_tridecemlineatus
ENSXCOG00000017043	POP1	100	42.395	ENSJJAG00000013325	Pop1	100	42.424	Jaculus_jaculus
ENSXCOG00000017043	POP1	100	64.242	ENSKMAG00000001346	POP1	100	64.604	Kryptolebias_marmoratus
ENSXCOG00000017043	POP1	100	57.563	ENSLBEG00000024457	POP1	100	56.650	Labrus_bergylta
ENSXCOG00000017043	POP1	90	46.227	ENSLACG00000012498	POP1	95	46.452	Latimeria_chalumnae
ENSXCOG00000017043	POP1	100	48.783	ENSLOCG00000009817	POP1	100	49.371	Lepisosteus_oculatus
ENSXCOG00000017043	POP1	100	43.462	ENSLAFG00000010770	POP1	100	43.768	Loxodonta_africana
ENSXCOG00000017043	POP1	100	42.912	ENSMFAG00000000347	POP1	100	42.654	Macaca_fascicularis
ENSXCOG00000017043	POP1	100	42.667	ENSMNEG00000036870	POP1	100	42.614	Macaca_nemestrina
ENSXCOG00000017043	POP1	100	42.952	ENSMLEG00000034986	POP1	100	42.898	Mandrillus_leucophaeus
ENSXCOG00000017043	POP1	100	61.233	ENSMAMG00000004040	pop1	100	61.239	Mastacembelus_armatus
ENSXCOG00000017043	POP1	100	60.947	ENSMZEG00005025448	pop1	100	62.069	Maylandia_zebra
ENSXCOG00000017043	POP1	100	42.749	ENSMGAG00000012167	POP1	100	42.966	Meleagris_gallopavo
ENSXCOG00000017043	POP1	100	42.486	ENSMAUG00000017537	Pop1	100	42.150	Mesocricetus_auratus
ENSXCOG00000017043	POP1	100	42.653	ENSMICG00000004361	POP1	100	42.653	Microcebus_murinus
ENSXCOG00000017043	POP1	100	42.490	ENSMOCG00000006356	Pop1	100	42.490	Microtus_ochrogaster
ENSXCOG00000017043	POP1	100	58.394	ENSMMOG00000018242	pop1	100	58.108	Mola_mola
ENSXCOG00000017043	POP1	100	41.491	ENSMODG00000006561	POP1	100	41.683	Monodelphis_domestica
ENSXCOG00000017043	POP1	100	60.521	ENSMALG00000012621	POP1	100	60.521	Monopterus_albus
ENSXCOG00000017043	POP1	100	40.896	MGP_CAROLIEiJ_G0019726	Pop1	100	41.356	Mus_caroli
ENSXCOG00000017043	POP1	100	40.801	ENSMUSG00000022325	Pop1	100	40.822	Mus_musculus
ENSXCOG00000017043	POP1	100	40.492	MGP_PahariEiJ_G0019735	Pop1	100	41.160	Mus_pahari
ENSXCOG00000017043	POP1	100	40.631	MGP_SPRETEiJ_G0020622	Pop1	100	40.822	Mus_spretus
ENSXCOG00000017043	POP1	100	43.462	ENSMPUG00000015250	POP1	100	43.462	Mustela_putorius_furo
ENSXCOG00000017043	POP1	100	41.948	ENSMLUG00000010204	POP1	100	41.456	Myotis_lucifugus
ENSXCOG00000017043	POP1	100	42.120	ENSNGAG00000001582	Pop1	100	42.241	Nannospalax_galili
ENSXCOG00000017043	POP1	100	60.776	ENSNBRG00000002356	pop1	100	60.061	Neolamprologus_brichardi
ENSXCOG00000017043	POP1	100	43.816	ENSNLEG00000002541	POP1	100	43.305	Nomascus_leucogenys
ENSXCOG00000017043	POP1	74	52.866	ENSMEUG00000003118	POP1	76	52.303	Notamacropus_eugenii
ENSXCOG00000017043	POP1	100	42.816	ENSOPRG00000007667	POP1	100	42.816	Ochotona_princeps
ENSXCOG00000017043	POP1	100	42.389	ENSODEG00000003984	POP1	100	42.456	Octodon_degus
ENSXCOG00000017043	POP1	100	61.178	ENSONIG00000016445	pop1	100	62.365	Oreochromis_niloticus
ENSXCOG00000017043	POP1	63	38.142	ENSOANG00000001278	-	94	40.351	Ornithorhynchus_anatinus
ENSXCOG00000017043	POP1	100	43.186	ENSOCUG00000017400	POP1	100	43.186	Oryctolagus_cuniculus
ENSXCOG00000017043	POP1	100	60.674	ENSORLG00000002839	pop1	100	61.044	Oryzias_latipes
ENSXCOG00000017043	POP1	100	58.391	ENSORLG00020022450	POP1	100	58.093	Oryzias_latipes_hni
ENSXCOG00000017043	POP1	100	60.732	ENSORLG00015012746	POP1	100	61.245	Oryzias_latipes_hsok
ENSXCOG00000017043	POP1	100	59.714	ENSOMEG00000006915	pop1	99	60.532	Oryzias_melastigma
ENSXCOG00000017043	POP1	100	41.898	ENSOGAG00000001466	POP1	100	42.486	Otolemur_garnettii
ENSXCOG00000017043	POP1	100	43.308	ENSPPAG00000018410	POP1	100	43.590	Pan_paniscus
ENSXCOG00000017043	POP1	100	42.885	ENSPPRG00000005002	POP1	100	43.228	Panthera_pardus
ENSXCOG00000017043	POP1	100	43.077	ENSPTIG00000016527	POP1	100	43.324	Panthera_tigris_altaica
ENSXCOG00000017043	POP1	100	43.008	ENSPTRG00000020458	POP1	100	43.495	Pan_troglodytes
ENSXCOG00000017043	POP1	100	43.251	ENSPANG00000009704	POP1	100	42.992	Papio_anubis
ENSXCOG00000017043	POP1	100	51.878	ENSPKIG00000016325	POP1	100	52.284	Paramormyrops_kingsleyae
ENSXCOG00000017043	POP1	100	44.358	ENSPSIG00000012343	POP1	100	44.553	Pelodiscus_sinensis
ENSXCOG00000017043	POP1	100	55.932	ENSPMGG00000022253	POP1	100	56.132	Periophthalmus_magnuspinnatus
ENSXCOG00000017043	POP1	99	41.531	ENSPEMG00000023633	Pop1	100	41.092	Peromyscus_maniculatus_bairdii
ENSXCOG00000017043	POP1	90	39.305	ENSPMAG00000003209	POP1	99	39.532	Petromyzon_marinus
ENSXCOG00000017043	POP1	100	41.160	ENSPCIG00000012216	POP1	100	41.160	Phascolarctos_cinereus
ENSXCOG00000017043	POP1	100	79.349	ENSPFOG00000012490	POP1	100	80.061	Poecilia_formosa
ENSXCOG00000017043	POP1	100	79.247	ENSPLAG00000004646	POP1	100	79.959	Poecilia_latipinna
ENSXCOG00000017043	POP1	100	79.451	ENSPMEG00000019592	POP1	100	80.163	Poecilia_mexicana
ENSXCOG00000017043	POP1	100	78.942	ENSPREG00000020951	POP1	100	79.654	Poecilia_reticulata
ENSXCOG00000017043	POP1	100	43.075	ENSPPYG00000018777	POP1	100	42.992	Pongo_abelii
ENSXCOG00000017043	POP1	100	40.730	ENSPCAG00000016662	POP1	100	39.924	Procavia_capensis
ENSXCOG00000017043	POP1	100	42.775	ENSPCOG00000019420	POP1	100	42.775	Propithecus_coquereli
ENSXCOG00000017043	POP1	100	42.788	ENSPVAG00000014468	POP1	100	43.587	Pteropus_vampyrus
ENSXCOG00000017043	POP1	100	61.026	ENSPNYG00000004476	pop1	100	61.128	Pundamilia_nyererei
ENSXCOG00000017043	POP1	100	48.743	ENSPNAG00000000265	pop1	100	48.743	Pygocentrus_nattereri
ENSXCOG00000017043	POP1	100	42.264	ENSRNOG00000005243	Pop1	100	41.659	Rattus_norvegicus
ENSXCOG00000017043	POP1	100	43.295	ENSRBIG00000007996	POP1	100	43.210	Rhinopithecus_bieti
ENSXCOG00000017043	POP1	100	43.565	ENSRROG00000012334	POP1	100	43.210	Rhinopithecus_roxellana
ENSXCOG00000017043	POP1	90	45.455	ENSSBOG00000020830	POP1	90	45.405	Saimiri_boliviensis_boliviensis
ENSXCOG00000017043	POP1	100	41.053	ENSSHAG00000000296	POP1	100	41.053	Sarcophilus_harrisii
ENSXCOG00000017043	POP1	100	51.908	ENSSFOG00015007429	pop1	99	51.707	Scleropages_formosus
ENSXCOG00000017043	POP1	100	61.303	ENSSMAG00000010467	POP1	100	61.507	Scophthalmus_maximus
ENSXCOG00000017043	POP1	100	62.340	ENSSDUG00000007817	POP1	100	62.537	Seriola_dumerili
ENSXCOG00000017043	POP1	100	62.340	ENSSLDG00000012565	POP1	100	62.537	Seriola_lalandi_dorsalis
ENSXCOG00000017043	POP1	100	40.665	ENSSPUG00000003550	-	100	40.953	Sphenodon_punctatus
ENSXCOG00000017043	POP1	100	64.315	ENSSPAG00000014955	pop1	100	64.110	Stegastes_partitus
ENSXCOG00000017043	POP1	100	43.275	ENSSSCG00000006078	POP1	100	43.275	Sus_scrofa
ENSXCOG00000017043	POP1	90	40.773	ENSTGUG00000012011	-	97	40.693	Taeniopygia_guttata
ENSXCOG00000017043	POP1	100	60.305	ENSTRUG00000010856	pop1	100	59.797	Takifugu_rubripes
ENSXCOG00000017043	POP1	95	58.793	ENSTNIG00000013297	pop1	95	60.596	Tetraodon_nigroviridis
ENSXCOG00000017043	POP1	90	41.631	ENSTBEG00000014214	POP1	93	41.739	Tupaia_belangeri
ENSXCOG00000017043	POP1	100	41.836	ENSTTRG00000016071	POP1	100	41.635	Tursiops_truncatus
ENSXCOG00000017043	POP1	99	44.051	ENSUAMG00000017309	POP1	100	44.051	Ursus_americanus
ENSXCOG00000017043	POP1	100	42.966	ENSUMAG00000016952	POP1	100	46.992	Ursus_maritimus
ENSXCOG00000017043	POP1	85	50.362	ENSVPAG00000008278	POP1	80	50.362	Vicugna_pacos
ENSXCOG00000017043	POP1	100	43.037	ENSVVUG00000010994	POP1	100	42.623	Vulpes_vulpes
ENSXCOG00000017043	POP1	100	86.035	ENSXMAG00000002472	POP1	100	86.035	Xiphophorus_maculatus