EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017380 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2228 bases
Position: chrKQ557208.1:19385238-19387465
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023275	MMR_HSR1	PF01926.23	8.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023553	-	540	-	ENSXCOP00000023275	179 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017380	arl5c	85	42.105	ENSXCOG00000002882	-	84	42.105
ENSXCOG00000017380	arl5c	97	46.857	ENSXCOG00000001487	-	98	47.093
ENSXCOG00000017380	arl5c	93	39.759	ENSXCOG00000005902	arl3	78	39.759
ENSXCOG00000017380	arl5c	98	47.159	ENSXCOG00000015162	-	98	47.159
ENSXCOG00000017380	arl5c	90	40.719	ENSXCOG00000003892	arl4d	83	40.719
ENSXCOG00000017380	arl5c	85	39.506	ENSXCOG00000009364	arfrp1	83	39.506
ENSXCOG00000017380	arl5c	89	73.750	ENSXCOG00000011539	arl8	73	73.750
ENSXCOG00000017380	arl5c	90	39.881	ENSXCOG00000003923	-	83	39.881
ENSXCOG00000017380	arl5c	63	31.579	ENSXCOG00000004543	arl8bb	77	31.579
ENSXCOG00000017380	arl5c	60	30.172	ENSXCOG00000003192	-	53	30.172
ENSXCOG00000017380	arl5c	98	46.893	ENSXCOG00000004139	arf2b	98	46.893
ENSXCOG00000017380	arl5c	100	46.111	ENSXCOG00000019704	arf3b	96	47.929
ENSXCOG00000017380	arl5c	90	42.012	ENSXCOG00000016119	arl4cb	84	42.012
ENSXCOG00000017380	arl5c	100	43.094	ENSXCOG00000006377	arl2	97	43.094
ENSXCOG00000017380	arl5c	98	44.633	ENSXCOG00000020384	-	98	44.633
ENSXCOG00000017380	arl5c	83	42.953	ENSXCOG00000011060	arl11	87	42.953
ENSXCOG00000017380	arl5c	51	33.696	ENSXCOG00000006154	-	62	33.696
ENSXCOG00000017380	arl5c	85	45.570	ENSXCOG00000007236	arl4aa	79	45.570
ENSXCOG00000017380	arl5c	93	36.747	ENSXCOG00000003337	arl3l2	89	36.747
ENSXCOG00000017380	arl5c	98	48.864	ENSXCOG00000016687	-	96	48.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017380	arl5c	100	88.827	ENSAPOG00000005821	arl5c	100	88.827	Acanthochromis_polyacanthus
ENSXCOG00000017380	arl5c	92	93.902	ENSACIG00000008975	arl5c	91	93.902	Amphilophus_citrinellus
ENSXCOG00000017380	arl5c	100	88.827	ENSAOCG00000010448	arl5c	100	88.827	Amphiprion_ocellaris
ENSXCOG00000017380	arl5c	100	88.827	ENSAPEG00000002699	arl5c	100	88.827	Amphiprion_percula
ENSXCOG00000017380	arl5c	99	88.136	ENSATEG00000000181	arl5c	99	88.136	Anabas_testudineus
ENSXCOG00000017380	arl5c	100	92.737	ENSACLG00000000922	arl5c	100	93.293	Astatotilapia_calliptera
ENSXCOG00000017380	arl5c	100	82.123	ENSAMXG00000031771	arl5c	100	82.123	Astyanax_mexicanus
ENSXCOG00000017380	arl5c	100	84.916	ENSCSEG00000009845	arl5c	100	84.916	Cynoglossus_semilaevis
ENSXCOG00000017380	arl5c	100	96.648	ENSCVAG00000012706	arl5c	100	96.648	Cyprinodon_variegatus
ENSXCOG00000017380	arl5c	99	82.022	ENSDARG00000035719	arl5c	99	82.022	Danio_rerio
ENSXCOG00000017380	arl5c	99	85.393	ENSELUG00000016864	arl5c	99	85.393	Esox_lucius
ENSXCOG00000017380	arl5c	99	97.175	ENSFHEG00000013677	arl5c	99	97.175	Fundulus_heteroclitus
ENSXCOG00000017380	arl5c	100	98.324	ENSGAFG00000002547	arl5c	100	98.324	Gambusia_affinis
ENSXCOG00000017380	arl5c	100	91.061	ENSGACG00000009321	arl5c	100	91.061	Gasterosteus_aculeatus
ENSXCOG00000017380	arl5c	99	93.258	ENSHBUG00000007301	arl5c	99	93.258	Haplochromis_burtoni
ENSXCOG00000017380	arl5c	99	84.270	ENSHCOG00000017576	-	99	84.270	Hippocampus_comes
ENSXCOG00000017380	arl5c	100	82.682	ENSIPUG00000023232	arl5c	100	82.682	Ictalurus_punctatus
ENSXCOG00000017380	arl5c	99	93.220	ENSKMAG00000011323	arl5c	99	93.220	Kryptolebias_marmoratus
ENSXCOG00000017380	arl5c	100	88.827	ENSLBEG00000006177	arl5c	86	88.827	Labrus_bergylta
ENSXCOG00000017380	arl5c	99	87.640	ENSMAMG00000022157	arl5c	99	87.640	Mastacembelus_armatus
ENSXCOG00000017380	arl5c	99	93.258	ENSMZEG00005022925	arl5c	99	93.258	Maylandia_zebra
ENSXCOG00000017380	arl5c	92	90.854	ENSMMOG00000020851	arl5c	96	90.854	Mola_mola
ENSXCOG00000017380	arl5c	92	90.854	ENSMALG00000009306	arl5c	93	90.854	Monopterus_albus
ENSXCOG00000017380	arl5c	99	93.820	ENSNBRG00000020245	arl5c	100	93.902	Neolamprologus_brichardi
ENSXCOG00000017380	arl5c	99	93.820	ENSONIG00000000890	arl5c	99	93.820	Oreochromis_niloticus
ENSXCOG00000017380	arl5c	99	86.441	ENSORLG00000002960	arl5c	100	86.585	Oryzias_latipes
ENSXCOG00000017380	arl5c	99	86.441	ENSORLG00020010074	arl5c	100	86.585	Oryzias_latipes_hni
ENSXCOG00000017380	arl5c	99	86.441	ENSORLG00015002752	arl5c	100	86.585	Oryzias_latipes_hsok
ENSXCOG00000017380	arl5c	96	87.135	ENSOMEG00000021718	arl5c	97	87.135	Oryzias_melastigma
ENSXCOG00000017380	arl5c	99	84.831	ENSPKIG00000021727	arl5c	99	84.831	Paramormyrops_kingsleyae
ENSXCOG00000017380	arl5c	100	97.207	ENSPFOG00000007842	arl5c	99	97.207	Poecilia_formosa
ENSXCOG00000017380	arl5c	100	96.648	ENSPLAG00000002394	arl5c	100	96.648	Poecilia_latipinna
ENSXCOG00000017380	arl5c	91	97.546	ENSPMEG00000000631	arl5c	94	97.546	Poecilia_mexicana
ENSXCOG00000017380	arl5c	100	97.765	ENSPREG00000008730	arl5c	100	97.765	Poecilia_reticulata
ENSXCOG00000017380	arl5c	99	93.258	ENSPNYG00000012720	arl5c	100	93.293	Pundamilia_nyererei
ENSXCOG00000017380	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSXCOG00000017380	arl5c	100	82.123	ENSSFOG00015023529	arl5c	100	82.123	Scleropages_formosus
ENSXCOG00000017380	arl5c	100	87.709	ENSSMAG00000010552	arl5c	100	87.709	Scophthalmus_maximus
ENSXCOG00000017380	arl5c	100	86.592	ENSSDUG00000022640	arl5c	100	86.592	Seriola_dumerili
ENSXCOG00000017380	arl5c	100	86.592	ENSSLDG00000000728	arl5c	100	86.592	Seriola_lalandi_dorsalis
ENSXCOG00000017380	arl5c	100	89.385	ENSSPAG00000007687	arl5c	100	89.385	Stegastes_partitus
ENSXCOG00000017380	arl5c	99	89.326	ENSTRUG00000022814	arl5c	99	89.326	Takifugu_rubripes
ENSXCOG00000017380	arl5c	99	88.764	ENSTNIG00000003015	arl5c	99	88.764	Tetraodon_nigroviridis
ENSXCOG00000017380	arl5c	100	99.441	ENSXMAG00000008447	arl5c	100	99.441	Xiphophorus_maculatus