EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017792 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4094 bases
Position: chrKQ557223.1:5585137-5589230
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023817	RRM_1	PF00076.22	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024101	-	387	-	ENSXCOP00000023817	128 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017792	-	65	67.470	ENSXCOG00000015127	-	89	67.470
ENSXCOG00000017792	-	68	65.517	ENSXCOG00000003220	-	75	65.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017792	-	65	69.880	ENSG00000116754	SRSF11	64	71.951	Homo_sapiens
ENSXCOG00000017792	-	91	72.414	ENSG00000153914	SREK1	98	78.571	Homo_sapiens
ENSXCOG00000017792	-	64	68.293	ENSAPOG00000004488	-	75	69.136	Acanthochromis_polyacanthus
ENSXCOG00000017792	-	65	66.265	ENSAPOG00000007244	-	60	66.265	Acanthochromis_polyacanthus
ENSXCOG00000017792	-	94	83.065	ENSACIG00000015055	-	98	83.065	Amphilophus_citrinellus
ENSXCOG00000017792	-	64	68.293	ENSACIG00000018075	-	75	69.136	Amphilophus_citrinellus
ENSXCOG00000017792	-	65	67.470	ENSACIG00000012348	-	87	67.470	Amphilophus_citrinellus
ENSXCOG00000017792	-	74	91.579	ENSAOCG00000024368	-	94	91.579	Amphiprion_ocellaris
ENSXCOG00000017792	-	63	67.901	ENSAOCG00000000739	-	86	67.901	Amphiprion_ocellaris
ENSXCOG00000017792	-	66	97.647	ENSAPEG00000002218	-	92	97.647	Amphiprion_percula
ENSXCOG00000017792	-	69	63.636	ENSAPEG00000003142	SRSF11	91	63.636	Amphiprion_percula
ENSXCOG00000017792	-	64	68.293	ENSAPEG00000003619	SRSF11	75	69.136	Amphiprion_percula
ENSXCOG00000017792	-	64	68.293	ENSATEG00000007534	-	75	69.136	Anabas_testudineus
ENSXCOG00000017792	-	66	67.857	ENSATEG00000011691	srsf11	77	66.265	Anabas_testudineus
ENSXCOG00000017792	-	67	94.186	ENSATEG00000009464	-	92	94.186	Anabas_testudineus
ENSXCOG00000017792	-	100	69.531	ENSANAG00000031358	SREK1	98	79.592	Aotus_nancymaae
ENSXCOG00000017792	-	64	67.073	ENSACLG00000000623	srsf11	84	67.073	Astatotilapia_calliptera
ENSXCOG00000017792	-	63	90.123	ENSBTAG00000007321	SREK1	98	79.592	Bos_taurus
ENSXCOG00000017792	-	73	81.915	ENSCJAG00000015950	SREK1	98	79.592	Callithrix_jacchus
ENSXCOG00000017792	-	65	69.880	ENSCAFG00020017255	-	74	70.238	Canis_lupus_dingo
ENSXCOG00000017792	-	91	73.276	ENSCAFG00020019449	-	98	79.592	Canis_lupus_dingo
ENSXCOG00000017792	-	63	90.123	ENSCHIG00000025052	-	98	79.592	Capra_hircus
ENSXCOG00000017792	-	65	69.880	ENSCHIG00000025295	SRSF11	71	70.238	Capra_hircus
ENSXCOG00000017792	-	91	73.276	ENSTSYG00000036957	SREK1	98	79.592	Carlito_syrichta
ENSXCOG00000017792	-	65	67.470	ENSTSYG00000033270	-	59	67.857	Carlito_syrichta
ENSXCOG00000017792	-	100	69.531	ENSCCAG00000020591	SREK1	98	79.592	Cebus_capucinus
ENSXCOG00000017792	-	67	86.047	ENSCATG00000031482	SREK1	98	78.571	Cercocebus_atys
ENSXCOG00000017792	-	91	54.701	ENSCPBG00000022430	-	89	54.701	Chrysemys_picta_bellii
ENSXCOG00000017792	-	100	67.164	ENSCPBG00000026866	SREK1	100	67.164	Chrysemys_picta_bellii
ENSXCOG00000017792	-	69	84.091	ENSCANG00000030421	SREK1	98	78.571	Colobus_angolensis_palliatus
ENSXCOG00000017792	-	100	84.211	ENSCSEG00000013934	-	100	84.211	Cynoglossus_semilaevis
ENSXCOG00000017792	-	94	83.740	ENSCVAG00000002404	-	98	83.740	Cyprinodon_variegatus
ENSXCOG00000017792	-	65	66.265	ENSDARG00000098574	srsf11	91	66.265	Danio_rerio
ENSXCOG00000017792	-	91	75.000	ENSDORG00000023160	-	100	69.173	Dipodomys_ordii
ENSXCOG00000017792	-	65	69.880	ENSEASG00005007847	SRSF11	74	70.238	Equus_asinus_asinus
ENSXCOG00000017792	-	91	73.276	ENSEASG00005006832	-	100	67.669	Equus_asinus_asinus
ENSXCOG00000017792	-	91	73.276	ENSECAG00000035731	-	100	67.669	Equus_caballus
ENSXCOG00000017792	-	63	90.123	ENSFCAG00000036884	-	98	79.592	Felis_catus
ENSXCOG00000017792	-	68	67.816	ENSFCAG00000034448	-	65	71.951	Felis_catus
ENSXCOG00000017792	-	94	76.613	ENSFHEG00000020959	-	96	76.613	Fundulus_heteroclitus
ENSXCOG00000017792	-	73	79.798	ENSGALG00000043541	SREK1	98	79.798	Gallus_gallus
ENSXCOG00000017792	-	94	99.167	ENSGAFG00000001732	-	98	99.167	Gambusia_affinis
ENSXCOG00000017792	-	64	73.171	ENSGAGG00000022411	-	80	73.171	Gopherus_agassizii
ENSXCOG00000017792	-	100	67.164	ENSGAGG00000006087	SREK1	100	67.164	Gopherus_agassizii
ENSXCOG00000017792	-	91	72.414	ENSGGOG00000004737	SREK1	98	78.571	Gorilla_gorilla
ENSXCOG00000017792	-	97	80.315	ENSHBUG00000007082	-	93	80.315	Haplochromis_burtoni
ENSXCOG00000017792	-	64	67.073	ENSHCOG00000016860	-	84	67.073	Hippocampus_comes
ENSXCOG00000017792	-	63	92.593	ENSHCOG00000017228	-	80	91.860	Hippocampus_comes
ENSXCOG00000017792	-	63	90.123	ENSSTOG00000008850	SREK1	98	79.592	Ictidomys_tridecemlineatus
ENSXCOG00000017792	-	91	74.138	ENSJJAG00000008846	-	92	72.500	Jaculus_jaculus
ENSXCOG00000017792	-	65	66.265	ENSLBEG00000024167	srsf11	84	67.073	Labrus_bergylta
ENSXCOG00000017792	-	100	77.536	ENSLBEG00000022954	-	100	77.536	Labrus_bergylta
ENSXCOG00000017792	-	91	72.414	ENSMFAG00000039823	SREK1	98	78.571	Macaca_fascicularis
ENSXCOG00000017792	-	67	86.047	ENSMMUG00000014586	SREK1	91	77.778	Macaca_mulatta
ENSXCOG00000017792	-	67	86.047	ENSMNEG00000030723	SREK1	98	78.571	Macaca_nemestrina
ENSXCOG00000017792	-	63	88.889	ENSMLEG00000039078	SREK1	98	78.571	Mandrillus_leucophaeus
ENSXCOG00000017792	-	64	68.293	ENSMAMG00000015002	-	76	69.136	Mastacembelus_armatus
ENSXCOG00000017792	-	74	92.632	ENSMAMG00000003099	-	90	92.632	Mastacembelus_armatus
ENSXCOG00000017792	-	87	81.579	ENSMZEG00005005707	-	88	81.579	Maylandia_zebra
ENSXCOG00000017792	-	63	90.123	ENSMICG00000034959	SREK1	98	78.571	Microcebus_murinus
ENSXCOG00000017792	-	70	64.444	ENSMMOG00000008877	-	87	64.444	Mola_mola
ENSXCOG00000017792	-	65	68.675	ENSMMOG00000016751	-	78	68.675	Mola_mola
ENSXCOG00000017792	-	66	96.471	ENSMALG00000017086	srek1	96	96.471	Monopterus_albus
ENSXCOG00000017792	-	64	68.293	ENSMALG00000016608	srsf11	84	68.293	Monopterus_albus
ENSXCOG00000017792	-	64	71.951	MGP_CAROLIEiJ_G0025767	Srsf11	82	71.951	Mus_caroli
ENSXCOG00000017792	-	64	71.951	ENSMUSG00000055436	Srsf11	81	71.951	Mus_musculus
ENSXCOG00000017792	-	64	71.951	MGP_PahariEiJ_G0027217	Srsf11	82	71.951	Mus_pahari
ENSXCOG00000017792	-	64	71.951	MGP_SPRETEiJ_G0026719	Srsf11	82	71.951	Mus_spretus
ENSXCOG00000017792	-	91	75.000	ENSNGAG00000014631	-	100	69.173	Nannospalax_galili
ENSXCOG00000017792	-	65	67.470	ENSNBRG00000020213	-	87	67.470	Neolamprologus_brichardi
ENSXCOG00000017792	-	97	80.315	ENSNBRG00000010656	-	93	80.315	Neolamprologus_brichardi
ENSXCOG00000017792	-	69	84.091	ENSNLEG00000003827	SREK1	98	78.571	Nomascus_leucogenys
ENSXCOG00000017792	-	91	73.276	ENSODEG00000016218	-	95	79.592	Octodon_degus
ENSXCOG00000017792	-	80	59.223	ENSORLG00000030366	-	88	59.223	Oryzias_latipes
ENSXCOG00000017792	-	59	96.053	ENSORLG00000002711	-	63	96.053	Oryzias_latipes
ENSXCOG00000017792	-	80	59.223	ENSORLG00020009393	-	88	59.223	Oryzias_latipes_hni
ENSXCOG00000017792	-	91	77.586	ENSORLG00020012815	-	90	78.333	Oryzias_latipes_hni
ENSXCOG00000017792	-	94	78.333	ENSORLG00015020455	-	94	78.333	Oryzias_latipes_hsok
ENSXCOG00000017792	-	80	59.223	ENSORLG00015009374	-	88	59.223	Oryzias_latipes_hsok
ENSXCOG00000017792	-	91	72.414	ENSPPAG00000031605	SREK1	91	77.778	Pan_paniscus
ENSXCOG00000017792	-	63	90.123	ENSPPRG00000024617	SREK1	98	79.592	Panthera_pardus
ENSXCOG00000017792	-	63	90.123	ENSPTIG00000006608	SREK1	98	79.592	Panthera_tigris_altaica
ENSXCOG00000017792	-	91	72.414	ENSPTRG00000016936	SREK1	98	78.571	Pan_troglodytes
ENSXCOG00000017792	-	91	72.414	ENSPANG00000008953	SREK1	98	78.571	Papio_anubis
ENSXCOG00000017792	-	65	66.265	ENSPKIG00000021576	-	87	66.265	Paramormyrops_kingsleyae
ENSXCOG00000017792	-	67	89.535	ENSPMGG00000017029	-	75	89.535	Periophthalmus_magnuspinnatus
ENSXCOG00000017792	-	65	66.265	ENSPMGG00000000954	-	78	66.265	Periophthalmus_magnuspinnatus
ENSXCOG00000017792	-	66	65.476	ENSPMGG00000005045	-	74	65.476	Periophthalmus_magnuspinnatus
ENSXCOG00000017792	-	63	69.136	ENSPLAG00000009484	-	56	69.136	Poecilia_latipinna
ENSXCOG00000017792	-	98	95.276	ENSPLAG00000008818	-	93	95.276	Poecilia_latipinna
ENSXCOG00000017792	-	98	95.276	ENSPLAG00000014609	-	93	95.276	Poecilia_latipinna
ENSXCOG00000017792	-	66	65.476	ENSPMEG00000018837	srsf11	69	65.476	Poecilia_mexicana
ENSXCOG00000017792	-	98	95.276	ENSPMEG00000006824	-	93	95.276	Poecilia_mexicana
ENSXCOG00000017792	-	64	68.293	ENSPMEG00000023453	-	56	69.136	Poecilia_mexicana
ENSXCOG00000017792	-	98	95.276	ENSPMEG00000006607	-	93	95.276	Poecilia_mexicana
ENSXCOG00000017792	-	94	83.740	ENSPREG00000019922	-	98	83.740	Poecilia_reticulata
ENSXCOG00000017792	-	91	73.276	ENSPCOG00000026230	SREK1	98	79.592	Propithecus_coquereli
ENSXCOG00000017792	-	97	80.315	ENSPNYG00000007178	-	93	80.315	Pundamilia_nyererei
ENSXCOG00000017792	-	91	72.414	ENSRBIG00000033818	SREK1	98	78.571	Rhinopithecus_bieti
ENSXCOG00000017792	-	68	67.816	ENSRBIG00000042971	SRSF11	68	68.182	Rhinopithecus_bieti
ENSXCOG00000017792	-	69	84.091	ENSRROG00000017210	SREK1	98	78.571	Rhinopithecus_roxellana
ENSXCOG00000017792	-	68	67.816	ENSSBOG00000033461	SRSF11	68	68.182	Saimiri_boliviensis_boliviensis
ENSXCOG00000017792	-	100	69.531	ENSSBOG00000031230	SREK1	98	79.592	Saimiri_boliviensis_boliviensis
ENSXCOG00000017792	-	74	61.053	ENSSFOG00015016086	-	85	61.053	Scleropages_formosus
ENSXCOG00000017792	-	74	91.579	ENSSDUG00000010395	-	92	91.579	Seriola_dumerili
ENSXCOG00000017792	-	64	68.293	ENSSLDG00000012105	-	75	69.136	Seriola_lalandi_dorsalis
ENSXCOG00000017792	-	74	91.579	ENSSLDG00000016285	-	92	91.579	Seriola_lalandi_dorsalis
ENSXCOG00000017792	-	64	67.073	ENSSLDG00000015477	-	84	67.073	Seriola_lalandi_dorsalis
ENSXCOG00000017792	-	70	94.444	ENSSPAG00000022310	-	89	94.444	Stegastes_partitus
ENSXCOG00000017792	-	65	67.470	ENSSPAG00000016483	-	66	67.470	Stegastes_partitus
ENSXCOG00000017792	-	94	80.645	ENSTRUG00000022058	-	98	80.645	Takifugu_rubripes
ENSXCOG00000017792	-	63	90.123	ENSUAMG00000022662	-	91	78.788	Ursus_americanus
ENSXCOG00000017792	-	68	67.816	ENSUAMG00000008403	-	70	67.033	Ursus_americanus
ENSXCOG00000017792	-	91	73.276	ENSVVUG00000005888	-	98	79.592	Vulpes_vulpes
ENSXCOG00000017792	-	94	100.000	ENSXMAG00000028210	-	98	100.000	Xiphophorus_maculatus
ENSXCOG00000017792	-	64	68.293	ENSXMAG00000019180	SRSF11	54	68.293	Xiphophorus_maculatus