EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017087 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1572 bases
Position: chrKQ557204.1:16532668-16534239
Accession: ZDB-GENE-060526-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022871	Glu-tRNAGln	PF02686.15	4.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023147	-	414	-	ENSXCOP00000022871	137 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017087	gatc	73	63.000	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSXCOG00000017087	gatc	73	64.000	ENSAMEG00000013298	-	74	64.000	Ailuropoda_melanoleuca
ENSXCOG00000017087	gatc	72	79.798	ENSACIG00000016853	gatc	71	79.798	Amphilophus_citrinellus
ENSXCOG00000017087	gatc	82	88.393	ENSAOCG00000014641	gatc	90	88.393	Amphiprion_ocellaris
ENSXCOG00000017087	gatc	82	87.500	ENSAPEG00000023411	gatc	57	87.500	Amphiprion_percula
ENSXCOG00000017087	gatc	67	90.217	ENSATEG00000009237	gatc	76	90.217	Anabas_testudineus
ENSXCOG00000017087	gatc	69	78.947	ENSACAG00000002868	-	70	78.947	Anolis_carolinensis
ENSXCOG00000017087	gatc	73	64.000	ENSANAG00000034389	-	74	64.000	Aotus_nancymaae
ENSXCOG00000017087	gatc	81	82.883	ENSACLG00000026251	gatc	58	82.883	Astatotilapia_calliptera
ENSXCOG00000017087	gatc	73	60.000	ENSBTAG00000012791	GATC	74	60.000	Bos_taurus
ENSXCOG00000017087	gatc	72	39.796	WBGene00013433	Y66D12A.7	56	39.796	Caenorhabditis_elegans
ENSXCOG00000017087	gatc	93	56.154	ENSCJAG00000001183	-	71	56.154	Callithrix_jacchus
ENSXCOG00000017087	gatc	93	54.545	ENSCAFG00000010311	-	96	54.545	Canis_familiaris
ENSXCOG00000017087	gatc	93	54.545	ENSCAFG00020020606	-	96	54.545	Canis_lupus_dingo
ENSXCOG00000017087	gatc	77	57.547	ENSCHIG00000019423	-	78	57.547	Capra_hircus
ENSXCOG00000017087	gatc	93	54.615	ENSTSYG00000006845	-	96	54.615	Carlito_syrichta
ENSXCOG00000017087	gatc	65	64.045	ENSCPOG00000026436	-	61	64.045	Cavia_porcellus
ENSXCOG00000017087	gatc	93	55.385	ENSCCAG00000022235	-	96	55.385	Cebus_capucinus
ENSXCOG00000017087	gatc	73	63.000	ENSCATG00000038807	GATC	74	63.000	Cercocebus_atys
ENSXCOG00000017087	gatc	70	62.500	ENSCLAG00000011015	-	60	62.500	Chinchilla_lanigera
ENSXCOG00000017087	gatc	73	64.000	ENSCSAG00000002259	GATC	74	64.000	Chlorocebus_sabaeus
ENSXCOG00000017087	gatc	73	63.000	ENSCHOG00000009235	-	74	63.000	Choloepus_hoffmanni
ENSXCOG00000017087	gatc	79	68.519	ENSCPBG00000011342	-	58	68.519	Chrysemys_picta_bellii
ENSXCOG00000017087	gatc	84	56.897	ENSCANG00000031071	GATC	85	56.897	Colobus_angolensis_palliatus
ENSXCOG00000017087	gatc	82	56.140	ENSCGRG00001019220	-	74	56.140	Cricetulus_griseus_chok1gshd
ENSXCOG00000017087	gatc	82	56.140	ENSCGRG00000004184	-	74	56.140	Cricetulus_griseus_crigri
ENSXCOG00000017087	gatc	82	74.107	ENSCSEG00000016618	-	65	74.107	Cynoglossus_semilaevis
ENSXCOG00000017087	gatc	80	79.817	ENSCSEG00000007798	gatc	55	79.817	Cynoglossus_semilaevis
ENSXCOG00000017087	gatc	81	96.396	ENSCVAG00000004364	gatc	59	96.396	Cyprinodon_variegatus
ENSXCOG00000017087	gatc	80	80.000	ENSDARG00000056855	gatc	60	80.000	Danio_rerio
ENSXCOG00000017087	gatc	72	62.626	ENSDNOG00000012593	-	55	62.222	Dasypus_novemcinctus
ENSXCOG00000017087	gatc	72	43.220	FBgn0064115	GatC	80	43.220	Drosophila_melanogaster
ENSXCOG00000017087	gatc	72	53.535	ENSETEG00000002604	-	73	53.535	Echinops_telfairi
ENSXCOG00000017087	gatc	71	51.546	ENSEBUG00000008772	gatc	55	51.546	Eptatretus_burgeri
ENSXCOG00000017087	gatc	73	65.000	ENSECAG00000011118	-	74	65.000	Equus_caballus
ENSXCOG00000017087	gatc	83	53.509	ENSEEUG00000011638	-	84	53.509	Erinaceus_europaeus
ENSXCOG00000017087	gatc	72	79.798	ENSELUG00000012608	gatc	72	79.798	Esox_lucius
ENSXCOG00000017087	gatc	73	64.000	ENSFCAG00000038718	-	74	64.000	Felis_catus
ENSXCOG00000017087	gatc	90	59.350	ENSFALG00000007564	-	81	59.350	Ficedula_albicollis
ENSXCOG00000017087	gatc	89	59.350	ENSFDAG00000018720	-	90	59.350	Fukomys_damarensis
ENSXCOG00000017087	gatc	81	94.595	ENSFHEG00000014992	GATC	60	94.595	Fundulus_heteroclitus
ENSXCOG00000017087	gatc	81	73.874	ENSGMOG00000008742	gatc	69	73.874	Gadus_morhua
ENSXCOG00000017087	gatc	77	62.264	ENSGALG00000007195	-	76	62.264	Gallus_gallus
ENSXCOG00000017087	gatc	74	93.069	ENSGAFG00000012801	gatc	59	97.849	Gambusia_affinis
ENSXCOG00000017087	gatc	81	86.486	ENSGACG00000008973	gatc	57	86.486	Gasterosteus_aculeatus
ENSXCOG00000017087	gatc	79	69.444	ENSGAGG00000016018	-	59	69.444	Gopherus_agassizii
ENSXCOG00000017087	gatc	77	56.604	ENSGGOG00000026821	GATC	82	56.604	Gorilla_gorilla
ENSXCOG00000017087	gatc	81	83.784	ENSHBUG00000006827	gatc	58	83.784	Haplochromis_burtoni
ENSXCOG00000017087	gatc	89	57.724	ENSHGLG00000011394	GATC	90	57.724	Heterocephalus_glaber_female
ENSXCOG00000017087	gatc	89	56.098	ENSHGLG00100018850	-	89	56.098	Heterocephalus_glaber_male
ENSXCOG00000017087	gatc	81	80.180	ENSHCOG00000009209	gatc	84	83.962	Hippocampus_comes
ENSXCOG00000017087	gatc	82	79.464	ENSIPUG00000023072	gatc	61	74.380	Ictalurus_punctatus
ENSXCOG00000017087	gatc	73	63.000	ENSSTOG00000025740	-	65	63.000	Ictidomys_tridecemlineatus
ENSXCOG00000017087	gatc	70	63.542	ENSJJAG00000000369	Gatc	61	63.542	Jaculus_jaculus
ENSXCOG00000017087	gatc	78	83.178	ENSKMAG00000016476	gatc	85	83.178	Kryptolebias_marmoratus
ENSXCOG00000017087	gatc	81	83.784	ENSLBEG00000007603	gatc	61	83.784	Labrus_bergylta
ENSXCOG00000017087	gatc	81	63.063	ENSLACG00000018239	-	58	63.063	Latimeria_chalumnae
ENSXCOG00000017087	gatc	81	73.874	ENSLOCG00000004056	gatc	60	73.874	Lepisosteus_oculatus
ENSXCOG00000017087	gatc	79	57.798	ENSLAFG00000006384	-	71	57.798	Loxodonta_africana
ENSXCOG00000017087	gatc	73	63.000	ENSMFAG00000034197	GATC	74	63.000	Macaca_fascicularis
ENSXCOG00000017087	gatc	73	63.000	ENSMMUG00000046665	GATC	74	63.000	Macaca_mulatta
ENSXCOG00000017087	gatc	73	63.000	ENSMNEG00000034653	GATC	74	63.000	Macaca_nemestrina
ENSXCOG00000017087	gatc	73	64.000	ENSMLEG00000039862	GATC	74	64.000	Mandrillus_leucophaeus
ENSXCOG00000017087	gatc	81	89.189	ENSMAMG00000015851	gatc	61	89.189	Mastacembelus_armatus
ENSXCOG00000017087	gatc	81	82.883	ENSMZEG00005016072	gatc	58	82.883	Maylandia_zebra
ENSXCOG00000017087	gatc	86	61.017	ENSMGAG00000008733	-	100	64.151	Meleagris_gallopavo
ENSXCOG00000017087	gatc	82	57.895	ENSMAUG00000012756	Gatc	74	57.895	Mesocricetus_auratus
ENSXCOG00000017087	gatc	73	64.000	ENSMICG00000008669	-	74	64.000	Microcebus_murinus
ENSXCOG00000017087	gatc	82	57.018	ENSMOCG00000005051	Gatc	74	57.018	Microtus_ochrogaster
ENSXCOG00000017087	gatc	84	77.391	ENSMMOG00000017695	gatc	96	77.391	Mola_mola
ENSXCOG00000017087	gatc	90	52.756	ENSMODG00000003152	-	96	52.756	Monodelphis_domestica
ENSXCOG00000017087	gatc	69	63.158	MGP_CAROLIEiJ_G0027623	Gatc	61	63.158	Mus_caroli
ENSXCOG00000017087	gatc	69	63.158	ENSMUSG00000029536	Gatc	61	63.158	Mus_musculus
ENSXCOG00000017087	gatc	82	57.895	MGP_PahariEiJ_G0024203	Gatc	74	57.895	Mus_pahari
ENSXCOG00000017087	gatc	69	62.105	MGP_SPRETEiJ_G0028621	Gatc	61	62.105	Mus_spretus
ENSXCOG00000017087	gatc	73	65.000	ENSMPUG00000003183	-	74	65.000	Mustela_putorius_furo
ENSXCOG00000017087	gatc	69	61.053	ENSMLUG00000010341	-	94	61.053	Myotis_lucifugus
ENSXCOG00000017087	gatc	68	63.441	ENSNGAG00000004734	Gatc	61	63.441	Nannospalax_galili
ENSXCOG00000017087	gatc	81	83.784	ENSNBRG00000007810	gatc	58	83.784	Neolamprologus_brichardi
ENSXCOG00000017087	gatc	84	57.759	ENSNLEG00000015651	GATC	85	57.759	Nomascus_leucogenys
ENSXCOG00000017087	gatc	73	62.000	ENSMEUG00000004064	-	81	62.000	Notamacropus_eugenii
ENSXCOG00000017087	gatc	93	55.725	ENSOPRG00000004226	-	96	55.725	Ochotona_princeps
ENSXCOG00000017087	gatc	86	52.800	ENSODEG00000005919	-	91	52.800	Octodon_degus
ENSXCOG00000017087	gatc	81	81.416	ENSONIG00000013444	gatc	78	81.416	Oreochromis_niloticus
ENSXCOG00000017087	gatc	73	65.000	ENSOCUG00000009867	-	74	65.000	Oryctolagus_cuniculus
ENSXCOG00000017087	gatc	85	77.778	ENSORLG00000007156	gatc	90	82.828	Oryzias_latipes
ENSXCOG00000017087	gatc	81	81.081	ENSORLG00020014991	gatc	59	81.081	Oryzias_latipes_hni
ENSXCOG00000017087	gatc	81	81.081	ENSORLG00015003450	gatc	59	81.081	Oryzias_latipes_hsok
ENSXCOG00000017087	gatc	100	67.883	ENSOMEG00000002280	gatc	73	67.883	Oryzias_melastigma
ENSXCOG00000017087	gatc	76	61.538	ENSOGAG00000003850	-	95	61.538	Otolemur_garnettii
ENSXCOG00000017087	gatc	77	57.547	ENSOARG00000012338	-	82	57.547	Ovis_aries
ENSXCOG00000017087	gatc	73	63.000	ENSPPAG00000029164	GATC	74	63.000	Pan_paniscus
ENSXCOG00000017087	gatc	73	64.000	ENSPPRG00000000929	-	74	64.000	Panthera_pardus
ENSXCOG00000017087	gatc	73	64.000	ENSPTIG00000009889	-	74	64.000	Panthera_tigris_altaica
ENSXCOG00000017087	gatc	73	63.000	ENSPTRG00000049887	GATC	74	63.000	Pan_troglodytes
ENSXCOG00000017087	gatc	73	62.000	ENSPANG00000033975	GATC	74	62.000	Papio_anubis
ENSXCOG00000017087	gatc	81	73.874	ENSPKIG00000024856	gatc	57	73.874	Paramormyrops_kingsleyae
ENSXCOG00000017087	gatc	77	68.571	ENSPSIG00000011112	-	90	68.571	Pelodiscus_sinensis
ENSXCOG00000017087	gatc	81	82.883	ENSPMGG00000018829	gatc	71	82.883	Periophthalmus_magnuspinnatus
ENSXCOG00000017087	gatc	69	65.957	ENSPEMG00000000665	Gatc	61	65.957	Peromyscus_maniculatus_bairdii
ENSXCOG00000017087	gatc	66	63.333	ENSPCIG00000025999	-	58	63.333	Phascolarctos_cinereus
ENSXCOG00000017087	gatc	82	97.321	ENSPFOG00000011603	gatc	61	97.321	Poecilia_formosa
ENSXCOG00000017087	gatc	82	96.429	ENSPLAG00000002471	gatc	61	96.429	Poecilia_latipinna
ENSXCOG00000017087	gatc	82	96.429	ENSPMEG00000020958	gatc	61	96.429	Poecilia_mexicana
ENSXCOG00000017087	gatc	81	96.396	ENSPREG00000022256	gatc	75	96.396	Poecilia_reticulata
ENSXCOG00000017087	gatc	78	61.682	ENSPPYG00000005030	GATC	78	61.682	Pongo_abelii
ENSXCOG00000017087	gatc	73	62.000	ENSPCAG00000013864	-	74	62.000	Procavia_capensis
ENSXCOG00000017087	gatc	66	63.333	ENSPCOG00000009493	-	70	63.333	Propithecus_coquereli
ENSXCOG00000017087	gatc	65	60.674	ENSPCOG00000015558	-	69	60.674	Propithecus_coquereli
ENSXCOG00000017087	gatc	81	59.821	ENSPVAG00000002228	-	83	59.821	Pteropus_vampyrus
ENSXCOG00000017087	gatc	81	83.784	ENSPNYG00000016015	gatc	58	83.784	Pundamilia_nyererei
ENSXCOG00000017087	gatc	85	75.862	ENSPNAG00000001239	gatc	52	75.862	Pygocentrus_nattereri
ENSXCOG00000017087	gatc	69	65.263	ENSRNOG00000001161	Gatc	61	65.263	Rattus_norvegicus
ENSXCOG00000017087	gatc	68	62.366	ENSRNOG00000045621	Gatc	61	62.366	Rattus_norvegicus
ENSXCOG00000017087	gatc	84	56.034	ENSRBIG00000033363	GATC	85	56.034	Rhinopithecus_bieti
ENSXCOG00000017087	gatc	84	56.034	ENSRROG00000042802	GATC	85	56.034	Rhinopithecus_roxellana
ENSXCOG00000017087	gatc	93	54.615	ENSSBOG00000033750	-	96	54.615	Saimiri_boliviensis_boliviensis
ENSXCOG00000017087	gatc	77	59.434	ENSSHAG00000005745	-	100	59.434	Sarcophilus_harrisii
ENSXCOG00000017087	gatc	83	78.070	ENSSFOG00015002508	gatc	60	78.070	Scleropages_formosus
ENSXCOG00000017087	gatc	81	90.090	ENSSMAG00000014280	gatc	62	90.090	Scophthalmus_maximus
ENSXCOG00000017087	gatc	81	87.387	ENSSDUG00000012206	gatc	57	87.387	Seriola_dumerili
ENSXCOG00000017087	gatc	81	87.387	ENSSLDG00000025159	gatc	56	87.387	Seriola_lalandi_dorsalis
ENSXCOG00000017087	gatc	83	57.377	ENSSPUG00000015693	-	72	66.667	Sphenodon_punctatus
ENSXCOG00000017087	gatc	81	87.387	ENSSPAG00000011860	gatc	58	87.387	Stegastes_partitus
ENSXCOG00000017087	gatc	86	57.500	ENSSSCG00000032747	-	88	57.500	Sus_scrofa
ENSXCOG00000017087	gatc	78	67.290	ENSTGUG00000009561	-	99	67.290	Taeniopygia_guttata
ENSXCOG00000017087	gatc	80	86.364	ENSTRUG00000021596	gatc	56	86.364	Takifugu_rubripes
ENSXCOG00000017087	gatc	80	83.486	ENSTNIG00000015879	gatc	53	83.486	Tetraodon_nigroviridis
ENSXCOG00000017087	gatc	73	64.000	ENSTTRG00000000144	GATC	74	64.000	Tursiops_truncatus
ENSXCOG00000017087	gatc	73	65.000	ENSUAMG00000015523	-	74	65.000	Ursus_americanus
ENSXCOG00000017087	gatc	93	54.545	ENSVVUG00000021055	-	96	54.545	Vulpes_vulpes
ENSXCOG00000017087	gatc	82	99.107	ENSXMAG00000018267	gatc	61	99.107	Xiphophorus_maculatus