EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017325 (Gene tree)
Gene ID: -
Gene Symbol: pcbp4
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: poly(rC) binding protein 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7517 bases
Position: chrKQ557213.1:26171119-26178635
Accession: ZDB-GENE-040426-2122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023185	KH_1	PF00013.29	7.7e-24	1	1
ENSXCOP00000023185	KH_2	PF07650.17	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023463	-	714	-	ENSXCOP00000023185	237 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017325	pcbp4	53	76.800	ENSXCOG00000005968	zgc:110045	66	76.800
ENSXCOG00000017325	pcbp4	64	70.861	ENSXCOG00000012907	pcbp2	69	70.861
ENSXCOG00000017325	pcbp4	73	71.795	ENSXCOG00000000111	-	70	87.379
ENSXCOG00000017325	pcbp4	59	33.673	ENSXCOG00000001806	hnrpkl	57	31.915
ENSXCOG00000017325	pcbp4	71	66.071	ENSXCOG00000013797	PCBP2	57	66.071
ENSXCOG00000017325	pcbp4	67	72.785	ENSXCOG00000020481	pcbp3	59	72.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017325	pcbp4	63	78.523	ENSG00000090097	PCBP4	86	75.000	Homo_sapiens
ENSXCOG00000017325	pcbp4	80	69.756	ENSAPOG00000009897	-	67	69.756	Acanthochromis_polyacanthus
ENSXCOG00000017325	pcbp4	63	98.667	ENSAPOG00000018462	-	66	98.667	Acanthochromis_polyacanthus
ENSXCOG00000017325	pcbp4	63	98.000	ENSACIG00000015264	pcbp4	51	98.000	Amphilophus_citrinellus
ENSXCOG00000017325	pcbp4	57	97.059	ENSAOCG00000006924	-	70	97.059	Amphiprion_ocellaris
ENSXCOG00000017325	pcbp4	63	87.333	ENSAOCG00000021366	-	59	87.333	Amphiprion_ocellaris
ENSXCOG00000017325	pcbp4	67	84.177	ENSAPEG00000009555	-	65	84.177	Amphiprion_percula
ENSXCOG00000017325	pcbp4	63	98.000	ENSAPEG00000023157	pcbp4	70	97.810	Amphiprion_percula
ENSXCOG00000017325	pcbp4	63	94.667	ENSATEG00000008529	pcbp4	56	84.181	Anabas_testudineus
ENSXCOG00000017325	pcbp4	63	87.333	ENSATEG00000006511	-	58	87.333	Anabas_testudineus
ENSXCOG00000017325	pcbp4	63	78.523	ENSCATG00000032034	PCBP4	50	58.824	Cercocebus_atys
ENSXCOG00000017325	pcbp4	63	83.333	ENSCSEG00000021041	PCBP4	52	83.333	Cynoglossus_semilaevis
ENSXCOG00000017325	pcbp4	64	98.675	ENSCVAG00000003674	pcbp4	70	93.333	Cyprinodon_variegatus
ENSXCOG00000017325	pcbp4	63	94.667	ENSDARG00000024276	pcbp4	75	93.860	Danio_rerio
ENSXCOG00000017325	pcbp4	63	67.251	ENSETEG00000001778	PCBP4	58	67.251	Echinops_telfairi
ENSXCOG00000017325	pcbp4	66	91.026	ENSELUG00000018204	pcbp4	71	91.026	Esox_lucius
ENSXCOG00000017325	pcbp4	79	72.917	ENSELUG00000001870	-	50	72.917	Esox_lucius
ENSXCOG00000017325	pcbp4	57	63.971	ENSFHEG00000002769	-	56	63.971	Fundulus_heteroclitus
ENSXCOG00000017325	pcbp4	100	93.671	ENSGAFG00000018301	pcbp4	99	93.671	Gambusia_affinis
ENSXCOG00000017325	pcbp4	63	87.333	ENSGACG00000002664	-	59	69.697	Gasterosteus_aculeatus
ENSXCOG00000017325	pcbp4	63	78.523	ENSGGOG00000012474	PCBP4	50	51.196	Gorilla_gorilla
ENSXCOG00000017325	pcbp4	63	98.000	ENSHBUG00000009472	pcbp4	50	97.987	Haplochromis_burtoni
ENSXCOG00000017325	pcbp4	67	89.937	ENSIPUG00000008212	pcbp4	65	89.937	Ictalurus_punctatus
ENSXCOG00000017325	pcbp4	63	98.667	ENSKMAG00000014252	pcbp4	64	97.368	Kryptolebias_marmoratus
ENSXCOG00000017325	pcbp4	65	87.662	ENSKMAG00000017554	-	51	87.662	Kryptolebias_marmoratus
ENSXCOG00000017325	pcbp4	63	83.893	ENSLACG00000015899	PCBP4	85	83.893	Latimeria_chalumnae
ENSXCOG00000017325	pcbp4	63	78.523	ENSMLEG00000027083	PCBP4	50	58.824	Mandrillus_leucophaeus
ENSXCOG00000017325	pcbp4	63	97.333	ENSMAMG00000010163	pcbp4	53	97.315	Mastacembelus_armatus
ENSXCOG00000017325	pcbp4	63	98.000	ENSMZEG00005008852	pcbp4	53	98.000	Maylandia_zebra
ENSXCOG00000017325	pcbp4	63	74.497	ENSMGAG00000005091	-	82	74.497	Meleagris_gallopavo
ENSXCOG00000017325	pcbp4	77	73.298	ENSMMOG00000020533	-	54	73.298	Mola_mola
ENSXCOG00000017325	pcbp4	63	96.000	ENSMALG00000020318	pcbp4	51	95.973	Monopterus_albus
ENSXCOG00000017325	pcbp4	63	78.523	MGP_CAROLIEiJ_G0032623	Pcbp4	86	76.056	Mus_caroli
ENSXCOG00000017325	pcbp4	63	78.523	ENSMUSG00000023495	Pcbp4	88	81.000	Mus_musculus
ENSXCOG00000017325	pcbp4	63	78.523	MGP_PahariEiJ_G0015491	Pcbp4	86	76.056	Mus_pahari
ENSXCOG00000017325	pcbp4	63	78.523	MGP_SPRETEiJ_G0033768	-	86	76.056	Mus_spretus
ENSXCOG00000017325	pcbp4	68	74.534	ENSNBRG00000007475	pcbp4	54	74.534	Neolamprologus_brichardi
ENSXCOG00000017325	pcbp4	64	94.702	ENSORLG00000003061	pcbp4	57	94.702	Oryzias_latipes
ENSXCOG00000017325	pcbp4	63	87.333	ENSORLG00000009899	-	52	87.333	Oryzias_latipes
ENSXCOG00000017325	pcbp4	63	87.333	ENSORLG00020001183	-	50	87.333	Oryzias_latipes_hni
ENSXCOG00000017325	pcbp4	64	94.702	ENSORLG00015019262	pcbp4	57	94.702	Oryzias_latipes_hsok
ENSXCOG00000017325	pcbp4	63	87.333	ENSORLG00015017819	-	50	87.333	Oryzias_latipes_hsok
ENSXCOG00000017325	pcbp4	64	88.079	ENSOMEG00000003516	-	60	88.000	Oryzias_melastigma
ENSXCOG00000017325	pcbp4	63	78.523	ENSPANG00000026222	PCBP4	50	58.824	Papio_anubis
ENSXCOG00000017325	pcbp4	63	90.667	ENSPKIG00000010244	pcbp4	50	90.667	Paramormyrops_kingsleyae
ENSXCOG00000017325	pcbp4	63	86.000	ENSPMGG00000022732	-	57	86.000	Periophthalmus_magnuspinnatus
ENSXCOG00000017325	pcbp4	59	88.571	ENSPFOG00000014474	pcbp4	68	99.123	Poecilia_formosa
ENSXCOG00000017325	pcbp4	64	67.539	ENSPLAG00000011438	-	77	67.539	Poecilia_latipinna
ENSXCOG00000017325	pcbp4	70	81.818	ENSPREG00000021498	-	56	81.818	Poecilia_reticulata
ENSXCOG00000017325	pcbp4	63	87.333	ENSPREG00000017370	-	60	87.333	Poecilia_reticulata
ENSXCOG00000017325	pcbp4	63	98.000	ENSPNYG00000019234	pcbp4	54	98.000	Pundamilia_nyererei
ENSXCOG00000017325	pcbp4	63	75.817	ENSSHAG00000007362	PCBP4	66	75.817	Sarcophilus_harrisii
ENSXCOG00000017325	pcbp4	72	89.474	ENSSMAG00000005827	pcbp4	65	89.474	Scophthalmus_maximus
ENSXCOG00000017325	pcbp4	63	98.667	ENSSDUG00000017719	pcbp4	56	98.667	Seriola_dumerili
ENSXCOG00000017325	pcbp4	63	88.000	ENSSDUG00000015540	-	59	88.000	Seriola_dumerili
ENSXCOG00000017325	pcbp4	63	88.000	ENSSLDG00000007851	-	59	88.000	Seriola_lalandi_dorsalis
ENSXCOG00000017325	pcbp4	63	98.667	ENSSLDG00000024847	-	66	98.667	Seriola_lalandi_dorsalis
ENSXCOG00000017325	pcbp4	63	87.333	ENSSPAG00000003033	-	55	87.333	Stegastes_partitus
ENSXCOG00000017325	pcbp4	63	87.333	ENSXMAG00000024530	-	55	87.333	Xiphophorus_maculatus
ENSXCOG00000017325	pcbp4	64	100.000	ENSXMAG00000015709	pcbp4	54	100.000	Xiphophorus_maculatus