EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017626 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5348 bases
Position: chrKQ557213.1:6647830-6653177
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023588	R3H	PF01424.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023871	-	1296	-	ENSXCOP00000023588	431 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017626	r3hcc1	88	33.493	ENSG00000104679	R3HCC1	93	33.333	Homo_sapiens
ENSXCOG00000017626	r3hcc1	85	57.256	ENSAPOG00000003616	r3hcc1	86	57.520	Acanthochromis_polyacanthus
ENSXCOG00000017626	r3hcc1	88	35.529	ENSAMEG00000002963	R3HCC1	85	35.577	Ailuropoda_melanoleuca
ENSXCOG00000017626	r3hcc1	90	50.926	ENSACIG00000017144	r3hcc1	96	50.926	Amphilophus_citrinellus
ENSXCOG00000017626	r3hcc1	86	55.181	ENSAOCG00000003945	r3hcc1	93	56.919	Amphiprion_ocellaris
ENSXCOG00000017626	r3hcc1	86	55.844	ENSAPEG00000003613	r3hcc1	93	57.180	Amphiprion_percula
ENSXCOG00000017626	r3hcc1	83	56.349	ENSATEG00000023860	r3hcc1	97	56.771	Anabas_testudineus
ENSXCOG00000017626	r3hcc1	89	34.312	ENSACAG00000016627	R3HCC1	58	46.099	Anolis_carolinensis
ENSXCOG00000017626	r3hcc1	89	33.568	ENSANAG00000036169	R3HCC1	88	34.360	Aotus_nancymaae
ENSXCOG00000017626	r3hcc1	89	34.824	ENSBTAG00000025830	R3HCC1	90	34.670	Bos_taurus
ENSXCOG00000017626	r3hcc1	88	35.115	ENSCJAG00000020118	R3HCC1	93	34.509	Callithrix_jacchus
ENSXCOG00000017626	r3hcc1	89	33.729	ENSCAFG00000009210	R3HCC1	89	33.491	Canis_familiaris
ENSXCOG00000017626	r3hcc1	75	32.213	ENSCAFG00020012870	R3HCC1	81	31.129	Canis_lupus_dingo
ENSXCOG00000017626	r3hcc1	89	34.135	ENSCHIG00000009107	R3HCC1	93	34.988	Capra_hircus
ENSXCOG00000017626	r3hcc1	88	34.928	ENSTSYG00000000511	R3HCC1	72	35.167	Carlito_syrichta
ENSXCOG00000017626	r3hcc1	88	31.522	ENSCPOG00000009696	R3HCC1	58	47.552	Cavia_porcellus
ENSXCOG00000017626	r3hcc1	88	34.097	ENSCCAG00000037811	R3HCC1	92	33.842	Cebus_capucinus
ENSXCOG00000017626	r3hcc1	88	35.248	ENSCATG00000032971	R3HCC1	82	34.375	Cercocebus_atys
ENSXCOG00000017626	r3hcc1	89	35.252	ENSCLAG00000015556	R3HCC1	79	34.689	Chinchilla_lanigera
ENSXCOG00000017626	r3hcc1	88	32.936	ENSCSAG00000016250	R3HCC1	85	34.615	Chlorocebus_sabaeus
ENSXCOG00000017626	r3hcc1	88	34.987	ENSCANG00000029441	R3HCC1	85	34.135	Colobus_angolensis_palliatus
ENSXCOG00000017626	r3hcc1	72	44.937	ENSCGRG00001014977	R3hcc1	62	42.537	Cricetulus_griseus_chok1gshd
ENSXCOG00000017626	r3hcc1	72	44.937	ENSCGRG00000004454	R3hcc1	62	42.537	Cricetulus_griseus_crigri
ENSXCOG00000017626	r3hcc1	90	52.427	ENSCSEG00000005748	r3hcc1	97	52.068	Cynoglossus_semilaevis
ENSXCOG00000017626	r3hcc1	71	63.750	ENSCVAG00000002640	r3hcc1	87	63.125	Cyprinodon_variegatus
ENSXCOG00000017626	r3hcc1	89	39.651	ENSDARG00000099593	r3hcc1	94	38.903	Danio_rerio
ENSXCOG00000017626	r3hcc1	88	32.464	ENSDNOG00000007168	R3HCC1	57	44.444	Dasypus_novemcinctus
ENSXCOG00000017626	r3hcc1	89	31.360	ENSDORG00000026365	R3hcc1	58	43.919	Dipodomys_ordii
ENSXCOG00000017626	r3hcc1	89	31.043	ENSETEG00000001147	R3HCC1	91	30.404	Echinops_telfairi
ENSXCOG00000017626	r3hcc1	89	35.897	ENSEASG00005018782	R3HCC1	75	35.529	Equus_asinus_asinus
ENSXCOG00000017626	r3hcc1	89	36.000	ENSECAG00000025013	R3HCC1	92	35.765	Equus_caballus
ENSXCOG00000017626	r3hcc1	88	33.413	ENSEEUG00000011918	R3HCC1	90	34.368	Erinaceus_europaeus
ENSXCOG00000017626	r3hcc1	84	44.836	ENSELUG00000023650	r3hcc1	95	41.687	Esox_lucius
ENSXCOG00000017626	r3hcc1	88	35.252	ENSFCAG00000012395	R3HCC1	90	35.749	Felis_catus
ENSXCOG00000017626	r3hcc1	69	39.333	ENSFALG00000001646	R3HCC1	63	34.682	Ficedula_albicollis
ENSXCOG00000017626	r3hcc1	86	34.726	ENSGMOG00000017590	-	96	35.106	Gadus_morhua
ENSXCOG00000017626	r3hcc1	89	86.835	ENSGAFG00000008747	-	97	86.835	Gambusia_affinis
ENSXCOG00000017626	r3hcc1	84	55.291	ENSGACG00000008447	r3hcc1	87	55.026	Gasterosteus_aculeatus
ENSXCOG00000017626	r3hcc1	71	44.118	ENSGAGG00000018009	R3HCC1	50	41.624	Gopherus_agassizii
ENSXCOG00000017626	r3hcc1	88	34.204	ENSGGOG00000013817	R3HCC1	93	32.850	Gorilla_gorilla
ENSXCOG00000017626	r3hcc1	66	65.079	ENSHBUG00000022250	-	82	65.079	Haplochromis_burtoni
ENSXCOG00000017626	r3hcc1	88	35.122	ENSHGLG00000010517	R3HCC1	86	34.058	Heterocephalus_glaber_female
ENSXCOG00000017626	r3hcc1	88	35.122	ENSHGLG00100006388	R3HCC1	86	34.058	Heterocephalus_glaber_male
ENSXCOG00000017626	r3hcc1	84	49.206	ENSHCOG00000011745	r3hcc1	84	50.000	Hippocampus_comes
ENSXCOG00000017626	r3hcc1	89	41.582	ENSIPUG00000024504	r3hcc1	83	40.909	Ictalurus_punctatus
ENSXCOG00000017626	r3hcc1	62	44.805	ENSSTOG00000027130	R3HCC1	59	46.259	Ictidomys_tridecemlineatus
ENSXCOG00000017626	r3hcc1	86	63.239	ENSKMAG00000000286	r3hcc1	97	61.954	Kryptolebias_marmoratus
ENSXCOG00000017626	r3hcc1	71	47.020	ENSLACG00000011894	R3HCC1	65	47.619	Latimeria_chalumnae
ENSXCOG00000017626	r3hcc1	89	41.162	ENSLOCG00000015442	r3hcc1	97	40.500	Lepisosteus_oculatus
ENSXCOG00000017626	r3hcc1	60	45.578	ENSLAFG00000016137	R3HCC1	55	45.578	Loxodonta_africana
ENSXCOG00000017626	r3hcc1	88	35.509	ENSMFAG00000032894	R3HCC1	83	34.615	Macaca_fascicularis
ENSXCOG00000017626	r3hcc1	88	34.097	ENSMMUG00000016655	R3HCC1	84	34.615	Macaca_mulatta
ENSXCOG00000017626	r3hcc1	88	35.509	ENSMNEG00000043283	R3HCC1	92	35.233	Macaca_nemestrina
ENSXCOG00000017626	r3hcc1	88	36.031	ENSMLEG00000030147	R3HCC1	85	34.615	Mandrillus_leucophaeus
ENSXCOG00000017626	r3hcc1	86	55.612	ENSMAMG00000018146	r3hcc1	97	55.612	Mastacembelus_armatus
ENSXCOG00000017626	r3hcc1	88	33.415	ENSMGAG00000001356	R3HCC1	85	33.415	Meleagris_gallopavo
ENSXCOG00000017626	r3hcc1	88	32.522	ENSMAUG00000016096	R3hcc1	93	33.108	Mesocricetus_auratus
ENSXCOG00000017626	r3hcc1	88	35.411	ENSMICG00000011146	R3HCC1	92	35.162	Microcebus_murinus
ENSXCOG00000017626	r3hcc1	61	44.898	ENSMOCG00000018508	R3hcc1	93	33.188	Microtus_ochrogaster
ENSXCOG00000017626	r3hcc1	86	54.271	ENSMALG00000000731	r3hcc1	97	56.266	Monopterus_albus
ENSXCOG00000017626	r3hcc1	61	42.177	MGP_CAROLIEiJ_G0019467	R3hcc1	60	40.602	Mus_caroli
ENSXCOG00000017626	r3hcc1	61	42.000	ENSMUSG00000034194	R3hcc1	56	43.056	Mus_musculus
ENSXCOG00000017626	r3hcc1	62	41.667	MGP_PahariEiJ_G0030484	R3hcc1	55	42.361	Mus_pahari
ENSXCOG00000017626	r3hcc1	61	42.000	MGP_SPRETEiJ_G0020359	R3hcc1	56	43.056	Mus_spretus
ENSXCOG00000017626	r3hcc1	89	34.752	ENSMPUG00000003457	R3HCC1	81	34.458	Mustela_putorius_furo
ENSXCOG00000017626	r3hcc1	88	33.019	ENSMLUG00000000266	R3HCC1	86	33.962	Myotis_lucifugus
ENSXCOG00000017626	r3hcc1	78	51.786	ENSNBRG00000016975	-	84	51.786	Neolamprologus_brichardi
ENSXCOG00000017626	r3hcc1	87	33.333	ENSNLEG00000015944	R3HCC1	87	33.090	Nomascus_leucogenys
ENSXCOG00000017626	r3hcc1	89	34.038	ENSMEUG00000010587	R3HCC1	93	34.272	Notamacropus_eugenii
ENSXCOG00000017626	r3hcc1	89	36.562	ENSOPRG00000013390	R3HCC1	89	36.320	Ochotona_princeps
ENSXCOG00000017626	r3hcc1	89	32.071	ENSODEG00000007529	R3HCC1	59	43.919	Octodon_degus
ENSXCOG00000017626	r3hcc1	88	32.775	ENSOANG00000013877	R3HCC1	90	33.176	Ornithorhynchus_anatinus
ENSXCOG00000017626	r3hcc1	89	35.422	ENSOCUG00000023554	R3HCC1	80	35.577	Oryctolagus_cuniculus
ENSXCOG00000017626	r3hcc1	86	51.047	ENSORLG00000016816	r3hcc1	97	50.000	Oryzias_latipes
ENSXCOG00000017626	r3hcc1	86	50.262	ENSORLG00020012005	r3hcc1	97	49.215	Oryzias_latipes_hni
ENSXCOG00000017626	r3hcc1	86	51.042	ENSORLG00015007018	r3hcc1	97	50.260	Oryzias_latipes_hsok
ENSXCOG00000017626	r3hcc1	86	50.521	ENSOMEG00000000816	r3hcc1	97	50.262	Oryzias_melastigma
ENSXCOG00000017626	r3hcc1	88	33.902	ENSOGAG00000001291	R3HCC1	57	44.444	Otolemur_garnettii
ENSXCOG00000017626	r3hcc1	89	33.967	ENSOARG00000010146	R3HCC1	91	34.679	Ovis_aries
ENSXCOG00000017626	r3hcc1	88	32.688	ENSPPAG00000033165	R3HCC1	93	33.333	Pan_paniscus
ENSXCOG00000017626	r3hcc1	88	35.252	ENSPPRG00000002522	R3HCC1	93	35.749	Panthera_pardus
ENSXCOG00000017626	r3hcc1	83	35.354	ENSPTIG00000011230	R3HCC1	92	35.878	Panthera_tigris_altaica
ENSXCOG00000017626	r3hcc1	88	33.250	ENSPTRG00000020076	R3HCC1	85	33.333	Pan_troglodytes
ENSXCOG00000017626	r3hcc1	88	35.509	ENSPANG00000000453	R3HCC1	92	34.715	Papio_anubis
ENSXCOG00000017626	r3hcc1	84	42.010	ENSPKIG00000020397	-	95	41.237	Paramormyrops_kingsleyae
ENSXCOG00000017626	r3hcc1	89	33.713	ENSPSIG00000017664	R3HCC1	95	33.724	Pelodiscus_sinensis
ENSXCOG00000017626	r3hcc1	61	58.108	ENSPMGG00000007792	r3hcc1	60	58.108	Periophthalmus_magnuspinnatus
ENSXCOG00000017626	r3hcc1	88	32.743	ENSPEMG00000007118	R3hcc1	93	33.186	Peromyscus_maniculatus_bairdii
ENSXCOG00000017626	r3hcc1	84	31.961	ENSPCIG00000022718	-	54	42.667	Phascolarctos_cinereus
ENSXCOG00000017626	r3hcc1	86	87.071	ENSPFOG00000022301	r3hcc1	84	87.071	Poecilia_formosa
ENSXCOG00000017626	r3hcc1	86	87.863	ENSPLAG00000010794	r3hcc1	84	87.863	Poecilia_latipinna
ENSXCOG00000017626	r3hcc1	86	87.071	ENSPMEG00000022515	r3hcc1	84	87.071	Poecilia_mexicana
ENSXCOG00000017626	r3hcc1	86	86.016	ENSPREG00000000713	r3hcc1	84	86.016	Poecilia_reticulata
ENSXCOG00000017626	r3hcc1	83	32.581	ENSPPYG00000018436	R3HCC1	96	34.091	Pongo_abelii
ENSXCOG00000017626	r3hcc1	63	45.833	ENSPCAG00000012229	R3HCC1	64	45.833	Procavia_capensis
ENSXCOG00000017626	r3hcc1	88	34.414	ENSPCOG00000027554	R3HCC1	93	33.735	Propithecus_coquereli
ENSXCOG00000017626	r3hcc1	89	33.806	ENSPVAG00000009829	R3HCC1	90	33.570	Pteropus_vampyrus
ENSXCOG00000017626	r3hcc1	86	42.781	ENSPNAG00000023875	r3hcc1	96	42.781	Pygocentrus_nattereri
ENSXCOG00000017626	r3hcc1	63	41.875	ENSRNOG00000016777	AABR07018321.1	55	39.850	Rattus_norvegicus
ENSXCOG00000017626	r3hcc1	88	35.248	ENSRBIG00000028045	R3HCC1	93	34.293	Rhinopithecus_bieti
ENSXCOG00000017626	r3hcc1	88	35.248	ENSRROG00000031126	R3HCC1	92	34.715	Rhinopithecus_roxellana
ENSXCOG00000017626	r3hcc1	89	33.582	ENSSBOG00000022590	R3HCC1	93	34.300	Saimiri_boliviensis_boliviensis
ENSXCOG00000017626	r3hcc1	50	48.750	ENSSHAG00000016526	-	51	48.750	Sarcophilus_harrisii
ENSXCOG00000017626	r3hcc1	86	44.444	ENSSFOG00015013507	r3hcc1	98	43.117	Scleropages_formosus
ENSXCOG00000017626	r3hcc1	85	59.079	ENSSMAG00000008647	r3hcc1	96	58.462	Scophthalmus_maximus
ENSXCOG00000017626	r3hcc1	90	59.611	ENSSDUG00000022786	r3hcc1	96	59.611	Seriola_dumerili
ENSXCOG00000017626	r3hcc1	90	59.367	ENSSLDG00000019031	r3hcc1	96	59.367	Seriola_lalandi_dorsalis
ENSXCOG00000017626	r3hcc1	86	58.098	ENSSPAG00000013497	r3hcc1	93	56.658	Stegastes_partitus
ENSXCOG00000017626	r3hcc1	89	31.667	ENSSSCG00000037347	-	84	31.894	Sus_scrofa
ENSXCOG00000017626	r3hcc1	89	34.752	ENSSSCG00000039915	-	89	34.739	Sus_scrofa
ENSXCOG00000017626	r3hcc1	86	50.000	ENSTRUG00000015880	r3hcc1	92	48.800	Takifugu_rubripes
ENSXCOG00000017626	r3hcc1	89	33.253	ENSTTRG00000012247	R3HCC1	90	33.254	Tursiops_truncatus
ENSXCOG00000017626	r3hcc1	88	33.491	ENSUAMG00000007344	R3HCC1	93	34.375	Ursus_americanus
ENSXCOG00000017626	r3hcc1	89	33.879	ENSVVUG00000005056	R3HCC1	59	45.833	Vulpes_vulpes
ENSXCOG00000017626	r3hcc1	91	92.327	ENSXMAG00000018375	r3hcc1	99	92.327	Xiphophorus_maculatus