EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000017793 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2531 bases
Position: chrKQ557223.1:5589670-5592200
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000023819	RRM_1	PF00076.22	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024103	-	552	-	ENSXCOP00000023819	183 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000017793	srek1	58	31.818	ENSXCOG00000010968	ncbp2	67	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017793	srek1	95	78.090	ENSG00000153914	SREK1	75	91.111	Homo_sapiens
ENSXCOG00000017793	srek1	99	87.634	ENSACIG00000015041	srek1	99	87.634	Amphilophus_citrinellus
ENSXCOG00000017793	srek1	97	77.473	ENSANAG00000031358	SREK1	93	77.473	Aotus_nancymaae
ENSXCOG00000017793	srek1	99	88.462	ENSACLG00000026754	srek1	62	88.462	Astatotilapia_calliptera
ENSXCOG00000017793	srek1	97	77.473	ENSCJAG00000015950	SREK1	93	77.473	Callithrix_jacchus
ENSXCOG00000017793	srek1	95	72.928	ENSCAFG00020019448	-	91	72.928	Canis_lupus_dingo
ENSXCOG00000017793	srek1	97	76.757	ENSTSYG00000036957	SREK1	93	76.757	Carlito_syrichta
ENSXCOG00000017793	srek1	99	76.216	ENSCATG00000031482	SREK1	93	77.473	Cercocebus_atys
ENSXCOG00000017793	srek1	78	83.448	ENSCPBG00000026866	SREK1	53	77.401	Chrysemys_picta_bellii
ENSXCOG00000017793	srek1	99	76.216	ENSCANG00000030421	SREK1	93	77.473	Colobus_angolensis_palliatus
ENSXCOG00000017793	srek1	100	90.710	ENSCVAG00000002411	srek1	89	90.710	Cyprinodon_variegatus
ENSXCOG00000017793	srek1	97	77.473	ENSDORG00000023425	-	93	77.473	Dipodomys_ordii
ENSXCOG00000017793	srek1	97	76.757	ENSEASG00005006829	-	93	76.757	Equus_asinus_asinus
ENSXCOG00000017793	srek1	97	76.757	ENSECAG00000036994	-	93	76.757	Equus_caballus
ENSXCOG00000017793	srek1	54	80.392	ENSGALG00000043541	SREK1	53	72.388	Gallus_gallus
ENSXCOG00000017793	srek1	99	76.216	ENSGGOG00000004737	SREK1	93	77.473	Gorilla_gorilla
ENSXCOG00000017793	srek1	99	88.462	ENSHBUG00000007057	srek1	99	88.462	Haplochromis_burtoni
ENSXCOG00000017793	srek1	97	83.616	ENSHCOG00000017240	SREK1	53	83.616	Hippocampus_comes
ENSXCOG00000017793	srek1	97	77.473	ENSJJAG00000000214	-	93	77.473	Jaculus_jaculus
ENSXCOG00000017793	srek1	97	86.441	ENSLBEG00000022980	srek1	90	86.441	Labrus_bergylta
ENSXCOG00000017793	srek1	99	76.216	ENSMFAG00000039823	SREK1	93	77.473	Macaca_fascicularis
ENSXCOG00000017793	srek1	99	76.216	ENSMNEG00000030723	SREK1	93	77.473	Macaca_nemestrina
ENSXCOG00000017793	srek1	99	76.216	ENSMLEG00000039078	SREK1	93	77.473	Mandrillus_leucophaeus
ENSXCOG00000017793	srek1	99	88.462	ENSMZEG00005005719	srek1	99	88.462	Maylandia_zebra
ENSXCOG00000017793	srek1	69	75.781	ENSMGAG00000002047	SREK1	68	67.416	Meleagris_gallopavo
ENSXCOG00000017793	srek1	95	75.556	ENSMAUG00000010066	-	57	76.243	Mesocricetus_auratus
ENSXCOG00000017793	srek1	97	77.473	ENSMICG00000034959	SREK1	93	77.473	Microcebus_murinus
ENSXCOG00000017793	srek1	95	75.556	ENSMOCG00000001536	-	56	76.243	Microtus_ochrogaster
ENSXCOG00000017793	srek1	97	85.000	ENSMMOG00000008409	srek1	91	85.000	Mola_mola
ENSXCOG00000017793	srek1	98	74.595	ENSNGAG00000017527	-	93	75.676	Nannospalax_galili
ENSXCOG00000017793	srek1	99	87.500	ENSNBRG00000010718	srek1	99	87.500	Neolamprologus_brichardi
ENSXCOG00000017793	srek1	96	89.773	ENSONIG00000011080	srek1	50	88.827	Oreochromis_niloticus
ENSXCOG00000017793	srek1	97	86.813	ENSORLG00015020471	srek1	94	86.813	Oryzias_latipes_hsok
ENSXCOG00000017793	srek1	99	76.216	ENSPPAG00000031605	SREK1	93	77.473	Pan_paniscus
ENSXCOG00000017793	srek1	99	76.216	ENSPTRG00000016936	SREK1	93	77.473	Pan_troglodytes
ENSXCOG00000017793	srek1	99	76.216	ENSPANG00000008953	SREK1	93	77.473	Papio_anubis
ENSXCOG00000017793	srek1	98	82.778	ENSPMGG00000017031	srek1	100	82.778	Periophthalmus_magnuspinnatus
ENSXCOG00000017793	srek1	95	75.556	ENSPEMG00000024051	-	58	76.243	Peromyscus_maniculatus_bairdii
ENSXCOG00000017793	srek1	97	78.022	ENSPCIG00000017750	-	93	78.022	Phascolarctos_cinereus
ENSXCOG00000017793	srek1	97	93.258	ENSPLAG00000008827	srek1	100	93.258	Poecilia_latipinna
ENSXCOG00000017793	srek1	93	92.398	ENSPREG00000019912	srek1	98	92.398	Poecilia_reticulata
ENSXCOG00000017793	srek1	97	77.473	ENSPCOG00000026230	SREK1	93	77.473	Propithecus_coquereli
ENSXCOG00000017793	srek1	97	76.344	ENSRBIG00000033818	SREK1	93	76.344	Rhinopithecus_bieti
ENSXCOG00000017793	srek1	99	76.216	ENSRROG00000017210	SREK1	93	77.473	Rhinopithecus_roxellana
ENSXCOG00000017793	srek1	97	77.473	ENSSBOG00000031230	SREK1	93	77.473	Saimiri_boliviensis_boliviensis
ENSXCOG00000017793	srek1	97	75.691	ENSSPUG00000016553	SREK1	58	75.691	Sphenodon_punctatus
ENSXCOG00000017793	srek1	97	89.266	ENSSPAG00000022298	srek1	98	89.266	Stegastes_partitus
ENSXCOG00000017793	srek1	99	80.663	ENSTRUG00000002960	srek1	98	80.663	Takifugu_rubripes
ENSXCOG00000017793	srek1	97	77.473	ENSUAMG00000022661	-	93	77.473	Ursus_americanus
ENSXCOG00000017793	srek1	80	83.221	ENSVVUG00000005890	-	75	83.221	Vulpes_vulpes