EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000017871 (Gene tree)
Gene ID
-
Gene Symbol
zgc:113343
Alias
-
Full Name
zgc:113343
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
4673 bases
Position
chrKQ557202.1:1449464-1454136
Accession
ZDB-GENE-050327-90
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5419
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5429
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5439
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5449
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5459
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5469
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5479
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5489
ENSXCOP00000023935zf-C2H2PF00096.265.8e-5499
ENSXCOP00000023935zf-metPF12874.71.7e-1913
ENSXCOP00000023935zf-metPF12874.71.7e-1923
ENSXCOP00000023935zf-metPF12874.71.7e-1933
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000024219-1449-ENSXCOP00000023935482 (aa)--
Gene Model
Click here to download ENSXCOG00000017871's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017871's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000017871zgc:1133436535.238ENSXCOG00000000036znf3415944.000
ENSXCOG00000017871zgc:1133436644.298ENSXCOG00000006553-8644.298
ENSXCOG00000017871zgc:1133437238.298ENSXCOG00000009772-9538.298
ENSXCOG00000017871zgc:1133436542.958ENSXCOG00000007414-9242.586
ENSXCOG00000017871zgc:1133437845.024ENSXCOG00000003484-7140.206
ENSXCOG00000017871zgc:1133436348.571ENSXCOG00000010950si:dkey-210j14.36048.571
ENSXCOG00000017871zgc:1133436643.386ENSXCOG00000010488-5943.386
ENSXCOG00000017871zgc:1133436643.262ENSXCOG00000006614-9243.262
ENSXCOG00000017871zgc:1133436340.408ENSXCOG00000009785-6340.408
ENSXCOG00000017871zgc:1133436643.310ENSXCOG00000001226-8842.574
ENSXCOG00000017871zgc:1133437147.183ENSXCOG00000009003-9445.513
ENSXCOG00000017871zgc:1133437739.592ENSXCOG00000016307-9644.167
ENSXCOG00000017871zgc:1133437146.154ENSXCOG00000019484-9438.976
ENSXCOG00000017871zgc:1133436641.014ENSXCOG00000003537-7941.014
ENSXCOG00000017871zgc:1133436445.411ENSXCOG00000003538-9845.411
ENSXCOG00000017871zgc:1133436746.154ENSXCOG00000010567-9242.994
ENSXCOG00000017871zgc:1133436743.168ENSXCOG00000016567-7946.250
ENSXCOG00000017871zgc:1133436545.283ENSXCOG00000003001-8832.639
ENSXCOG00000017871zgc:1133437546.281ENSXCOG00000002512-9046.281
ENSXCOG00000017871zgc:1133436745.749ENSXCOG00000003451-9444.615
ENSXCOG00000017871zgc:1133436544.954ENSXCOG00000013306-6544.954
ENSXCOG00000017871zgc:1133436440.594ENSXCOG00000002869-5737.742
ENSXCOG00000017871zgc:1133437144.615ENSXCOG00000007376-8847.619
ENSXCOG00000017871zgc:1133437643.813ENSXCOG00000008116-9945.749
ENSXCOG00000017871zgc:1133436644.681ENSXCOG00000011372-7044.681
ENSXCOG00000017871zgc:1133436339.852ENSXCOG00000009794-7439.852
ENSXCOG00000017871zgc:1133439342.029ENSXCOG00000003472-9240.367
ENSXCOG00000017871zgc:1133437943.590ENSXCOG00000009798-8443.590
ENSXCOG00000017871zgc:1133436643.396ENSXCOG00000014363-6143.396
ENSXCOG00000017871zgc:1133436542.403ENSXCOG00000007076-9941.935
ENSXCOG00000017871zgc:1133436640.226ENSXCOG00000003435-8940.226
ENSXCOG00000017871zgc:1133436844.048ENSXCOG00000019377-9344.048
ENSXCOG00000017871zgc:1133436545.918ENSXCOG00000007941-8845.918
ENSXCOG00000017871zgc:1133436842.969ENSXCOG00000003532-8442.969
ENSXCOG00000017871zgc:1133438042.812ENSXCOG00000007957-9042.812
ENSXCOG00000017871zgc:1133436347.619ENSXCOG00000012645-6147.619
ENSXCOG00000017871zgc:1133436347.826ENSXCOG00000009781-7047.826
ENSXCOG00000017871zgc:1133437145.973ENSXCOG00000001200-9445.973
ENSXCOG00000017871zgc:1133437645.133ENSXCOG00000019149znf5269244.361
ENSXCOG00000017871zgc:1133436547.399ENSXCOG00000000528-8547.399
ENSXCOG00000017871zgc:1133436944.788ENSXCOG00000007937-7544.788
ENSXCOG00000017871zgc:1133436645.263ENSXCOG00000007529-9842.294
ENSXCOG00000017871zgc:1133436439.306ENSXCOG00000009768-7639.306
ENSXCOG00000017871zgc:1133436445.631ENSXCOG00000000354-7045.631
ENSXCOG00000017871zgc:1133437038.194ENSXCOG00000007987-8138.542
ENSXCOG00000017871zgc:1133437246.454ENSXCOG00000016860-9944.444
ENSXCOG00000017871zgc:1133437046.640ENSXCOG00000002473-9546.640
ENSXCOG00000017871zgc:1133437144.000ENSXCOG00000003431-7944.000
ENSXCOG00000017871zgc:1133436547.619ENSXCOG00000003438-7547.619
ENSXCOG00000017871zgc:1133436446.768ENSXCOG00000016117-10046.768
ENSXCOG00000017871zgc:1133436347.748ENSXCOG00000009186-9147.748
ENSXCOG00000017871zgc:1133436543.986ENSXCOG00000015441-8943.986
ENSXCOG00000017871zgc:1133436544.565ENSXCOG00000015312-9444.565
ENSXCOG00000017871zgc:1133436641.333ENSXCOG00000019382-7741.333
ENSXCOG00000017871zgc:1133437046.154ENSXCOG00000012921-9645.669
ENSXCOG00000017871zgc:1133436648.214ENSXCOG00000012924-9648.214
ENSXCOG00000017871zgc:1133437037.037ENSXCOG00000015084snai28336.765
ENSXCOG00000017871zgc:1133436939.216ENSXCOG00000008567prdm59438.922
ENSXCOG00000017871zgc:1133437547.525ENSXCOG00000001116-9742.949
ENSXCOG00000017871zgc:1133436643.915ENSXCOG00000010576-7442.714
ENSXCOG00000017871zgc:1133437947.143ENSXCOG00000019443-9846.850
ENSXCOG00000017871zgc:1133436337.113ENSXCOG00000018315-9237.113
ENSXCOG00000017871zgc:1133436646.667ENSXCOG00000007945-9146.667
ENSXCOG00000017871zgc:1133436344.898ENSXCOG00000010259-5844.898
ENSXCOG00000017871zgc:1133437132.365ENSXCOG00000013066-8832.011
ENSXCOG00000017871zgc:1133436745.575ENSXCOG00000002898-8644.724
ENSXCOG00000017871zgc:1133436443.448ENSXCOG00000003441-6239.303
ENSXCOG00000017871zgc:1133436447.619ENSXCOG00000009674-8047.619
ENSXCOG00000017871zgc:1133436645.055ENSXCOG00000018615-9145.055
ENSXCOG00000017871zgc:1133436735.874ENSXCOG00000013504znf384l5338.542
ENSXCOG00000017871zgc:1133437043.386ENSXCOG00000003499-8341.558
ENSXCOG00000017871zgc:1133437440.000ENSXCOG00000008056-5740.000
ENSXCOG00000017871zgc:1133436446.186ENSXCOG00000006951-7846.186
ENSXCOG00000017871zgc:1133436647.727ENSXCOG00000007139-7647.015
ENSXCOG00000017871zgc:1133436645.238ENSXCOG00000011725-9644.531
ENSXCOG00000017871zgc:1133437344.203ENSXCOG00000007994-9545.136
ENSXCOG00000017871zgc:1133436943.725ENSXCOG00000007979-7839.769
ENSXCOG00000017871zgc:1133436258.000ENSXCOG00000007420-9758.000
ENSXCOG00000017871zgc:1133436241.509ENSXCOG00000017528snai1a9241.509
ENSXCOG00000017871zgc:1133436645.763ENSXCOG00000009997-5245.763
ENSXCOG00000017871zgc:1133436941.718ENSXCOG00000009668-8840.606
ENSXCOG00000017871zgc:1133436252.326ENSXCOG00000009665-9541.404
ENSXCOG00000017871zgc:1133436554.000ENSXCOG00000018799sall3b5254.000
ENSXCOG00000017871zgc:1133436452.632ENSXCOG00000008062-10044.000
ENSXCOG00000017871zgc:1133436237.736ENSXCOG00000019675scrt1b5337.736
ENSXCOG00000017871zgc:1133437442.508ENSXCOG00000001292-9244.848
ENSXCOG00000017871zgc:1133437037.265ENSXCOG00000003468-9637.433
ENSXCOG00000017871zgc:1133436243.478ENSXCOG00000015428-8943.478
ENSXCOG00000017871zgc:1133436841.739ENSXCOG00000013870-7641.739
ENSXCOG00000017871zgc:1133436245.679ENSXCOG00000015435-8145.679
ENSXCOG00000017871zgc:1133436347.436ENSXCOG00000005697-9347.436
ENSXCOG00000017871zgc:1133436640.893ENSXCOG00000019482-8141.016
ENSXCOG00000017871zgc:1133438350.725ENSXCOG00000007981-8843.701
ENSXCOG00000017871zgc:1133437342.045ENSXCOG00000003093-9842.045
ENSXCOG00000017871zgc:1133436340.678ENSXCOG00000001645si:dkey-89b17.49041.509
ENSXCOG00000017871zgc:1133437645.946ENSXCOG00000002955ZBTB145139.496
ENSXCOG00000017871zgc:1133436934.343ENSXCOG00000002714-9234.343
ENSXCOG00000017871zgc:1133436543.158ENSXCOG00000000254-6843.158
ENSXCOG00000017871zgc:1133436343.802ENSXCOG00000014360-6143.802
ENSXCOG00000017871zgc:1133436245.503ENSXCOG00000014361-6345.503
ENSXCOG00000017871zgc:1133436547.170ENSXCOG00000009777-5447.170
ENSXCOG00000017871zgc:1133436636.364ENSXCOG00000007499zbtb416834.256
ENSXCOG00000017871zgc:1133436847.783ENSXCOG00000002857-9547.863
ENSXCOG00000017871zgc:1133437341.256ENSXCOG00000007396-9941.256
ENSXCOG00000017871zgc:1133436641.935ENSXCOG00000020769-8341.935
ENSXCOG00000017871zgc:1133436645.000ENSXCOG00000020768-7545.000
ENSXCOG00000017871zgc:1133437244.695ENSXCOG00000007368-9444.695
ENSXCOG00000017871zgc:1133436737.410ENSXCOG00000015947-9935.522
ENSXCOG00000017871zgc:1133437147.239ENSXCOG00000008083-9446.341
ENSXCOG00000017871zgc:1133437342.009ENSXCOG00000003530-8542.009
ENSXCOG00000017871zgc:1133437143.842ENSXCOG00000008978-9843.842
ENSXCOG00000017871zgc:1133437140.336ENSXCOG00000013787-6640.336
ENSXCOG00000017871zgc:1133437947.249ENSXCOG00000017328-9647.249
ENSXCOG00000017871zgc:1133436539.806ENSXCOG00000008003-5740.566
ENSXCOG00000017871zgc:1133437142.995ENSXCOG00000019457-9342.396
ENSXCOG00000017871zgc:1133436348.592ENSXCOG00000003493-7348.592
ENSXCOG00000017871zgc:1133437350.000ENSXCOG00000006688znf3675450.000
ENSXCOG00000017871zgc:1133437039.634ENSXCOG00000009992zbtb47b8739.634
ENSXCOG00000017871zgc:1133436441.176ENSXCOG00000007413-6041.176
ENSXCOG00000017871zgc:1133436746.429ENSXCOG00000013004-7546.429
ENSXCOG00000017871zgc:1133437544.269ENSXCOG00000007406-9943.452
ENSXCOG00000017871zgc:1133437344.595ENSXCOG00000012458-7443.269
ENSXCOG00000017871zgc:1133436742.913ENSXCOG00000003896-6542.913
ENSXCOG00000017871zgc:1133437643.182ENSXCOG00000019481-9142.534
ENSXCOG00000017871zgc:1133436646.087ENSXCOG00000019492-9445.455
ENSXCOG00000017871zgc:1133436937.059ENSXCOG00000009597ZNF3198637.059
ENSXCOG00000017871zgc:1133436642.791ENSXCOG00000018253-9142.791
ENSXCOG00000017871zgc:1133437635.714ENSXCOG00000018117znf710b5635.714
ENSXCOG00000017871zgc:1133436542.675ENSXCOG00000019401-9545.714
ENSXCOG00000017871zgc:1133437045.882ENSXCOG00000010948-7545.882
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000017871zgc:1133437146.988ENSACIG00000007882-9742.857Amphilophus_citrinellus
ENSXCOG00000017871zgc:1133437145.000ENSACIG00000000360si:ch211-241b2.19345.806Amphilophus_citrinellus
ENSXCOG00000017871zgc:1133436443.333ENSACIG00000008886znf11648143.333Amphilophus_citrinellus
ENSXCOG00000017871zgc:1133436643.085ENSATEG00000008683si:ch211-241b2.17843.085Anabas_testudineus
ENSXCOG00000017871zgc:1133436643.353ENSACLG00000000521-9743.353Astatotilapia_calliptera
ENSXCOG00000017871zgc:1133436644.048ENSACLG00000024670-7244.048Astatotilapia_calliptera
ENSXCOG00000017871zgc:1133436638.750ENSACLG00000017449-6138.750Astatotilapia_calliptera
ENSXCOG00000017871zgc:1133436645.876ENSAMXG00000041650-8645.876Astyanax_mexicanus
ENSXCOG00000017871zgc:1133436944.749ENSAMXG00000035349-5144.749Astyanax_mexicanus
ENSXCOG00000017871zgc:1133436645.490ENSAMXG00000043291-7545.490Astyanax_mexicanus
ENSXCOG00000017871zgc:1133436342.857ENSCSEG00000015585-6842.857Cynoglossus_semilaevis
ENSXCOG00000017871zgc:1133436647.244ENSDARG00000101694znf11849447.244Danio_rerio
ENSXCOG00000017871zgc:1133437934.389ENSDARG00000008906si:ch211-241e1.59934.389Danio_rerio
ENSXCOG00000017871zgc:1133436644.951ENSDARG00000099731CABZ01066719.19544.951Danio_rerio
ENSXCOG00000017871zgc:1133436644.628ENSDARG00000094736znf11579644.628Danio_rerio
ENSXCOG00000017871zgc:1133436644.144ENSDARG00000113011zgc:1131029743.554Danio_rerio
ENSXCOG00000017871zgc:1133436647.449ENSDARG00000099618si:dkey-1b17.69147.449Danio_rerio
ENSXCOG00000017871zgc:1133436641.176ENSDARG00000099172BX000701.18840.856Danio_rerio
ENSXCOG00000017871zgc:1133436746.182ENSDARG00000098613si:dkey-15h8.168742.857Danio_rerio
ENSXCOG00000017871zgc:1133436644.251ENSDARG00000105074BX000701.29744.251Danio_rerio
ENSXCOG00000017871zgc:1133437645.238ENSDARG00000102401znf10019945.238Danio_rerio
ENSXCOG00000017871zgc:1133436642.991ENSDARG00000098248CABZ01081730.19242.991Danio_rerio
ENSXCOG00000017871zgc:1133436645.850ENSDARG00000100803zgc:1735179045.850Danio_rerio
ENSXCOG00000017871zgc:1133437345.850ENSDARG00000103777znf10019845.850Danio_rerio
ENSXCOG00000017871zgc:1133437648.905ENSDARG00000109703FO834825.18348.905Danio_rerio
ENSXCOG00000017871zgc:1133437245.238ENSDARG00000099890CU207221.29845.238Danio_rerio
ENSXCOG00000017871zgc:1133436444.841ENSDARG00000088507znf9829748.023Danio_rerio
ENSXCOG00000017871zgc:1133437645.238ENSDARG00000115857znf10019945.238Danio_rerio
ENSXCOG00000017871zgc:1133438044.408ENSDARG00000105056znf45l9644.079Danio_rerio
ENSXCOG00000017871zgc:1133436441.897ENSDARG00000104065znf11548741.897Danio_rerio
ENSXCOG00000017871zgc:1133436645.847ENSDARG00000097521si:dkey-111k8.58845.847Danio_rerio
ENSXCOG00000017871zgc:1133436339.640ENSEBUG00000015073-7439.640Eptatretus_burgeri
ENSXCOG00000017871zgc:1133436545.087ENSFHEG00000014023-6145.087Fundulus_heteroclitus
ENSXCOG00000017871zgc:1133436644.545ENSFHEG00000018209-7244.545Fundulus_heteroclitus
ENSXCOG00000017871zgc:1133437245.695ENSFHEG00000018009-5745.993Fundulus_heteroclitus
ENSXCOG00000017871zgc:1133437243.750ENSFHEG00000013152-6743.750Fundulus_heteroclitus
ENSXCOG00000017871zgc:1133437244.944ENSHBUG00000018916-6344.944Haplochromis_burtoni
ENSXCOG00000017871zgc:1133436641.379ENSHBUG00000009953-6341.379Haplochromis_burtoni
ENSXCOG00000017871zgc:1133437045.299ENSKMAG00000009563-7745.299Kryptolebias_marmoratus
ENSXCOG00000017871zgc:1133436348.718ENSLBEG00000022939-6339.850Labrus_bergylta
ENSXCOG00000017871zgc:1133436950.725ENSLBEG00000020461-5850.725Labrus_bergylta
ENSXCOG00000017871zgc:1133436343.860ENSLBEG00000028628znf11745043.860Labrus_bergylta
ENSXCOG00000017871zgc:1133436343.750ENSMAMG00000014743-5043.750Mastacembelus_armatus
ENSXCOG00000017871zgc:1133436444.944ENSMZEG00005007426-6544.944Maylandia_zebra
ENSXCOG00000017871zgc:1133436545.673ENSMZEG00005027943-9548.077Maylandia_zebra
ENSXCOG00000017871zgc:1133436437.872ENSMZEG00005022161-9043.396Maylandia_zebra
ENSXCOG00000017871zgc:1133436540.099ENSMZEG00005005162-7140.099Maylandia_zebra
ENSXCOG00000017871zgc:1133439643.972ENSMZEG00005026470-7943.972Maylandia_zebra
ENSXCOG00000017871zgc:1133436538.528ENSMZEG00005025568-8138.528Maylandia_zebra
ENSXCOG00000017871zgc:1133438545.614ENSMZEG00005027793-9645.614Maylandia_zebra
ENSXCOG00000017871zgc:1133437247.727ENSMZEG00005021426-8944.792Maylandia_zebra
ENSXCOG00000017871zgc:1133436643.169ENSMZEG00005025729-9143.169Maylandia_zebra
ENSXCOG00000017871zgc:1133436349.180ENSMALG00000018074-6049.180Monopterus_albus
ENSXCOG00000017871zgc:1133436640.449ENSMALG00000008638-6140.449Monopterus_albus
ENSXCOG00000017871zgc:1133437642.969ENSNBRG00000000577-9444.615Neolamprologus_brichardi
ENSXCOG00000017871zgc:1133436437.545ENSONIG00000003363-10036.879Oreochromis_niloticus
ENSXCOG00000017871zgc:1133436535.793ENSONIG00000006585-10035.315Oreochromis_niloticus
ENSXCOG00000017871zgc:1133436440.529ENSONIG00000013908-10040.529Oreochromis_niloticus
ENSXCOG00000017871zgc:1133439943.243ENSORLG00020019341-10042.982Oryzias_latipes_hni
ENSXCOG00000017871zgc:1133436240.244ENSPKIG00000018633-5840.244Paramormyrops_kingsleyae
ENSXCOG00000017871zgc:1133437645.455ENSPKIG00000019848-6245.455Paramormyrops_kingsleyae
ENSXCOG00000017871zgc:1133437843.363ENSPMGG00000001558znf11748143.363Periophthalmus_magnuspinnatus
ENSXCOG00000017871zgc:1133436440.833ENSPFOG00000011766-10040.833Poecilia_formosa
ENSXCOG00000017871zgc:1133436347.445ENSPFOG00000001144-10043.295Poecilia_formosa
ENSXCOG00000017871zgc:1133437246.053ENSPLAG00000016561zgc:1133489049.275Poecilia_latipinna
ENSXCOG00000017871zgc:11334310086.083ENSPMEG00000007573zgc:11334310086.083Poecilia_mexicana
ENSXCOG00000017871zgc:1133436342.727ENSPREG00000014105-7937.545Poecilia_reticulata
ENSXCOG00000017871zgc:11334310084.294ENSPREG00000001514zgc:11334310084.692Poecilia_reticulata
ENSXCOG00000017871zgc:1133436640.196ENSPREG00000005538-9240.196Poecilia_reticulata
ENSXCOG00000017871zgc:1133436440.000ENSPNYG00000024183zgc:1735779940.000Pundamilia_nyererei
ENSXCOG00000017871zgc:1133436649.351ENSSDUG00000008682-7747.368Seriola_dumerili
ENSXCOG00000017871zgc:1133437044.872ENSSPAG00000013109si:ch211-241b2.16945.064Stegastes_partitus
ENSXCOG00000017871zgc:1133436347.368ENSSPAG00000009426-6747.368Stegastes_partitus
ENSXCOG00000017871zgc:1133436641.921ENSSPAG00000006539-8941.921Stegastes_partitus
ENSXCOG00000017871zgc:1133436445.055ENSTNIG00000000277-9745.055Tetraodon_nigroviridis
ENSXCOG00000017871zgc:11334310090.381ENSXMAG00000019923zgc:11334310090.381Xiphophorus_maculatus

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