EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017706 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 41692 bases
Position: chrKQ557219.1:790520-832211
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023703	RRM_1	PF00076.22	4.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000023987	-	1020	-	ENSXCOP00000023703	339 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017706	-	94	42.700	ENSXCOG00000011871	-	85	42.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017706	-	87	60.117	ENSG00000149187	CELF1	88	59.763	Homo_sapiens
ENSXCOG00000017706	-	87	67.733	ENSAPOG00000024000	celf1	87	69.965	Acanthochromis_polyacanthus
ENSXCOG00000017706	-	87	59.824	ENSAMEG00000007596	CELF1	83	59.587	Ailuropoda_melanoleuca
ENSXCOG00000017706	-	87	61.765	ENSACIG00000023843	celf1	88	61.721	Amphilophus_citrinellus
ENSXCOG00000017706	-	87	67.246	ENSAOCG00000001252	celf1	88	67.544	Amphiprion_ocellaris
ENSXCOG00000017706	-	87	67.733	ENSAPEG00000002340	celf1	92	67.836	Amphiprion_percula
ENSXCOG00000017706	-	87	60.767	ENSATEG00000010871	celf1	88	60.947	Anabas_testudineus
ENSXCOG00000017706	-	87	58.407	ENSACAG00000002114	CELF1	84	57.864	Anolis_carolinensis
ENSXCOG00000017706	-	87	60.117	ENSANAG00000031770	CELF1	83	59.882	Aotus_nancymaae
ENSXCOG00000017706	-	87	71.203	ENSACLG00000010181	-	82	71.746	Astatotilapia_calliptera
ENSXCOG00000017706	-	87	60.845	ENSAMXG00000020576	celf1	88	58.859	Astyanax_mexicanus
ENSXCOG00000017706	-	87	59.531	ENSBTAG00000002520	CELF1	87	59.292	Bos_taurus
ENSXCOG00000017706	-	87	62.813	ENSCJAG00000020133	CELF1	83	60.000	Callithrix_jacchus
ENSXCOG00000017706	-	87	60.117	ENSCAFG00000008452	CELF1	83	59.882	Canis_familiaris
ENSXCOG00000017706	-	87	60.117	ENSCAFG00020025487	CELF1	88	56.395	Canis_lupus_dingo
ENSXCOG00000017706	-	87	60.411	ENSCHIG00000024582	CELF1	83	60.177	Capra_hircus
ENSXCOG00000017706	-	87	60.117	ENSTSYG00000003866	CELF1	87	59.882	Carlito_syrichta
ENSXCOG00000017706	-	87	59.942	ENSCPOG00000036381	CELF1	87	60.000	Cavia_porcellus
ENSXCOG00000017706	-	87	60.117	ENSCCAG00000033487	CELF1	87	59.882	Cebus_capucinus
ENSXCOG00000017706	-	87	60.117	ENSCATG00000040143	CELF1	87	60.000	Cercocebus_atys
ENSXCOG00000017706	-	87	60.117	ENSCLAG00000011791	CELF1	83	59.882	Chinchilla_lanigera
ENSXCOG00000017706	-	87	59.824	ENSCSAG00000005786	CELF1	83	59.587	Chlorocebus_sabaeus
ENSXCOG00000017706	-	87	58.017	ENSCPBG00000022914	CELF1	88	58.187	Chrysemys_picta_bellii
ENSXCOG00000017706	-	86	60.177	ENSCANG00000032689	CELF1	87	58.284	Colobus_angolensis_palliatus
ENSXCOG00000017706	-	87	59.824	ENSCGRG00001011274	Celf1	83	59.587	Cricetulus_griseus_chok1gshd
ENSXCOG00000017706	-	87	59.824	ENSCGRG00000015357	Celf1	83	59.587	Cricetulus_griseus_crigri
ENSXCOG00000017706	-	87	58.044	ENSCSEG00000008675	celf1	86	61.076	Cynoglossus_semilaevis
ENSXCOG00000017706	-	87	63.764	ENSDARG00000005315	celf1	93	94.030	Danio_rerio
ENSXCOG00000017706	-	87	60.117	ENSDNOG00000009523	CELF1	87	60.000	Dasypus_novemcinctus
ENSXCOG00000017706	-	87	48.235	ENSDORG00000013721	Celf1	82	48.071	Dipodomys_ordii
ENSXCOG00000017706	-	65	51.119	ENSETEG00000004507	CELF1	63	53.184	Echinops_telfairi
ENSXCOG00000017706	-	87	59.824	ENSEASG00005010831	CELF1	70	59.706	Equus_asinus_asinus
ENSXCOG00000017706	-	87	60.117	ENSECAG00000007741	CELF1	87	58.160	Equus_caballus
ENSXCOG00000017706	-	87	64.225	ENSELUG00000023173	celf1	89	62.040	Esox_lucius
ENSXCOG00000017706	-	87	60.117	ENSFCAG00000002535	CELF1	87	59.882	Felis_catus
ENSXCOG00000017706	-	87	59.238	ENSFALG00000006402	CELF1	83	58.824	Ficedula_albicollis
ENSXCOG00000017706	-	91	59.824	ENSFDAG00000008517	CELF1	88	59.587	Fukomys_damarensis
ENSXCOG00000017706	-	87	63.953	ENSGMOG00000012783	celf1	86	64.516	Gadus_morhua
ENSXCOG00000017706	-	87	59.412	ENSGALG00000008097	CELF1	87	59.172	Gallus_gallus
ENSXCOG00000017706	-	96	63.380	ENSGACG00000014226	celf1	90	63.173	Gasterosteus_aculeatus
ENSXCOG00000017706	-	87	59.767	ENSGAGG00000011562	CELF1	87	57.567	Gopherus_agassizii
ENSXCOG00000017706	-	87	59.942	ENSGGOG00000004106	CELF1	83	60.000	Gorilla_gorilla
ENSXCOG00000017706	-	87	67.751	ENSHBUG00000017881	celf1	84	67.857	Haplochromis_burtoni
ENSXCOG00000017706	-	94	53.351	ENSHGLG00000019214	-	87	52.688	Heterocephalus_glaber_female
ENSXCOG00000017706	-	87	59.942	ENSHGLG00000006909	-	87	60.000	Heterocephalus_glaber_female
ENSXCOG00000017706	-	87	59.942	ENSHGLG00100013863	-	87	60.000	Heterocephalus_glaber_male
ENSXCOG00000017706	-	94	51.031	ENSHGLG00100017423	-	87	50.646	Heterocephalus_glaber_male
ENSXCOG00000017706	-	87	65.976	ENSHCOG00000000258	celf1	88	65.179	Hippocampus_comes
ENSXCOG00000017706	-	79	67.314	ENSIPUG00000023708	celf1	79	66.234	Ictalurus_punctatus
ENSXCOG00000017706	-	87	60.117	ENSSTOG00000000613	CELF1	87	60.000	Ictidomys_tridecemlineatus
ENSXCOG00000017706	-	87	60.117	ENSJJAG00000020280	Celf1	83	59.882	Jaculus_jaculus
ENSXCOG00000017706	-	73	63.356	ENSLBEG00000002047	-	85	62.887	Labrus_bergylta
ENSXCOG00000017706	-	82	73.510	ENSLBEG00000018296	celf1	74	73.667	Labrus_bergylta
ENSXCOG00000017706	-	54	59.896	ENSLACG00000018990	CELF1	69	59.669	Latimeria_chalumnae
ENSXCOG00000017706	-	87	61.972	ENSLOCG00000005966	celf1	83	58.974	Lepisosteus_oculatus
ENSXCOG00000017706	-	87	59.824	ENSLAFG00000003484	CELF1	83	59.587	Loxodonta_africana
ENSXCOG00000017706	-	87	59.942	ENSMFAG00000003505	CELF1	87	60.000	Macaca_fascicularis
ENSXCOG00000017706	-	86	60.177	ENSMMUG00000011657	CELF1	86	58.284	Macaca_mulatta
ENSXCOG00000017706	-	87	60.117	ENSMNEG00000022558	CELF1	87	60.000	Macaca_nemestrina
ENSXCOG00000017706	-	87	60.117	ENSMLEG00000040834	CELF1	87	58.284	Mandrillus_leucophaeus
ENSXCOG00000017706	-	87	59.810	ENSMAMG00000010052	celf1	87	70.609	Mastacembelus_armatus
ENSXCOG00000017706	-	87	67.751	ENSMZEG00005018307	celf1	84	67.857	Maylandia_zebra
ENSXCOG00000017706	-	87	59.238	ENSMGAG00000010629	CELF1	84	58.112	Meleagris_gallopavo
ENSXCOG00000017706	-	87	59.824	ENSMAUG00000009468	Celf1	87	59.706	Mesocricetus_auratus
ENSXCOG00000017706	-	87	59.942	ENSMICG00000045113	CELF1	83	60.000	Microcebus_murinus
ENSXCOG00000017706	-	87	60.117	ENSMOCG00000012633	Celf1	87	60.000	Microtus_ochrogaster
ENSXCOG00000017706	-	87	66.568	ENSMMOG00000015460	celf1	83	66.667	Mola_mola
ENSXCOG00000017706	-	87	60.704	ENSMODG00000019913	CELF1	88	60.472	Monodelphis_domestica
ENSXCOG00000017706	-	87	60.117	MGP_CAROLIEiJ_G0023949	Celf1	87	60.000	Mus_caroli
ENSXCOG00000017706	-	87	60.117	ENSMUSG00000005506	Celf1	87	60.000	Mus_musculus
ENSXCOG00000017706	-	87	60.117	MGP_PahariEiJ_G0025385	Celf1	87	60.000	Mus_pahari
ENSXCOG00000017706	-	87	57.478	MGP_SPRETEiJ_G0024859	Celf1	87	60.000	Mus_spretus
ENSXCOG00000017706	-	87	60.117	ENSMPUG00000003960	CELF1	77	59.882	Mustela_putorius_furo
ENSXCOG00000017706	-	90	58.689	ENSMLUG00000016631	CELF1	84	58.571	Myotis_lucifugus
ENSXCOG00000017706	-	94	55.584	ENSNGAG00000017390	Celf1	83	55.208	Nannospalax_galili
ENSXCOG00000017706	-	88	63.518	ENSNBRG00000023547	-	58	63.518	Neolamprologus_brichardi
ENSXCOG00000017706	-	86	60.177	ENSNLEG00000014638	CELF1	87	58.284	Nomascus_leucogenys
ENSXCOG00000017706	-	87	60.704	ENSMEUG00000007763	CELF1	87	60.472	Notamacropus_eugenii
ENSXCOG00000017706	-	87	59.824	ENSOPRG00000003239	-	87	59.587	Ochotona_princeps
ENSXCOG00000017706	-	87	60.117	ENSODEG00000015204	CELF1	83	59.882	Octodon_degus
ENSXCOG00000017706	-	87	67.160	ENSONIG00000008300	celf1	84	66.469	Oreochromis_niloticus
ENSXCOG00000017706	-	87	60.819	ENSOANG00000007896	CELF1	82	60.882	Ornithorhynchus_anatinus
ENSXCOG00000017706	-	87	59.531	ENSOCUG00000001311	CELF1	83	58.997	Oryctolagus_cuniculus
ENSXCOG00000017706	-	87	57.726	ENSOMEG00000002381	celf1	88	59.941	Oryzias_melastigma
ENSXCOG00000017706	-	89	58.571	ENSOGAG00000011600	CELF1	84	58.621	Otolemur_garnettii
ENSXCOG00000017706	-	89	59.143	ENSOARG00000006924	CELF1	87	60.177	Ovis_aries
ENSXCOG00000017706	-	87	60.117	ENSPPAG00000033870	CELF1	87	60.000	Pan_paniscus
ENSXCOG00000017706	-	87	60.117	ENSPPRG00000002376	CELF1	87	59.882	Panthera_pardus
ENSXCOG00000017706	-	87	60.117	ENSPTIG00000003974	CELF1	87	59.882	Panthera_tigris_altaica
ENSXCOG00000017706	-	87	59.942	ENSPTRG00000052299	CELF1	87	60.000	Pan_troglodytes
ENSXCOG00000017706	-	87	59.942	ENSPANG00000021676	CELF1	83	60.000	Papio_anubis
ENSXCOG00000017706	-	94	57.527	ENSPKIG00000012324	celf1	88	60.831	Paramormyrops_kingsleyae
ENSXCOG00000017706	-	86	57.310	ENSPSIG00000003922	CELF1	83	55.718	Pelodiscus_sinensis
ENSXCOG00000017706	-	87	57.233	ENSPMGG00000013192	celf1	83	58.567	Periophthalmus_magnuspinnatus
ENSXCOG00000017706	-	87	60.117	ENSPEMG00000015644	Celf1	87	60.000	Peromyscus_maniculatus_bairdii
ENSXCOG00000017706	-	87	60.997	ENSPCIG00000022947	CELF1	85	60.767	Phascolarctos_cinereus
ENSXCOG00000017706	-	73	71.280	ENSPFOG00000000961	-	87	70.242	Poecilia_formosa
ENSXCOG00000017706	-	92	73.410	ENSPLAG00000019373	-	86	73.410	Poecilia_latipinna
ENSXCOG00000017706	-	87	78.931	ENSPREG00000022185	-	82	77.987	Poecilia_reticulata
ENSXCOG00000017706	-	87	59.357	ENSPPYG00000003302	CELF1	83	59.118	Pongo_abelii
ENSXCOG00000017706	-	87	58.358	ENSPCAG00000002631	CELF1	87	58.112	Procavia_capensis
ENSXCOG00000017706	-	87	59.942	ENSPCOG00000021865	CELF1	67	60.000	Propithecus_coquereli
ENSXCOG00000017706	-	87	60.117	ENSPVAG00000007340	CELF1	80	59.882	Pteropus_vampyrus
ENSXCOG00000017706	-	80	75.357	ENSPNYG00000023719	-	76	70.922	Pundamilia_nyererei
ENSXCOG00000017706	-	87	62.079	ENSPNAG00000013418	celf1	82	62.147	Pygocentrus_nattereri
ENSXCOG00000017706	-	87	59.942	ENSRNOG00000010379	Celf1	87	60.000	Rattus_norvegicus
ENSXCOG00000017706	-	87	59.942	ENSRBIG00000042406	CELF1	83	60.000	Rhinopithecus_bieti
ENSXCOG00000017706	-	87	60.117	ENSRROG00000032588	CELF1	83	59.882	Rhinopithecus_roxellana
ENSXCOG00000017706	-	87	48.387	ENSSBOG00000021912	CELF1	81	48.368	Saimiri_boliviensis_boliviensis
ENSXCOG00000017706	-	87	60.526	ENSSHAG00000017438	CELF1	87	60.588	Sarcophilus_harrisii
ENSXCOG00000017706	-	87	64.602	ENSSFOG00015019353	celf1	81	64.095	Scleropages_formosus
ENSXCOG00000017706	-	87	67.847	ENSSMAG00000013827	celf1	82	67.953	Scophthalmus_maximus
ENSXCOG00000017706	-	87	68.142	ENSSDUG00000011558	celf1	82	68.249	Seriola_dumerili
ENSXCOG00000017706	-	87	67.847	ENSSLDG00000012863	celf1	84	67.953	Seriola_lalandi_dorsalis
ENSXCOG00000017706	-	87	51.613	ENSSARG00000003207	CELF1	87	53.392	Sorex_araneus
ENSXCOG00000017706	-	87	59.593	ENSSPUG00000004228	CELF1	83	57.895	Sphenodon_punctatus
ENSXCOG00000017706	-	87	67.826	ENSSPAG00000009569	celf1	88	68.129	Stegastes_partitus
ENSXCOG00000017706	-	87	62.813	ENSSSCG00000013233	CELF1	87	59.882	Sus_scrofa
ENSXCOG00000017706	-	87	60.174	ENSTGUG00000010377	CELF1	83	57.143	Taeniopygia_guttata
ENSXCOG00000017706	-	55	75.263	ENSTRUG00000000617	celf1	53	86.301	Takifugu_rubripes
ENSXCOG00000017706	-	87	60.117	ENSTTRG00000014157	CELF1	87	59.882	Tursiops_truncatus
ENSXCOG00000017706	-	80	65.993	ENSUAMG00000000223	CELF1	90	65.763	Ursus_americanus
ENSXCOG00000017706	-	87	60.117	ENSUMAG00000009218	CELF1	83	59.882	Ursus_maritimus
ENSXCOG00000017706	-	55	74.346	ENSVPAG00000000336	CELF1	55	74.033	Vicugna_pacos
ENSXCOG00000017706	-	87	60.117	ENSVVUG00000023439	CELF1	87	59.882	Vulpes_vulpes
ENSXCOG00000017706	-	87	57.102	ENSXETG00000009044	celf1	88	56.034	Xenopus_tropicalis
ENSXCOG00000017706	-	87	73.926	ENSXMAG00000029339	-	88	73.926	Xiphophorus_maculatus