EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017413 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 56
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9288 bases
Position: chrKQ557223.1:2762019-2771306
Accession: ZDB-GENE-040825-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023318	ResIII	PF04851.15	9.3e-09	1	1
ENSXCOP00000023318	DEAD	PF00270.29	7.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023597	-	1578	-	ENSXCOP00000023318	525 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017413	ddx56	58	30.293	ENSXCOG00000003747	eif4a1b	79	30.293
ENSXCOG00000017413	ddx56	77	32.512	ENSXCOG00000017180	ddx27	52	32.512
ENSXCOG00000017413	ddx56	79	31.894	ENSXCOG00000015880	ddx47	81	31.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017413	ddx56	97	64.165	ENSG00000136271	DDX56	98	68.508	Homo_sapiens
ENSXCOG00000017413	ddx56	96	85.098	ENSAPOG00000017113	ddx56	97	85.098	Acanthochromis_polyacanthus
ENSXCOG00000017413	ddx56	97	63.277	ENSAMEG00000017711	DDX56	97	63.277	Ailuropoda_melanoleuca
ENSXCOG00000017413	ddx56	92	73.939	ENSACIG00000013747	ddx56	99	89.011	Amphilophus_citrinellus
ENSXCOG00000017413	ddx56	95	84.496	ENSAOCG00000018059	ddx56	96	84.690	Amphiprion_ocellaris
ENSXCOG00000017413	ddx56	90	86.858	ENSAOCG00000015447	-	87	87.064	Amphiprion_ocellaris
ENSXCOG00000017413	ddx56	99	80.645	ENSAPEG00000007267	ddx56	100	80.645	Amphiprion_percula
ENSXCOG00000017413	ddx56	99	77.599	ENSATEG00000005279	ddx56	99	77.778	Anabas_testudineus
ENSXCOG00000017413	ddx56	99	77.857	ENSACLG00000020113	ddx56	100	77.857	Astatotilapia_calliptera
ENSXCOG00000017413	ddx56	98	73.496	ENSAMXG00000019357	ddx56	99	71.993	Astyanax_mexicanus
ENSXCOG00000017413	ddx56	97	64.218	ENSBTAG00000010602	DDX56	97	64.218	Bos_taurus
ENSXCOG00000017413	ddx56	97	38.129	WBGene00016073	C24H12.4	86	38.129	Caenorhabditis_elegans
ENSXCOG00000017413	ddx56	97	64.353	ENSCJAG00000012233	DDX56	99	63.670	Callithrix_jacchus
ENSXCOG00000017413	ddx56	79	61.609	ENSCAFG00000029295	DDX56	98	61.609	Canis_familiaris
ENSXCOG00000017413	ddx56	97	64.299	ENSCAFG00020019695	DDX56	97	64.299	Canis_lupus_dingo
ENSXCOG00000017413	ddx56	98	63.687	ENSCHIG00000014261	DDX56	98	63.687	Capra_hircus
ENSXCOG00000017413	ddx56	97	63.806	ENSTSYG00000008048	DDX56	97	64.098	Carlito_syrichta
ENSXCOG00000017413	ddx56	85	62.661	ENSCAPG00000006286	DDX56	99	62.661	Cavia_aperea
ENSXCOG00000017413	ddx56	98	64.564	ENSCPOG00000003359	DDX56	99	64.564	Cavia_porcellus
ENSXCOG00000017413	ddx56	99	63.119	ENSCCAG00000025303	DDX56	99	63.119	Cebus_capucinus
ENSXCOG00000017413	ddx56	97	64.286	ENSCATG00000039389	DDX56	97	64.286	Cercocebus_atys
ENSXCOG00000017413	ddx56	99	63.904	ENSCLAG00000007666	DDX56	99	63.904	Chinchilla_lanigera
ENSXCOG00000017413	ddx56	97	64.165	ENSCSAG00000015636	DDX56	97	64.165	Chlorocebus_sabaeus
ENSXCOG00000017413	ddx56	98	67.391	ENSCPBG00000024556	DDX56	99	67.391	Chrysemys_picta_bellii
ENSXCOG00000017413	ddx56	92	59.800	ENSCING00000005185	-	97	60.200	Ciona_intestinalis
ENSXCOG00000017413	ddx56	92	60.120	ENSCSAVG00000011266	-	99	60.321	Ciona_savignyi
ENSXCOG00000017413	ddx56	97	64.165	ENSCANG00000028187	DDX56	97	64.165	Colobus_angolensis_palliatus
ENSXCOG00000017413	ddx56	97	64.717	ENSCGRG00001019019	Ddx56	97	64.717	Cricetulus_griseus_chok1gshd
ENSXCOG00000017413	ddx56	97	64.717	ENSCGRG00000011870	Ddx56	97	64.717	Cricetulus_griseus_crigri
ENSXCOG00000017413	ddx56	99	77.540	ENSCSEG00000008368	ddx56	100	77.540	Cynoglossus_semilaevis
ENSXCOG00000017413	ddx56	99	84.946	ENSCVAG00000006499	ddx56	100	84.946	Cyprinodon_variegatus
ENSXCOG00000017413	ddx56	99	77.076	ENSDARG00000020913	ddx56	99	77.076	Danio_rerio
ENSXCOG00000017413	ddx56	83	63.100	ENSDNOG00000036526	DDX56	96	63.100	Dasypus_novemcinctus
ENSXCOG00000017413	ddx56	92	53.131	FBgn0001565	Hlc	88	53.131	Drosophila_melanogaster
ENSXCOG00000017413	ddx56	88	43.524	ENSETEG00000019559	-	100	43.524	Echinops_telfairi
ENSXCOG00000017413	ddx56	65	76.389	ENSETEG00000002969	-	64	76.389	Echinops_telfairi
ENSXCOG00000017413	ddx56	97	63.853	ENSEBUG00000009986	ddx56	98	64.037	Eptatretus_burgeri
ENSXCOG00000017413	ddx56	97	63.346	ENSEASG00005017795	DDX56	97	63.346	Equus_asinus_asinus
ENSXCOG00000017413	ddx56	97	63.158	ENSECAG00000019897	DDX56	97	63.158	Equus_caballus
ENSXCOG00000017413	ddx56	84	61.987	ENSEEUG00000004849	DDX56	98	61.987	Erinaceus_europaeus
ENSXCOG00000017413	ddx56	99	76.208	ENSELUG00000004150	ddx56	100	77.020	Esox_lucius
ENSXCOG00000017413	ddx56	97	63.208	ENSFCAG00000010261	DDX56	97	63.208	Felis_catus
ENSXCOG00000017413	ddx56	98	63.451	ENSFDAG00000007128	DDX56	98	63.451	Fukomys_damarensis
ENSXCOG00000017413	ddx56	100	86.852	ENSFHEG00000018008	ddx56	100	88.148	Fundulus_heteroclitus
ENSXCOG00000017413	ddx56	100	89.572	ENSGAFG00000006906	ddx56	100	89.572	Gambusia_affinis
ENSXCOG00000017413	ddx56	91	73.361	ENSGAGG00000006789	DDX56	87	73.361	Gopherus_agassizii
ENSXCOG00000017413	ddx56	97	64.165	ENSGGOG00000012031	DDX56	97	64.165	Gorilla_gorilla
ENSXCOG00000017413	ddx56	92	78.357	ENSHBUG00000015246	ddx56	90	78.758	Haplochromis_burtoni
ENSXCOG00000017413	ddx56	99	62.983	ENSHGLG00000017271	DDX56	99	62.983	Heterocephalus_glaber_female
ENSXCOG00000017413	ddx56	99	62.983	ENSHGLG00100015731	DDX56	99	62.983	Heterocephalus_glaber_male
ENSXCOG00000017413	ddx56	99	78.285	ENSHCOG00000001685	ddx56	99	78.285	Hippocampus_comes
ENSXCOG00000017413	ddx56	99	73.796	ENSIPUG00000006602	ddx56	97	73.796	Ictalurus_punctatus
ENSXCOG00000017413	ddx56	97	64.972	ENSSTOG00000000464	DDX56	97	64.972	Ictidomys_tridecemlineatus
ENSXCOG00000017413	ddx56	97	64.218	ENSJJAG00000014269	Ddx56	98	64.218	Jaculus_jaculus
ENSXCOG00000017413	ddx56	99	84.843	ENSKMAG00000016611	ddx56	99	84.843	Kryptolebias_marmoratus
ENSXCOG00000017413	ddx56	98	81.179	ENSLBEG00000026281	ddx56	99	81.749	Labrus_bergylta
ENSXCOG00000017413	ddx56	98	70.201	ENSLACG00000015551	DDX56	97	70.255	Latimeria_chalumnae
ENSXCOG00000017413	ddx56	98	74.595	ENSLOCG00000015185	ddx56	98	74.595	Lepisosteus_oculatus
ENSXCOG00000017413	ddx56	98	63.364	ENSLAFG00000018206	DDX56	98	63.364	Loxodonta_africana
ENSXCOG00000017413	ddx56	97	64.474	ENSMFAG00000041001	DDX56	97	64.474	Macaca_fascicularis
ENSXCOG00000017413	ddx56	97	64.474	ENSMMUG00000002645	DDX56	97	64.474	Macaca_mulatta
ENSXCOG00000017413	ddx56	97	64.474	ENSMNEG00000028492	DDX56	97	64.474	Macaca_nemestrina
ENSXCOG00000017413	ddx56	97	64.098	ENSMLEG00000043591	DDX56	97	64.098	Mandrillus_leucophaeus
ENSXCOG00000017413	ddx56	94	86.437	ENSMAMG00000007776	ddx56	99	77.957	Mastacembelus_armatus
ENSXCOG00000017413	ddx56	99	77.857	ENSMZEG00005009813	ddx56	100	77.857	Maylandia_zebra
ENSXCOG00000017413	ddx56	98	63.822	ENSMICG00000005550	DDX56	99	63.822	Microcebus_murinus
ENSXCOG00000017413	ddx56	97	62.712	ENSMOCG00000016782	Ddx56	97	62.900	Microtus_ochrogaster
ENSXCOG00000017413	ddx56	96	83.716	ENSMMOG00000009654	ddx56	98	84.100	Mola_mola
ENSXCOG00000017413	ddx56	97	59.218	ENSMODG00000016137	DDX56	97	59.218	Monodelphis_domestica
ENSXCOG00000017413	ddx56	70	81.030	ENSMALG00000016910	ddx56	100	81.030	Monopterus_albus
ENSXCOG00000017413	ddx56	98	62.268	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.339	Mus_caroli
ENSXCOG00000017413	ddx56	98	62.454	ENSMUSG00000004393	Ddx56	98	67.742	Mus_musculus
ENSXCOG00000017413	ddx56	97	63.277	MGP_PahariEiJ_G0016822	Ddx56	98	67.339	Mus_pahari
ENSXCOG00000017413	ddx56	98	62.454	MGP_SPRETEiJ_G0016911	Ddx56	98	67.742	Mus_spretus
ENSXCOG00000017413	ddx56	97	62.642	ENSMPUG00000018196	DDX56	86	62.642	Mustela_putorius_furo
ENSXCOG00000017413	ddx56	97	63.208	ENSMLUG00000003509	DDX56	97	63.208	Myotis_lucifugus
ENSXCOG00000017413	ddx56	98	65.056	ENSNGAG00000018785	Ddx56	99	65.056	Nannospalax_galili
ENSXCOG00000017413	ddx56	92	82.062	ENSNBRG00000002656	ddx56	90	82.062	Neolamprologus_brichardi
ENSXCOG00000017413	ddx56	98	64.684	ENSNLEG00000003816	DDX56	98	64.684	Nomascus_leucogenys
ENSXCOG00000017413	ddx56	92	61.460	ENSMEUG00000006788	DDX56	99	61.460	Notamacropus_eugenii
ENSXCOG00000017413	ddx56	98	62.852	ENSOPRG00000000292	-	98	62.852	Ochotona_princeps
ENSXCOG00000017413	ddx56	69	67.655	ENSODEG00000014807	DDX56	99	67.655	Octodon_degus
ENSXCOG00000017413	ddx56	99	80.000	ENSONIG00000011509	ddx56	99	80.185	Oreochromis_niloticus
ENSXCOG00000017413	ddx56	95	57.418	ENSOANG00000006320	-	99	57.611	Ornithorhynchus_anatinus
ENSXCOG00000017413	ddx56	50	67.557	ENSOANG00000010592	-	99	67.557	Ornithorhynchus_anatinus
ENSXCOG00000017413	ddx56	74	58.987	ENSOANG00000015987	-	94	58.987	Ornithorhynchus_anatinus
ENSXCOG00000017413	ddx56	98	63.941	ENSOCUG00000022918	DDX56	98	63.941	Oryctolagus_cuniculus
ENSXCOG00000017413	ddx56	99	80.466	ENSORLG00000001434	ddx56	100	80.466	Oryzias_latipes
ENSXCOG00000017413	ddx56	99	80.287	ENSORLG00020015718	ddx56	97	80.287	Oryzias_latipes_hni
ENSXCOG00000017413	ddx56	99	80.431	ENSORLG00015003004	ddx56	96	80.431	Oryzias_latipes_hsok
ENSXCOG00000017413	ddx56	99	80.287	ENSOMEG00000022072	ddx56	99	80.287	Oryzias_melastigma
ENSXCOG00000017413	ddx56	97	64.474	ENSOGAG00000009981	DDX56	97	64.474	Otolemur_garnettii
ENSXCOG00000017413	ddx56	97	64.218	ENSOARG00000015240	DDX56	97	64.218	Ovis_aries
ENSXCOG00000017413	ddx56	97	61.439	ENSPPAG00000029147	DDX56	97	61.439	Pan_paniscus
ENSXCOG00000017413	ddx56	99	52.941	ENSPPAG00000031263	-	99	52.941	Pan_paniscus
ENSXCOG00000017413	ddx56	97	63.158	ENSPPRG00000014594	DDX56	97	63.158	Panthera_pardus
ENSXCOG00000017413	ddx56	94	55.750	ENSPTIG00000019500	DDX56	97	55.750	Panthera_tigris_altaica
ENSXCOG00000017413	ddx56	94	52.519	ENSPTRG00000052765	-	99	53.876	Pan_troglodytes
ENSXCOG00000017413	ddx56	97	64.165	ENSPTRG00000019147	DDX56	97	64.165	Pan_troglodytes
ENSXCOG00000017413	ddx56	97	64.098	ENSPANG00000002446	DDX56	97	64.098	Papio_anubis
ENSXCOG00000017413	ddx56	99	74.327	ENSPKIG00000018998	ddx56	99	74.327	Paramormyrops_kingsleyae
ENSXCOG00000017413	ddx56	96	81.853	ENSPMGG00000017421	ddx56	97	81.853	Periophthalmus_magnuspinnatus
ENSXCOG00000017413	ddx56	98	65.306	ENSPCIG00000009336	DDX56	97	65.549	Phascolarctos_cinereus
ENSXCOG00000017413	ddx56	99	89.427	ENSPFOG00000018658	ddx56	100	90.143	Poecilia_formosa
ENSXCOG00000017413	ddx56	100	95.265	ENSPLAG00000019208	ddx56	100	95.265	Poecilia_latipinna
ENSXCOG00000017413	ddx56	99	94.030	ENSPMEG00000001775	ddx56	100	94.030	Poecilia_mexicana
ENSXCOG00000017413	ddx56	100	94.434	ENSPREG00000015142	ddx56	100	94.434	Poecilia_reticulata
ENSXCOG00000017413	ddx56	97	64.165	ENSPPYG00000017591	DDX56	97	64.165	Pongo_abelii
ENSXCOG00000017413	ddx56	96	63.327	ENSPCAG00000011499	DDX56	99	63.327	Procavia_capensis
ENSXCOG00000017413	ddx56	97	64.474	ENSPCOG00000024864	DDX56	97	64.474	Propithecus_coquereli
ENSXCOG00000017413	ddx56	85	69.194	ENSPVAG00000000791	DDX56	85	69.194	Pteropus_vampyrus
ENSXCOG00000017413	ddx56	99	77.679	ENSPNYG00000019212	ddx56	100	77.679	Pundamilia_nyererei
ENSXCOG00000017413	ddx56	98	79.017	ENSPNAG00000025446	ddx56	99	78.828	Pygocentrus_nattereri
ENSXCOG00000017413	ddx56	97	63.653	ENSRNOG00000004670	Ddx56	97	63.653	Rattus_norvegicus
ENSXCOG00000017413	ddx56	97	64.353	ENSRBIG00000030140	DDX56	97	64.353	Rhinopithecus_bieti
ENSXCOG00000017413	ddx56	97	64.165	ENSRROG00000044428	DDX56	97	64.165	Rhinopithecus_roxellana
ENSXCOG00000017413	ddx56	98	43.031	YLR276C	-	96	43.380	Saccharomyces_cerevisiae
ENSXCOG00000017413	ddx56	99	63.303	ENSSBOG00000034339	DDX56	99	63.303	Saimiri_boliviensis_boliviensis
ENSXCOG00000017413	ddx56	84	64.592	ENSSHAG00000016615	DDX56	98	64.592	Sarcophilus_harrisii
ENSXCOG00000017413	ddx56	99	73.477	ENSSFOG00015012795	ddx56	100	73.477	Scleropages_formosus
ENSXCOG00000017413	ddx56	99	78.660	ENSSMAG00000011280	ddx56	99	78.712	Scophthalmus_maximus
ENSXCOG00000017413	ddx56	99	78.826	ENSSDUG00000023597	ddx56	100	78.826	Seriola_dumerili
ENSXCOG00000017413	ddx56	99	78.648	ENSSLDG00000018369	ddx56	100	78.648	Seriola_lalandi_dorsalis
ENSXCOG00000017413	ddx56	74	77.586	ENSSARG00000014363	DDX56	77	72.464	Sorex_araneus
ENSXCOG00000017413	ddx56	99	69.134	ENSSPUG00000000784	DDX56	95	70.111	Sphenodon_punctatus
ENSXCOG00000017413	ddx56	92	87.400	ENSSPAG00000009392	ddx56	92	87.400	Stegastes_partitus
ENSXCOG00000017413	ddx56	98	63.080	ENSSSCG00000016745	DDX56	98	63.080	Sus_scrofa
ENSXCOG00000017413	ddx56	99	82.552	ENSTRUG00000018623	ddx56	99	82.552	Takifugu_rubripes
ENSXCOG00000017413	ddx56	99	77.465	ENSTNIG00000013593	ddx56	100	77.641	Tetraodon_nigroviridis
ENSXCOG00000017413	ddx56	99	63.519	ENSTBEG00000007119	DDX56	98	63.519	Tupaia_belangeri
ENSXCOG00000017413	ddx56	83	62.500	ENSTTRG00000010552	DDX56	97	62.500	Tursiops_truncatus
ENSXCOG00000017413	ddx56	97	63.465	ENSUAMG00000014194	DDX56	97	63.465	Ursus_americanus
ENSXCOG00000017413	ddx56	97	63.465	ENSUMAG00000009666	DDX56	97	63.465	Ursus_maritimus
ENSXCOG00000017413	ddx56	97	63.089	ENSVVUG00000011905	DDX56	97	63.277	Vulpes_vulpes
ENSXCOG00000017413	ddx56	99	69.873	ENSXETG00000019000	ddx56	99	70.054	Xenopus_tropicalis
ENSXCOG00000017413	ddx56	99	97.761	ENSXMAG00000018749	ddx56	100	97.761	Xiphophorus_maculatus