EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017365 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 409 bases
Position: chrKQ557213.1:4832729-4833137
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023249	SM-ATX	PF14438.6	2.2e-09	1	1
ENSXCOP00000023249	LSM14	PF12701.7	2.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023527	-	300	-	ENSXCOP00000023249	99 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017365	-	82	64.198	ENSXCOG00000011423	-	89	64.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017365	-	90	64.045	ENSAPOG00000009997	-	82	64.045	Acanthochromis_polyacanthus
ENSXCOG00000017365	-	92	67.033	ENSACIG00000003134	-	74	67.033	Amphilophus_citrinellus
ENSXCOG00000017365	-	91	66.667	ENSAPEG00000013779	-	89	66.667	Amphiprion_percula
ENSXCOG00000017365	-	78	71.429	ENSATEG00000015882	-	88	71.429	Anabas_testudineus
ENSXCOG00000017365	-	92	68.132	ENSCVAG00000012411	-	94	68.132	Cyprinodon_variegatus
ENSXCOG00000017365	-	96	91.579	ENSCVAG00000005570	-	98	91.579	Cyprinodon_variegatus
ENSXCOG00000017365	-	92	67.033	ENSGAFG00000013718	-	94	67.033	Gambusia_affinis
ENSXCOG00000017365	-	99	90.816	ENSHBUG00000011864	-	73	90.816	Haplochromis_burtoni
ENSXCOG00000017365	-	92	67.033	ENSHBUG00000012323	-	87	67.033	Haplochromis_burtoni
ENSXCOG00000017365	-	100	84.848	ENSHCOG00000004862	-	91	84.848	Hippocampus_comes
ENSXCOG00000017365	-	92	67.033	ENSKMAG00000012850	-	94	67.033	Kryptolebias_marmoratus
ENSXCOG00000017365	-	86	64.706	ENSKMAG00000016674	-	81	64.444	Kryptolebias_marmoratus
ENSXCOG00000017365	-	93	94.565	ENSLBEG00000016427	lsm14b	64	94.565	Labrus_bergylta
ENSXCOG00000017365	-	92	69.231	ENSLBEG00000007971	-	88	69.231	Labrus_bergylta
ENSXCOG00000017365	-	99	76.531	ENSNGAG00000016305	-	78	76.531	Nannospalax_galili
ENSXCOG00000017365	-	99	90.816	ENSNBRG00000022606	-	73	90.816	Neolamprologus_brichardi
ENSXCOG00000017365	-	92	68.132	ENSNBRG00000022370	-	87	68.132	Neolamprologus_brichardi
ENSXCOG00000017365	-	92	66.304	ENSORLG00020018184	-	94	66.304	Oryzias_latipes_hni
ENSXCOG00000017365	-	80	64.557	ENSOMEG00000007241	-	95	64.557	Oryzias_melastigma
ENSXCOG00000017365	-	94	80.645	ENSPKIG00000003275	lsm14b	86	80.645	Paramormyrops_kingsleyae
ENSXCOG00000017365	-	77	57.895	ENSPMGG00000004595	-	77	57.895	Periophthalmus_magnuspinnatus
ENSXCOG00000017365	-	92	90.110	ENSPMGG00000014569	lsm14b	57	90.110	Periophthalmus_magnuspinnatus
ENSXCOG00000017365	-	79	67.949	ENSPREG00000007817	-	90	67.949	Poecilia_reticulata
ENSXCOG00000017365	-	95	95.745	ENSPREG00000016484	-	61	95.745	Poecilia_reticulata
ENSXCOG00000017365	-	99	90.816	ENSPNYG00000019601	-	73	90.816	Pundamilia_nyererei
ENSXCOG00000017365	-	92	67.033	ENSPNYG00000021706	-	86	67.033	Pundamilia_nyererei
ENSXCOG00000017365	-	89	89.773	ENSSLDG00000011706	-	96	89.773	Seriola_lalandi_dorsalis
ENSXCOG00000017365	-	81	71.250	ENSSLDG00000012686	-	87	71.250	Seriola_lalandi_dorsalis
ENSXCOG00000017365	-	81	71.250	ENSSLDG00000011341	-	87	71.250	Seriola_lalandi_dorsalis
ENSXCOG00000017365	-	90	66.292	ENSSPAG00000018837	-	88	66.292	Stegastes_partitus
ENSXCOG00000017365	-	82	64.198	ENSXMAG00000015481	-	89	64.198	Xiphophorus_maculatus