EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017726 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: si:ch211-256m1.8
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5153 bases
Position: chrKQ557208.1:6784662-6789814
Accession: ZDB-GENE-131127-417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023737	tRNA-synt_2	PF00152.20	5.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024021	-	4734	-	ENSXCOP00000023737	1577 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017726	si:ch211-256m1.8	100	77.574	ENSAPOG00000007012	si:ch211-256m1.8	100	77.574	Acanthochromis_polyacanthus
ENSXCOG00000017726	si:ch211-256m1.8	100	77.827	ENSAOCG00000012258	si:ch211-256m1.8	100	77.827	Amphiprion_ocellaris
ENSXCOG00000017726	si:ch211-256m1.8	100	77.701	ENSAPEG00000002724	si:ch211-256m1.8	100	77.701	Amphiprion_percula
ENSXCOG00000017726	si:ch211-256m1.8	100	78.206	ENSATEG00000006278	si:ch211-256m1.8	100	78.206	Anabas_testudineus
ENSXCOG00000017726	si:ch211-256m1.8	100	77.890	ENSACLG00000011503	si:ch211-256m1.8	100	77.890	Astatotilapia_calliptera
ENSXCOG00000017726	si:ch211-256m1.8	100	67.712	ENSAMXG00000038245	si:ch211-256m1.8	100	67.712	Astyanax_mexicanus
ENSXCOG00000017726	si:ch211-256m1.8	100	73.568	ENSCSEG00000006255	si:ch211-256m1.8	100	73.568	Cynoglossus_semilaevis
ENSXCOG00000017726	si:ch211-256m1.8	100	87.460	ENSCVAG00000003376	si:ch211-256m1.8	100	87.460	Cyprinodon_variegatus
ENSXCOG00000017726	si:ch211-256m1.8	100	65.804	ENSDARG00000055172	si:ch211-256m1.8	100	65.804	Danio_rerio
ENSXCOG00000017726	si:ch211-256m1.8	100	68.352	ENSELUG00000010546	si:ch211-256m1.8	100	68.352	Esox_lucius
ENSXCOG00000017726	si:ch211-256m1.8	100	86.384	ENSFHEG00000005847	si:ch211-256m1.8	100	86.384	Fundulus_heteroclitus
ENSXCOG00000017726	si:ch211-256m1.8	100	97.400	ENSGAFG00000010269	si:ch211-256m1.8	100	97.400	Gambusia_affinis
ENSXCOG00000017726	si:ch211-256m1.8	100	78.080	ENSHBUG00000014407	si:ch211-256m1.8	100	78.080	Haplochromis_burtoni
ENSXCOG00000017726	si:ch211-256m1.8	100	71.881	ENSHCOG00000006884	si:ch211-256m1.8	100	72.189	Hippocampus_comes
ENSXCOG00000017726	si:ch211-256m1.8	100	65.365	ENSIPUG00000022659	si:ch211-256m1.8	100	65.365	Ictalurus_punctatus
ENSXCOG00000017726	si:ch211-256m1.8	100	81.317	ENSKMAG00000016377	si:ch211-256m1.8	100	81.317	Kryptolebias_marmoratus
ENSXCOG00000017726	si:ch211-256m1.8	100	77.890	ENSLBEG00000010639	si:ch211-256m1.8	100	77.890	Labrus_bergylta
ENSXCOG00000017726	si:ch211-256m1.8	100	59.500	ENSLOCG00000011127	si:ch211-256m1.8	100	59.500	Lepisosteus_oculatus
ENSXCOG00000017726	si:ch211-256m1.8	99	76.982	ENSMAMG00000005651	si:ch211-256m1.8	99	76.982	Mastacembelus_armatus
ENSXCOG00000017726	si:ch211-256m1.8	100	77.953	ENSMZEG00005006924	si:ch211-256m1.8	100	77.953	Maylandia_zebra
ENSXCOG00000017726	si:ch211-256m1.8	100	73.300	ENSMMOG00000001736	si:ch211-256m1.8	100	73.300	Mola_mola
ENSXCOG00000017726	si:ch211-256m1.8	100	77.890	ENSNBRG00000005143	si:ch211-256m1.8	100	77.890	Neolamprologus_brichardi
ENSXCOG00000017726	si:ch211-256m1.8	100	76.709	ENSORLG00000022248	si:ch211-256m1.8	100	76.709	Oryzias_latipes
ENSXCOG00000017726	si:ch211-256m1.8	100	76.456	ENSORLG00020000214	si:ch211-256m1.8	100	76.456	Oryzias_latipes_hni
ENSXCOG00000017726	si:ch211-256m1.8	100	76.377	ENSORLG00015020297	si:ch211-256m1.8	100	76.377	Oryzias_latipes_hsok
ENSXCOG00000017726	si:ch211-256m1.8	100	76.884	ENSOMEG00000004519	si:ch211-256m1.8	100	76.884	Oryzias_melastigma
ENSXCOG00000017726	si:ch211-256m1.8	95	66.831	ENSPKIG00000007399	si:ch211-256m1.8	99	66.831	Paramormyrops_kingsleyae
ENSXCOG00000017726	si:ch211-256m1.8	100	66.414	ENSPMGG00000007698	si:ch211-256m1.8	100	66.414	Periophthalmus_magnuspinnatus
ENSXCOG00000017726	si:ch211-256m1.8	100	95.498	ENSPFOG00000005178	si:ch211-256m1.8	100	95.498	Poecilia_formosa
ENSXCOG00000017726	si:ch211-256m1.8	100	95.371	ENSPLAG00000006872	si:ch211-256m1.8	100	95.371	Poecilia_latipinna
ENSXCOG00000017726	si:ch211-256m1.8	100	95.308	ENSPMEG00000021815	si:ch211-256m1.8	100	95.308	Poecilia_mexicana
ENSXCOG00000017726	si:ch211-256m1.8	100	94.610	ENSPREG00000018669	si:ch211-256m1.8	100	94.610	Poecilia_reticulata
ENSXCOG00000017726	si:ch211-256m1.8	100	77.953	ENSPNYG00000018038	si:ch211-256m1.8	100	77.953	Pundamilia_nyererei
ENSXCOG00000017726	si:ch211-256m1.8	99	66.205	ENSPNAG00000018965	-	99	66.205	Pygocentrus_nattereri
ENSXCOG00000017726	si:ch211-256m1.8	99	67.630	ENSPNAG00000003552	si:ch211-256m1.8	99	67.630	Pygocentrus_nattereri
ENSXCOG00000017726	si:ch211-256m1.8	100	64.547	ENSSFOG00015008344	si:ch211-256m1.8	100	64.547	Scleropages_formosus
ENSXCOG00000017726	si:ch211-256m1.8	100	78.269	ENSSMAG00000007562	si:ch211-256m1.8	100	78.269	Scophthalmus_maximus
ENSXCOG00000017726	si:ch211-256m1.8	100	79.924	ENSSDUG00000018180	si:ch211-256m1.8	100	79.924	Seriola_dumerili
ENSXCOG00000017726	si:ch211-256m1.8	100	80.051	ENSSLDG00000020310	si:ch211-256m1.8	100	80.051	Seriola_lalandi_dorsalis
ENSXCOG00000017726	si:ch211-256m1.8	100	78.206	ENSSPAG00000013419	si:ch211-256m1.8	100	78.206	Stegastes_partitus
ENSXCOG00000017726	si:ch211-256m1.8	100	68.265	ENSTRUG00000023803	si:ch211-256m1.8	100	68.265	Takifugu_rubripes
ENSXCOG00000017726	si:ch211-256m1.8	100	99.112	ENSXMAG00000026576	si:ch211-256m1.8	100	99.112	Xiphophorus_maculatus