EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000017324 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
8934 bases
Position
chrKQ557213.1:4747041-4755974
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000023186RRM_1PF00076.227.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000023464-663-ENSXCOP00000023186220 (aa)--
Gene Model
Click here to download ENSXCOG00000017324's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017324's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000017324-5382.051ENSXCOG00000019779rbm24b5471.875
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000017324-5585.124ENSG00000132819RBM389485.124Homo_sapiens
ENSXCOG00000017324-6882.803ENSAPOG00000009939-7976.536Acanthochromis_polyacanthus
ENSXCOG00000017324-9954.709ENSAPOG00000003301rbm388454.709Acanthochromis_polyacanthus
ENSXCOG00000017324-6275.000ENSACIG00000000010rbm385175.000Amphilophus_citrinellus
ENSXCOG00000017324-7379.769ENSACIG00000012502-10087.692Amphilophus_citrinellus
ENSXCOG00000017324-9954.709ENSAOCG00000013497-8454.709Amphiprion_ocellaris
ENSXCOG00000017324-6290.441ENSAOCG00000012559RBM387376.536Amphiprion_ocellaris
ENSXCOG00000017324-9954.709ENSAPEG00000013137rbm388556.338Amphiprion_percula
ENSXCOG00000017324-6290.441ENSAPEG00000023581-7176.536Amphiprion_percula
ENSXCOG00000017324-6882.803ENSATEG00000016710-6977.273Anabas_testudineus
ENSXCOG00000017324-6273.529ENSATEG00000016366rbm385376.154Anabas_testudineus
ENSXCOG00000017324-6078.947ENSANAG00000031959RBM387895.745Aotus_nancymaae
ENSXCOG00000017324-6883.974ENSACLG00000019514-7177.528Astatotilapia_calliptera
ENSXCOG00000017324-6867.308ENSAMXG00000038120rbm386467.308Astyanax_mexicanus
ENSXCOG00000017324-7971.351ENSAMXG00000015601-7671.351Astyanax_mexicanus
ENSXCOG00000017324-6062.774WBGene00006321sup-128265.625Caenorhabditis_elegans
ENSXCOG00000017324-6079.699ENSCJAG00000019139RBM387895.745Callithrix_jacchus
ENSXCOG00000017324-6077.444ENSCHIG00000002609RBM385077.444Capra_hircus
ENSXCOG00000017324-6079.699ENSCCAG00000036872RBM387895.745Cebus_capucinus
ENSXCOG00000017324-6078.947ENSCATG00000032133RBM387895.745Cercocebus_atys
ENSXCOG00000017324-6078.947ENSCSAG00000015503RBM385478.947Chlorocebus_sabaeus
ENSXCOG00000017324-6076.087ENSCPBG00000024059RBM386276.087Chrysemys_picta_bellii
ENSXCOG00000017324-6457.857ENSCANG00000030105-5457.343Colobus_angolensis_palliatus
ENSXCOG00000017324-6077.444ENSCGRG00001012928Rbm385477.444Cricetulus_griseus_chok1gshd
ENSXCOG00000017324-6881.410ENSCSEG00000004701-7175.281Cynoglossus_semilaevis
ENSXCOG00000017324-6067.669ENSCSEG00000020943rbm385556.667Cynoglossus_semilaevis
ENSXCOG00000017324-6175.373ENSCVAG00000015952rbm388254.751Cyprinodon_variegatus
ENSXCOG00000017324-6887.898ENSCVAG00000005472-8273.558Cyprinodon_variegatus
ENSXCOG00000017324-8763.547ENSDARG00000058818rbm388463.547Danio_rerio
ENSXCOG00000017324-6077.444ENSDNOG00000032004RBM386177.444Dasypus_novemcinctus
ENSXCOG00000017324-6882.692ENSELUG00000005849-7375.141Esox_lucius
ENSXCOG00000017324-5684.553ENSELUG00000000585-5284.553Esox_lucius
ENSXCOG00000017324-5386.325ENSFCAG00000042916RBM387894.681Felis_catus
ENSXCOG00000017324-5484.746ENSFALG00000010805RBM385984.746Ficedula_albicollis
ENSXCOG00000017324-9470.776ENSFHEG00000006160-9470.776Fundulus_heteroclitus
ENSXCOG00000017324-6274.265ENSFHEG00000017748rbm385274.265Fundulus_heteroclitus
ENSXCOG00000017324-5983.824ENSGMOG00000016655-7183.212Gadus_morhua
ENSXCOG00000017324-5484.746ENSGALG00000026081RBM385384.746Gallus_gallus
ENSXCOG00000017324-5688.618ENSGACG00000009873-7372.727Gasterosteus_aculeatus
ENSXCOG00000017324-6765.644ENSGACG00000015224rbm387765.644Gasterosteus_aculeatus
ENSXCOG00000017324-6076.087ENSGAGG00000001187RBM386276.087Gopherus_agassizii
ENSXCOG00000017324-6883.974ENSHBUG00000011778-7577.528Haplochromis_burtoni
ENSXCOG00000017324-6275.000ENSHBUG00000012058rbm385276.923Haplochromis_burtoni
ENSXCOG00000017324-6470.440ENSHGLG00000015077RBM386570.440Heterocephalus_glaber_female
ENSXCOG00000017324-6288.971ENSHCOG00000005622-5964.929Hippocampus_comes
ENSXCOG00000017324-6365.942ENSHCOG00000019040rbm385665.942Hippocampus_comes
ENSXCOG00000017324-7470.950ENSIPUG00000019349-7470.950Ictalurus_punctatus
ENSXCOG00000017324-6883.333ENSLBEG00000016163RBM387576.536Labrus_bergylta
ENSXCOG00000017324-6275.735ENSLBEG00000018878rbm385275.735Labrus_bergylta
ENSXCOG00000017324-8965.196ENSLOCG00000003456rbm388665.196Lepisosteus_oculatus
ENSXCOG00000017324-6078.947ENSMFAG00000043808RBM387895.745Macaca_fascicularis
ENSXCOG00000017324-6078.947ENSMMUG00000031391RBM387895.745Macaca_mulatta
ENSXCOG00000017324-6078.947ENSMNEG00000034683RBM387895.745Macaca_nemestrina
ENSXCOG00000017324-5172.566ENSMLEG00000043261-8772.566Mandrillus_leucophaeus
ENSXCOG00000017324-6275.000ENSMAMG00000024135rbm385275.000Mastacembelus_armatus
ENSXCOG00000017324-6588.811ENSMAMG00000020499RBM387175.978Mastacembelus_armatus
ENSXCOG00000017324-6275.000ENSMZEG00005026036rbm385275.000Maylandia_zebra
ENSXCOG00000017324-6883.974ENSMZEG00005000849-7577.528Maylandia_zebra
ENSXCOG00000017324-6078.195ENSMAUG00000021211Rbm385478.195Mesocricetus_auratus
ENSXCOG00000017324-5387.179ENSMICG00000038011RBM385287.179Microcebus_murinus
ENSXCOG00000017324-6077.444ENSMOCG00000008715Rbm385477.444Microtus_ochrogaster
ENSXCOG00000017324-9066.667ENSMMOG00000020051-8866.667Mola_mola
ENSXCOG00000017324-7076.301ENSMALG00000004680RBM386476.301Monopterus_albus
ENSXCOG00000017324-6271.324ENSMALG00000022327rbm385671.324Monopterus_albus
ENSXCOG00000017324-6077.444MGP_CAROLIEiJ_G0024745Rbm385993.478Mus_caroli
ENSXCOG00000017324-6077.444ENSMUSG00000027510Rbm385993.478Mus_musculus
ENSXCOG00000017324-6077.444MGP_PahariEiJ_G0026186Rbm385993.478Mus_pahari
ENSXCOG00000017324-6077.444MGP_SPRETEiJ_G0025665Rbm385993.478Mus_spretus
ENSXCOG00000017324-5386.325ENSMPUG00000006518RBM385586.325Mustela_putorius_furo
ENSXCOG00000017324-5384.615ENSMLUG00000011140RBM385284.615Myotis_lucifugus
ENSXCOG00000017324-6275.735ENSNBRG00000022685rbm385277.692Neolamprologus_brichardi
ENSXCOG00000017324-6883.974ENSNBRG00000022545-7177.528Neolamprologus_brichardi
ENSXCOG00000017324-5376.923ENSMEUG00000005475-8476.923Notamacropus_eugenii
ENSXCOG00000017324-7560.870ENSONIG00000017073rbm387360.870Oreochromis_niloticus
ENSXCOG00000017324-6883.974ENSONIG00000020324-7177.528Oreochromis_niloticus
ENSXCOG00000017324-6468.153ENSOANG00000009259RBM386663.953Ornithorhynchus_anatinus
ENSXCOG00000017324-6883.553ENSORLG00000027180-8664.912Oryzias_latipes
ENSXCOG00000017324-6883.553ENSORLG00020020751-8664.912Oryzias_latipes_hni
ENSXCOG00000017324-8858.031ENSORLG00020017871rbm387258.031Oryzias_latipes_hni
ENSXCOG00000017324-8858.031ENSORLG00015012606rbm387258.031Oryzias_latipes_hsok
ENSXCOG00000017324-6883.553ENSORLG00015017040-8664.912Oryzias_latipes_hsok
ENSXCOG00000017324-6884.211ENSOMEG00000023912-7176.966Oryzias_melastigma
ENSXCOG00000017324-5386.325ENSPPRG00000009507RBM387894.681Panthera_pardus
ENSXCOG00000017324-5387.179ENSPTRG00000045845-6287.179Pan_troglodytes
ENSXCOG00000017324-6078.947ENSPTRG00000013661RBM387895.745Pan_troglodytes
ENSXCOG00000017324-6561.379ENSPANG00000033127-6461.379Papio_anubis
ENSXCOG00000017324-6078.947ENSPANG00000020919-7895.745Papio_anubis
ENSXCOG00000017324-7970.492ENSPKIG00000025417rbm387670.492Paramormyrops_kingsleyae
ENSXCOG00000017324-7073.457ENSPKIG00000018122-9587.069Paramormyrops_kingsleyae
ENSXCOG00000017324-6877.707ENSPMGG00000017094-7172.067Periophthalmus_magnuspinnatus
ENSXCOG00000017324-6275.000ENSPFOG00000011658rbm388353.540Poecilia_formosa
ENSXCOG00000017324-6275.000ENSPLAG00000005218rbm388353.540Poecilia_latipinna
ENSXCOG00000017324-6887.898ENSPLAG00000002500-6187.898Poecilia_latipinna
ENSXCOG00000017324-6275.000ENSPMEG00000015770rbm388353.540Poecilia_mexicana
ENSXCOG00000017324-6275.000ENSPREG00000007398rbm388353.540Poecilia_reticulata
ENSXCOG00000017324-5386.325ENSPCOG00000026201RBM387795.745Propithecus_coquereli
ENSXCOG00000017324-6883.974ENSPNYG00000019727-10088.462Pundamilia_nyererei
ENSXCOG00000017324-6272.794ENSPNYG00000021373rbm385376.154Pundamilia_nyererei
ENSXCOG00000017324-6879.618ENSPNAG00000015123-9287.097Pygocentrus_nattereri
ENSXCOG00000017324-7471.676ENSPNAG00000010596rbm387271.676Pygocentrus_nattereri
ENSXCOG00000017324-6077.444ENSRNOG00000006420Rbm385477.444Rattus_norvegicus
ENSXCOG00000017324-6265.693ENSRROG00000036388-7165.672Rhinopithecus_roxellana
ENSXCOG00000017324-6079.699ENSSBOG00000031053RBM388895.745Saimiri_boliviensis_boliviensis
ENSXCOG00000017324-6282.353ENSSFOG00015004453rbm387369.101Scleropages_formosus
ENSXCOG00000017324-7377.654ENSSDUG00000021082RBM387177.654Seriola_dumerili
ENSXCOG00000017324-6275.735ENSSDUG00000022611rbm385275.735Seriola_dumerili
ENSXCOG00000017324-6275.735ENSSLDG00000010845rbm385279.200Seriola_lalandi_dorsalis
ENSXCOG00000017324-7377.654ENSSLDG00000011778RBM387177.654Seriola_lalandi_dorsalis
ENSXCOG00000017324-9954.709ENSSPAG00000011113rbm388354.709Stegastes_partitus
ENSXCOG00000017324-6882.803ENSSPAG00000020989RBM387876.536Stegastes_partitus
ENSXCOG00000017324-6884.076ENSTRUG00000019869-7177.654Takifugu_rubripes
ENSXCOG00000017324-6284.028ENSTNIG00000007093-7277.108Tetraodon_nigroviridis
ENSXCOG00000017324-6076.866ENSXETG00000011268rbm385876.866Xenopus_tropicalis
ENSXCOG00000017324-6275.000ENSXMAG00000023662rbm388354.260Xiphophorus_maculatus

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