EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017358 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83%2C member C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 10923 bases
Position: chrKQ557213.1:26451354-26462276
Accession: ZDB-GENE-120201-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023243	FAM83	PF07894.12	5.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023521	-	1362	-	ENSXCOP00000023243	453 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017358	fam83c	89	65.826	ENSACIG00000015685	fam83c	72	66.284	Amphilophus_citrinellus
ENSXCOG00000017358	fam83c	89	71.671	ENSAPEG00000023028	fam83c	70	71.671	Amphiprion_percula
ENSXCOG00000017358	fam83c	89	66.213	ENSATEG00000008410	fam83c	70	65.376	Anabas_testudineus
ENSXCOG00000017358	fam83c	89	68.605	ENSACLG00000013293	fam83c	72	67.599	Astatotilapia_calliptera
ENSXCOG00000017358	fam83c	89	56.532	ENSAMXG00000018399	fam83c	71	55.455	Astyanax_mexicanus
ENSXCOG00000017358	fam83c	89	64.574	ENSCSEG00000017826	fam83c	72	63.377	Cynoglossus_semilaevis
ENSXCOG00000017358	fam83c	89	74.299	ENSCVAG00000010589	fam83c	71	72.664	Cyprinodon_variegatus
ENSXCOG00000017358	fam83c	89	56.075	ENSDARG00000075296	fam83c	71	55.504	Danio_rerio
ENSXCOG00000017358	fam83c	89	57.500	ENSELUG00000014439	fam83c	70	57.306	Esox_lucius
ENSXCOG00000017358	fam83c	89	73.536	ENSFHEG00000017527	fam83c	72	71.897	Fundulus_heteroclitus
ENSXCOG00000017358	fam83c	95	34.247	ENSGAGG00000011761	FAM83C	66	35.351	Gopherus_agassizii
ENSXCOG00000017358	fam83c	89	68.372	ENSHBUG00000009655	fam83c	72	67.599	Haplochromis_burtoni
ENSXCOG00000017358	fam83c	89	46.800	ENSHCOG00000014079	fam83c	72	48.795	Hippocampus_comes
ENSXCOG00000017358	fam83c	89	56.674	ENSIPUG00000002046	FAM83C	71	56.674	Ictalurus_punctatus
ENSXCOG00000017358	fam83c	89	67.273	ENSKMAG00000015504	fam83c	72	66.818	Kryptolebias_marmoratus
ENSXCOG00000017358	fam83c	89	68.531	ENSLBEG00000017799	fam83c	71	68.065	Labrus_bergylta
ENSXCOG00000017358	fam83c	88	37.897	ENSLACG00000005534	FAM83C	51	61.935	Latimeria_chalumnae
ENSXCOG00000017358	fam83c	88	54.091	ENSLOCG00000007724	fam83c	70	53.759	Lepisosteus_oculatus
ENSXCOG00000017358	fam83c	89	68.721	ENSMAMG00000010316	fam83c	72	68.721	Mastacembelus_armatus
ENSXCOG00000017358	fam83c	89	68.605	ENSMZEG00005009063	fam83c	71	67.599	Maylandia_zebra
ENSXCOG00000017358	fam83c	90	63.496	ENSMMOG00000016277	fam83c	86	63.616	Mola_mola
ENSXCOG00000017358	fam83c	89	64.877	ENSMALG00000020114	fam83c	72	64.270	Monopterus_albus
ENSXCOG00000017358	fam83c	88	59.413	ENSONIG00000018564	fam83c	66	58.968	Oreochromis_niloticus
ENSXCOG00000017358	fam83c	89	61.609	ENSORLG00000002950	fam83c	71	60.230	Oryzias_latipes
ENSXCOG00000017358	fam83c	89	61.609	ENSORLG00020001822	fam83c	71	60.230	Oryzias_latipes_hni
ENSXCOG00000017358	fam83c	89	61.839	ENSORLG00015019398	fam83c	71	60.690	Oryzias_latipes_hsok
ENSXCOG00000017358	fam83c	89	62.100	ENSOMEG00000003633	fam83c	71	61.187	Oryzias_melastigma
ENSXCOG00000017358	fam83c	89	54.503	ENSPKIG00000023250	fam83c	70	53.103	Paramormyrops_kingsleyae
ENSXCOG00000017358	fam83c	89	69.734	ENSPMGG00000003433	fam83c	70	69.512	Periophthalmus_magnuspinnatus
ENSXCOG00000017358	fam83c	89	85.877	ENSPFOG00000014676	fam83c	72	85.160	Poecilia_formosa
ENSXCOG00000017358	fam83c	89	85.388	ENSPLAG00000023095	fam83c	72	84.932	Poecilia_latipinna
ENSXCOG00000017358	fam83c	89	85.877	ENSPMEG00000012791	fam83c	72	85.160	Poecilia_mexicana
ENSXCOG00000017358	fam83c	89	90.347	ENSPREG00000021668	fam83c	71	88.861	Poecilia_reticulata
ENSXCOG00000017358	fam83c	89	60.465	ENSPNYG00000019386	fam83c	70	59.907	Pundamilia_nyererei
ENSXCOG00000017358	fam83c	89	60.920	ENSPNAG00000011432	fam83c	71	60.460	Pygocentrus_nattereri
ENSXCOG00000017358	fam83c	89	57.783	ENSSFOG00015004158	fam83c	83	57.783	Scleropages_formosus
ENSXCOG00000017358	fam83c	89	66.968	ENSSMAG00000005706	fam83c	72	66.968	Scophthalmus_maximus
ENSXCOG00000017358	fam83c	89	66.988	ENSSDUG00000017583	fam83c	70	64.578	Seriola_dumerili
ENSXCOG00000017358	fam83c	89	65.427	ENSSLDG00000011527	fam83c	73	64.989	Seriola_lalandi_dorsalis
ENSXCOG00000017358	fam83c	89	68.172	ENSSPAG00000017752	fam83c	72	68.623	Stegastes_partitus
ENSXCOG00000017358	fam83c	89	88.330	ENSXMAG00000023922	fam83c	72	88.330	Xiphophorus_maculatus