EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017552 (Gene tree)
Gene ID: -
Gene Symbol: fam83d
Alias: im:7149534|zgc:162965
Full Name: family with sequence similarity 83%2C member D
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7391 bases
Position: chrKQ557213.1:5794339-5801729
Accession: ZDB-GENE-041111-264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023500	FAM83	PF07894.12	3.5e-98	1	1
ENSXCOP00000023497	FAM83	PF07894.12	8.8e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023778	-	1230	-	ENSXCOP00000023497	409 (aa)	-	-
ENSXCOT00000023781	-	1623	-	ENSXCOP00000023500	540 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017552	fam83d	65	34.799	ENSXCOG00000013498	fam83e	58	34.799
ENSXCOG00000017552	fam83d	65	36.296	ENSXCOG00000015914	fam83fb	54	36.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017552	fam83d	73	56.066	ENSG00000101447	FAM83D	51	56.066	Homo_sapiens
ENSXCOG00000017552	fam83d	100	70.893	ENSAPOG00000010249	fam83d	100	70.893	Acanthochromis_polyacanthus
ENSXCOG00000017552	fam83d	72	38.889	ENSAMEG00000011957	FAM83D	86	38.667	Ailuropoda_melanoleuca
ENSXCOG00000017552	fam83d	100	69.424	ENSACIG00000011115	fam83d	100	69.424	Amphilophus_citrinellus
ENSXCOG00000017552	fam83d	100	72.321	ENSAOCG00000020591	fam83d	100	72.321	Amphiprion_ocellaris
ENSXCOG00000017552	fam83d	100	71.786	ENSAPEG00000023418	fam83d	100	71.786	Amphiprion_percula
ENSXCOG00000017552	fam83d	100	69.120	ENSATEG00000015038	fam83d	100	69.120	Anabas_testudineus
ENSXCOG00000017552	fam83d	62	38.482	ENSAPLG00000008669	-	91	39.005	Anas_platyrhynchos
ENSXCOG00000017552	fam83d	92	50.123	ENSACAG00000014274	FAM83D	93	43.580	Anolis_carolinensis
ENSXCOG00000017552	fam83d	73	55.082	ENSANAG00000034003	FAM83D	68	46.135	Aotus_nancymaae
ENSXCOG00000017552	fam83d	100	70.714	ENSACLG00000021027	fam83d	100	70.714	Astatotilapia_calliptera
ENSXCOG00000017552	fam83d	99	52.594	ENSAMXG00000036827	fam83d	99	53.309	Astyanax_mexicanus
ENSXCOG00000017552	fam83d	88	40.901	ENSBTAG00000000660	FAM83D	91	40.935	Bos_taurus
ENSXCOG00000017552	fam83d	73	55.806	ENSCJAG00000011490	FAM83D	65	46.247	Callithrix_jacchus
ENSXCOG00000017552	fam83d	61	34.860	ENSCAFG00000009027	FAM83D	93	35.115	Canis_familiaris
ENSXCOG00000017552	fam83d	88	39.405	ENSCAFG00020012788	FAM83D	91	39.963	Canis_lupus_dingo
ENSXCOG00000017552	fam83d	79	46.050	ENSCHIG00000023451	FAM83D	73	46.205	Capra_hircus
ENSXCOG00000017552	fam83d	66	57.609	ENSCPOG00000026951	FAM83D	68	47.549	Cavia_porcellus
ENSXCOG00000017552	fam83d	73	55.738	ENSCCAG00000029858	FAM83D	65	46.247	Cebus_capucinus
ENSXCOG00000017552	fam83d	66	57.762	ENSCLAG00000008915	FAM83D	68	47.794	Chinchilla_lanigera
ENSXCOG00000017552	fam83d	64	41.737	ENSCPBG00000018181	FAM83D	91	40.533	Chrysemys_picta_bellii
ENSXCOG00000017552	fam83d	67	55.516	ENSCGRG00001004084	Fam83d	68	46.078	Cricetulus_griseus_chok1gshd
ENSXCOG00000017552	fam83d	67	55.516	ENSCGRG00000015926	Fam83d	68	46.078	Cricetulus_griseus_crigri
ENSXCOG00000017552	fam83d	100	59.140	ENSCSEG00000009869	fam83d	100	59.140	Cynoglossus_semilaevis
ENSXCOG00000017552	fam83d	100	75.184	ENSCVAG00000001142	fam83d	100	75.184	Cyprinodon_variegatus
ENSXCOG00000017552	fam83d	99	53.761	ENSDARG00000077883	fam83d	100	67.327	Danio_rerio
ENSXCOG00000017552	fam83d	67	48.375	ENSDORG00000010647	Fam83d	90	35.701	Dipodomys_ordii
ENSXCOG00000017552	fam83d	77	39.009	ENSEBUG00000008020	-	65	36.685	Eptatretus_burgeri
ENSXCOG00000017552	fam83d	66	59.206	ENSEASG00005023471	FAM83D	86	41.264	Equus_asinus_asinus
ENSXCOG00000017552	fam83d	66	59.206	ENSECAG00000013238	FAM83D	65	48.020	Equus_caballus
ENSXCOG00000017552	fam83d	100	57.823	ENSELUG00000004726	fam83d	100	57.823	Esox_lucius
ENSXCOG00000017552	fam83d	73	42.466	ENSFALG00000005649	-	94	42.694	Ficedula_albicollis
ENSXCOG00000017552	fam83d	51	43.885	ENSFDAG00000000728	FAM83D	62	43.885	Fukomys_damarensis
ENSXCOG00000017552	fam83d	100	78.506	ENSFHEG00000002445	fam83d	100	78.506	Fundulus_heteroclitus
ENSXCOG00000017552	fam83d	62	71.984	ENSGMOG00000017927	fam83d	98	73.541	Gadus_morhua
ENSXCOG00000017552	fam83d	66	60.440	ENSGALG00000044404	-	68	49.874	Gallus_gallus
ENSXCOG00000017552	fam83d	100	92.778	ENSGAFG00000020121	fam83d	100	92.778	Gambusia_affinis
ENSXCOG00000017552	fam83d	62	79.468	ENSGACG00000010183	fam83d	98	80.608	Gasterosteus_aculeatus
ENSXCOG00000017552	fam83d	71	61.695	ENSGAGG00000015728	FAM83D	91	45.772	Gopherus_agassizii
ENSXCOG00000017552	fam83d	73	55.738	ENSGGOG00000015675	FAM83D	65	46.731	Gorilla_gorilla
ENSXCOG00000017552	fam83d	100	70.357	ENSHBUG00000013851	fam83d	100	70.357	Haplochromis_burtoni
ENSXCOG00000017552	fam83d	91	39.247	ENSHGLG00000006820	FAM83D	89	39.813	Heterocephalus_glaber_female
ENSXCOG00000017552	fam83d	91	39.247	ENSHGLG00100018635	FAM83D	89	39.813	Heterocephalus_glaber_male
ENSXCOG00000017552	fam83d	57	85.000	ENSHCOG00000003731	fam83d	70	84.444	Hippocampus_comes
ENSXCOG00000017552	fam83d	99	57.373	ENSIPUG00000014706	fam83d	99	53.235	Ictalurus_punctatus
ENSXCOG00000017552	fam83d	66	57.609	ENSSTOG00000001992	FAM83D	68	47.215	Ictidomys_tridecemlineatus
ENSXCOG00000017552	fam83d	87	40.672	ENSJJAG00000021283	Fam83d	90	40.858	Jaculus_jaculus
ENSXCOG00000017552	fam83d	99	68.592	ENSKMAG00000021120	fam83d	100	68.592	Kryptolebias_marmoratus
ENSXCOG00000017552	fam83d	100	67.380	ENSLBEG00000017964	fam83d	100	67.794	Labrus_bergylta
ENSXCOG00000017552	fam83d	72	61.000	ENSLACG00000015291	FAM83D	69	54.011	Latimeria_chalumnae
ENSXCOG00000017552	fam83d	89	60.925	ENSLOCG00000004621	fam83d	94	53.407	Lepisosteus_oculatus
ENSXCOG00000017552	fam83d	66	58.123	ENSLAFG00000026634	FAM83D	50	57.192	Loxodonta_africana
ENSXCOG00000017552	fam83d	73	56.393	ENSMFAG00000001827	FAM83D	62	47.087	Macaca_fascicularis
ENSXCOG00000017552	fam83d	100	69.643	ENSMAMG00000021041	fam83d	100	69.643	Mastacembelus_armatus
ENSXCOG00000017552	fam83d	100	70.463	ENSMZEG00005010134	fam83d	100	70.463	Maylandia_zebra
ENSXCOG00000017552	fam83d	66	57.971	ENSMICG00000037041	FAM83D	90	41.308	Microcebus_murinus
ENSXCOG00000017552	fam83d	74	53.226	ENSMOCG00000004363	Fam83d	54	52.025	Microtus_ochrogaster
ENSXCOG00000017552	fam83d	100	62.703	ENSMMOG00000019938	fam83d	100	62.703	Mola_mola
ENSXCOG00000017552	fam83d	72	56.187	ENSMODG00000000456	FAM83D	50	57.047	Monodelphis_domestica
ENSXCOG00000017552	fam83d	100	69.589	ENSMALG00000005956	fam83d	93	69.589	Monopterus_albus
ENSXCOG00000017552	fam83d	74	52.258	MGP_CAROLIEiJ_G0024594	Fam83d	68	45.700	Mus_caroli
ENSXCOG00000017552	fam83d	74	52.258	ENSMUSG00000027654	Fam83d	68	45.455	Mus_musculus
ENSXCOG00000017552	fam83d	67	55.516	MGP_PahariEiJ_G0026038	Fam83d	68	46.078	Mus_pahari
ENSXCOG00000017552	fam83d	74	52.258	MGP_SPRETEiJ_G0025516	Fam83d	68	45.455	Mus_spretus
ENSXCOG00000017552	fam83d	66	58.123	ENSMPUG00000017724	FAM83D	86	41.068	Mustela_putorius_furo
ENSXCOG00000017552	fam83d	88	41.399	ENSMLUG00000009206	FAM83D	91	41.509	Myotis_lucifugus
ENSXCOG00000017552	fam83d	87	38.418	ENSNGAG00000016269	Fam83d	90	39.439	Nannospalax_galili
ENSXCOG00000017552	fam83d	100	70.893	ENSNBRG00000023160	fam83d	100	70.893	Neolamprologus_brichardi
ENSXCOG00000017552	fam83d	66	49.455	ENSMEUG00000008016	-	69	48.621	Notamacropus_eugenii
ENSXCOG00000017552	fam83d	87	41.509	ENSOPRG00000013578	FAM83D	86	41.509	Ochotona_princeps
ENSXCOG00000017552	fam83d	66	57.971	ENSODEG00000014195	FAM83D	50	56.849	Octodon_degus
ENSXCOG00000017552	fam83d	97	69.647	ENSONIG00000020301	fam83d	97	69.231	Oreochromis_niloticus
ENSXCOG00000017552	fam83d	66	58.065	ENSOCUG00000011298	FAM83D	68	47.420	Oryctolagus_cuniculus
ENSXCOG00000017552	fam83d	100	67.089	ENSORLG00000013925	fam83d	100	67.089	Oryzias_latipes
ENSXCOG00000017552	fam83d	100	66.969	ENSORLG00020019609	fam83d	100	66.969	Oryzias_latipes_hni
ENSXCOG00000017552	fam83d	100	65.880	ENSORLG00015015297	fam83d	100	65.880	Oryzias_latipes_hsok
ENSXCOG00000017552	fam83d	100	67.151	ENSOMEG00000023737	fam83d	100	67.151	Oryzias_melastigma
ENSXCOG00000017552	fam83d	66	58.696	ENSOGAG00000000951	FAM83D	91	41.527	Otolemur_garnettii
ENSXCOG00000017552	fam83d	81	38.753	ENSOARG00000000644	FAM83D	77	38.627	Ovis_aries
ENSXCOG00000017552	fam83d	73	56.066	ENSPPAG00000035388	FAM83D	65	46.845	Pan_paniscus
ENSXCOG00000017552	fam83d	73	56.066	ENSPTRG00000013495	FAM83D	65	46.845	Pan_troglodytes
ENSXCOG00000017552	fam83d	100	53.791	ENSPKIG00000005759	fam83d	100	54.595	Paramormyrops_kingsleyae
ENSXCOG00000017552	fam83d	93	52.083	ENSPKIG00000005834	FAM83D	92	52.083	Paramormyrops_kingsleyae
ENSXCOG00000017552	fam83d	100	57.324	ENSPMGG00000023183	fam83d	100	57.324	Periophthalmus_magnuspinnatus
ENSXCOG00000017552	fam83d	67	56.228	ENSPEMG00000022585	Fam83d	54	52.665	Peromyscus_maniculatus_bairdii
ENSXCOG00000017552	fam83d	100	90.370	ENSPFOG00000015533	fam83d	100	90.370	Poecilia_formosa
ENSXCOG00000017552	fam83d	98	85.499	ENSPLAG00000019577	fam83d	97	85.499	Poecilia_latipinna
ENSXCOG00000017552	fam83d	100	90.556	ENSPMEG00000022169	fam83d	100	90.556	Poecilia_mexicana
ENSXCOG00000017552	fam83d	100	91.852	ENSPREG00000022272	fam83d	99	91.852	Poecilia_reticulata
ENSXCOG00000017552	fam83d	85	48.677	ENSPCOG00000014956	FAM83D	91	42.251	Propithecus_coquereli
ENSXCOG00000017552	fam83d	86	48.608	ENSPVAG00000012075	FAM83D	87	42.264	Pteropus_vampyrus
ENSXCOG00000017552	fam83d	100	70.144	ENSPNYG00000018750	fam83d	100	70.144	Pundamilia_nyererei
ENSXCOG00000017552	fam83d	99	51.313	ENSPNAG00000009546	fam83d	99	52.522	Pygocentrus_nattereri
ENSXCOG00000017552	fam83d	67	55.872	ENSRNOG00000015794	Fam83d	68	45.610	Rattus_norvegicus
ENSXCOG00000017552	fam83d	73	56.536	ENSRROG00000043158	FAM83D	51	56.536	Rhinopithecus_roxellana
ENSXCOG00000017552	fam83d	73	55.806	ENSSBOG00000026252	FAM83D	66	47.118	Saimiri_boliviensis_boliviensis
ENSXCOG00000017552	fam83d	80	50.423	ENSSHAG00000015541	FAM83D	63	50.423	Sarcophilus_harrisii
ENSXCOG00000017552	fam83d	86	58.630	ENSSFOG00015021806	FAM83D	77	68.750	Scleropages_formosus
ENSXCOG00000017552	fam83d	75	71.069	ENSSFOG00015020960	fam83d	65	68.882	Scleropages_formosus
ENSXCOG00000017552	fam83d	100	70.893	ENSSMAG00000013878	fam83d	100	70.893	Scophthalmus_maximus
ENSXCOG00000017552	fam83d	100	70.705	ENSSDUG00000019848	fam83d	100	70.991	Seriola_dumerili
ENSXCOG00000017552	fam83d	100	70.886	ENSSLDG00000011509	fam83d	100	70.886	Seriola_lalandi_dorsalis
ENSXCOG00000017552	fam83d	87	44.106	ENSSPUG00000009032	FAM83D	89	45.057	Sphenodon_punctatus
ENSXCOG00000017552	fam83d	100	72.242	ENSSPAG00000021210	fam83d	100	72.242	Stegastes_partitus
ENSXCOG00000017552	fam83d	67	57.092	ENSSSCG00000007351	FAM83D	68	45.499	Sus_scrofa
ENSXCOG00000017552	fam83d	50	63.810	ENSTGUG00000004606	-	76	48.315	Taeniopygia_guttata
ENSXCOG00000017552	fam83d	96	59.924	ENSTRUG00000023235	fam83d	98	59.924	Takifugu_rubripes
ENSXCOG00000017552	fam83d	65	73.162	ENSTNIG00000007315	fam83d	99	74.088	Tetraodon_nigroviridis
ENSXCOG00000017552	fam83d	68	56.690	ENSTBEG00000001740	FAM83D	65	47.912	Tupaia_belangeri
ENSXCOG00000017552	fam83d	88	41.154	ENSTTRG00000007693	FAM83D	87	42.610	Tursiops_truncatus
ENSXCOG00000017552	fam83d	88	40.892	ENSUAMG00000009725	FAM83D	91	40.816	Ursus_americanus
ENSXCOG00000017552	fam83d	61	36.387	ENSUMAG00000003348	FAM83D	93	36.132	Ursus_maritimus
ENSXCOG00000017552	fam83d	61	34.606	ENSVVUG00000029241	FAM83D	93	34.860	Vulpes_vulpes
ENSXCOG00000017552	fam83d	62	36.010	ENSXETG00000012144	fam83d	91	37.922	Xenopus_tropicalis
ENSXCOG00000017552	fam83d	100	97.037	ENSXMAG00000009595	fam83d	100	97.037	Xiphophorus_maculatus