EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017187 (Gene tree)
Gene ID: -
Gene Symbol: znf385c
Alias: si:dkey-26l17.1
Full Name: zinc finger protein 385C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4676 bases
Position: chrKQ557208.1:18645371-18650046
Accession: ZDB-GENE-091112-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000022996	zf-met	PF12874.7	2e-08	1	1
ENSXCOP00000022996	zf-C2H2_jaz	PF12171.8	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023273	-	633	-	ENSXCOP00000022996	210 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017187	znf385c	100	37.387	ENSXCOG00000001430	znf385a	58	38.565
ENSXCOG00000017187	znf385c	100	35.047	ENSXCOG00000020124	ZNF385D	59	38.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017187	znf385c	100	46.296	ENSG00000187595	ZNF385C	100	45.545	Homo_sapiens
ENSXCOG00000017187	znf385c	100	96.682	ENSACIG00000010548	znf385c	55	96.682	Amphilophus_citrinellus
ENSXCOG00000017187	znf385c	100	93.897	ENSAOCG00000012241	znf385c	50	93.897	Amphiprion_ocellaris
ENSXCOG00000017187	znf385c	99	80.861	ENSDARG00000058154	znf385c	100	80.861	Danio_rerio
ENSXCOG00000017187	znf385c	83	43.503	ENSETEG00000018956	-	88	43.889	Echinops_telfairi
ENSXCOG00000017187	znf385c	67	46.154	ENSEEUG00000002653	-	95	46.154	Erinaceus_europaeus
ENSXCOG00000017187	znf385c	100	48.165	ENSGMOG00000000733	-	88	48.165	Gadus_morhua
ENSXCOG00000017187	znf385c	100	49.074	ENSGACG00000006211	-	89	49.074	Gasterosteus_aculeatus
ENSXCOG00000017187	znf385c	100	42.056	ENSIPUG00000021578	-	64	41.038	Ictalurus_punctatus
ENSXCOG00000017187	znf385c	100	85.782	ENSNBRG00000018835	znf385c	54	85.782	Neolamprologus_brichardi
ENSXCOG00000017187	znf385c	100	44.393	ENSMEUG00000016616	ZNF385C	51	47.222	Notamacropus_eugenii
ENSXCOG00000017187	znf385c	100	46.759	ENSPPAG00000042977	ZNF385C	51	46.544	Pan_paniscus
ENSXCOG00000017187	znf385c	100	41.593	ENSPMAG00000000983	znf385c	52	41.593	Petromyzon_marinus
ENSXCOG00000017187	znf385c	100	44.651	ENSPCAG00000015851	ZNF385C	51	46.512	Procavia_capensis
ENSXCOG00000017187	znf385c	100	78.095	ENSPNAG00000028718	znf385c	51	78.095	Pygocentrus_nattereri
ENSXCOG00000017187	znf385c	100	44.954	ENSRNOG00000025370	Zfp385c	51	44.954	Rattus_norvegicus
ENSXCOG00000017187	znf385c	100	79.717	ENSTRUG00000015771	znf385c	50	79.717	Takifugu_rubripes
ENSXCOG00000017187	znf385c	94	45.771	ENSTNIG00000005317	-	97	50.000	Tetraodon_nigroviridis
ENSXCOG00000017187	znf385c	93	44.000	ENSTBEG00000005161	-	100	44.724	Tupaia_belangeri