EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000017930 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2072 bases
Position: chrKQ557208.1:7420407-7422478
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024014	PseudoU_synth_2	PF00849.22	5.6e-24	1	1
ENSXCOP00000024015	PseudoU_synth_2	PF00849.22	7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024299	-	915	-	ENSXCOP00000024014	304 (aa)	-	-
ENSXCOT00000024300	-	402	-	ENSXCOP00000024015	133 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000017930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000017930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000017930	rpusd1	98	54.754	ENSG00000007376	RPUSD1	99	66.467	Homo_sapiens
ENSXCOG00000017930	rpusd1	100	79.739	ENSAPOG00000022221	rpusd1	99	80.583	Acanthochromis_polyacanthus
ENSXCOG00000017930	rpusd1	98	59.667	ENSAMEG00000007461	RPUSD1	98	59.667	Ailuropoda_melanoleuca
ENSXCOG00000017930	rpusd1	100	78.135	ENSACIG00000015863	rpusd1	100	78.387	Amphilophus_citrinellus
ENSXCOG00000017930	rpusd1	100	81.230	ENSAOCG00000021975	rpusd1	97	81.230	Amphiprion_ocellaris
ENSXCOG00000017930	rpusd1	100	81.553	ENSAPEG00000001316	rpusd1	97	81.553	Amphiprion_percula
ENSXCOG00000017930	rpusd1	100	78.964	ENSATEG00000002984	rpusd1	99	78.964	Anabas_testudineus
ENSXCOG00000017930	rpusd1	77	57.551	ENSAPLG00000012316	RPUSD1	98	57.551	Anas_platyrhynchos
ENSXCOG00000017930	rpusd1	98	62.542	ENSACAG00000008953	RPUSD1	99	62.542	Anolis_carolinensis
ENSXCOG00000017930	rpusd1	98	55.082	ENSANAG00000024709	RPUSD1	98	56.209	Aotus_nancymaae
ENSXCOG00000017930	rpusd1	100	78.135	ENSACLG00000013692	rpusd1	100	78.135	Astatotilapia_calliptera
ENSXCOG00000017930	rpusd1	99	69.435	ENSAMXG00000019802	rpusd1	99	69.435	Astyanax_mexicanus
ENSXCOG00000017930	rpusd1	98	58.804	ENSBTAG00000000179	RPUSD1	98	58.804	Bos_taurus
ENSXCOG00000017930	rpusd1	98	54.808	ENSCJAG00000012253	RPUSD1	98	55.882	Callithrix_jacchus
ENSXCOG00000017930	rpusd1	98	57.333	ENSCAFG00000019614	RPUSD1	98	58.667	Canis_familiaris
ENSXCOG00000017930	rpusd1	98	57.333	ENSCAFG00020008891	RPUSD1	98	58.667	Canis_lupus_dingo
ENSXCOG00000017930	rpusd1	98	59.468	ENSCHIG00000012872	RPUSD1	98	59.468	Capra_hircus
ENSXCOG00000017930	rpusd1	98	55.667	ENSTSYG00000036934	RPUSD1	98	55.667	Carlito_syrichta
ENSXCOG00000017930	rpusd1	98	56.667	ENSCAPG00000014219	RPUSD1	98	56.667	Cavia_aperea
ENSXCOG00000017930	rpusd1	98	56.667	ENSCPOG00000034604	RPUSD1	98	56.667	Cavia_porcellus
ENSXCOG00000017930	rpusd1	98	55.410	ENSCCAG00000034385	RPUSD1	98	56.536	Cebus_capucinus
ENSXCOG00000017930	rpusd1	98	54.232	ENSCATG00000042983	RPUSD1	98	56.209	Cercocebus_atys
ENSXCOG00000017930	rpusd1	98	55.667	ENSCLAG00000013966	RPUSD1	98	55.446	Chinchilla_lanigera
ENSXCOG00000017930	rpusd1	98	55.410	ENSCSAG00000012121	RPUSD1	98	56.209	Chlorocebus_sabaeus
ENSXCOG00000017930	rpusd1	98	60.927	ENSCPBG00000021101	RPUSD1	99	60.927	Chrysemys_picta_bellii
ENSXCOG00000017930	rpusd1	77	68.932	ENSCANG00000028576	RPUSD1	90	62.846	Colobus_angolensis_palliatus
ENSXCOG00000017930	rpusd1	98	58.140	ENSCGRG00001014253	Rpusd1	98	58.140	Cricetulus_griseus_chok1gshd
ENSXCOG00000017930	rpusd1	98	58.140	ENSCGRG00000017995	Rpusd1	98	58.140	Cricetulus_griseus_crigri
ENSXCOG00000017930	rpusd1	98	76.316	ENSCSEG00000018512	rpusd1	98	76.316	Cynoglossus_semilaevis
ENSXCOG00000017930	rpusd1	74	84.848	ENSCSEG00000007648	-	99	84.314	Cynoglossus_semilaevis
ENSXCOG00000017930	rpusd1	100	89.145	ENSCVAG00000022746	rpusd1	100	89.145	Cyprinodon_variegatus
ENSXCOG00000017930	rpusd1	98	70.234	ENSDARG00000060192	rpusd1	99	70.234	Danio_rerio
ENSXCOG00000017930	rpusd1	98	54.967	ENSDNOG00000003721	RPUSD1	98	54.967	Dasypus_novemcinctus
ENSXCOG00000017930	rpusd1	96	60.156	ENSDORG00000026656	Rpusd1	98	57.000	Dipodomys_ordii
ENSXCOG00000017930	rpusd1	96	47.403	ENSEBUG00000008767	rpusd1	92	47.403	Eptatretus_burgeri
ENSXCOG00000017930	rpusd1	98	55.987	ENSEASG00005018421	RPUSD1	74	56.311	Equus_asinus_asinus
ENSXCOG00000017930	rpusd1	100	68.471	ENSELUG00000014307	rpusd1	90	70.130	Esox_lucius
ENSXCOG00000017930	rpusd1	98	57.667	ENSFCAG00000010359	RPUSD1	98	57.667	Felis_catus
ENSXCOG00000017930	rpusd1	98	64.883	ENSFALG00000003211	RPUSD1	99	64.883	Ficedula_albicollis
ENSXCOG00000017930	rpusd1	98	56.667	ENSFDAG00000013398	RPUSD1	98	56.667	Fukomys_damarensis
ENSXCOG00000017930	rpusd1	100	87.622	ENSFHEG00000004736	rpusd1	100	90.228	Fundulus_heteroclitus
ENSXCOG00000017930	rpusd1	99	70.033	ENSGMOG00000010756	rpusd1	99	70.358	Gadus_morhua
ENSXCOG00000017930	rpusd1	98	64.026	ENSGALG00000005315	RPUSD1	99	64.026	Gallus_gallus
ENSXCOG00000017930	rpusd1	100	95.724	ENSGAFG00000009886	rpusd1	100	95.724	Gambusia_affinis
ENSXCOG00000017930	rpusd1	100	77.346	ENSGACG00000014276	rpusd1	100	77.346	Gasterosteus_aculeatus
ENSXCOG00000017930	rpusd1	98	60.927	ENSGAGG00000004181	RPUSD1	99	60.927	Gopherus_agassizii
ENSXCOG00000017930	rpusd1	98	55.556	ENSGGOG00000013997	RPUSD1	98	56.678	Gorilla_gorilla
ENSXCOG00000017930	rpusd1	100	78.457	ENSHBUG00000023728	rpusd1	100	78.457	Haplochromis_burtoni
ENSXCOG00000017930	rpusd1	98	56.000	ENSHGLG00000002595	RPUSD1	98	55.776	Heterocephalus_glaber_female
ENSXCOG00000017930	rpusd1	98	56.000	ENSHGLG00100014303	RPUSD1	98	55.776	Heterocephalus_glaber_male
ENSXCOG00000017930	rpusd1	74	87.879	ENSHCOG00000020005	-	96	87.255	Hippocampus_comes
ENSXCOG00000017930	rpusd1	99	73.000	ENSHCOG00000002390	rpusd1	99	73.000	Hippocampus_comes
ENSXCOG00000017930	rpusd1	98	67.114	ENSIPUG00000001570	rpusd1	99	66.890	Ictalurus_punctatus
ENSXCOG00000017930	rpusd1	98	56.667	ENSSTOG00000004276	RPUSD1	98	56.667	Ictidomys_tridecemlineatus
ENSXCOG00000017930	rpusd1	98	57.475	ENSJJAG00000015696	Rpusd1	98	57.475	Jaculus_jaculus
ENSXCOG00000017930	rpusd1	99	85.479	ENSKMAG00000017287	rpusd1	99	85.479	Kryptolebias_marmoratus
ENSXCOG00000017930	rpusd1	100	77.670	ENSLBEG00000022502	rpusd1	99	77.670	Labrus_bergylta
ENSXCOG00000017930	rpusd1	100	77.670	ENSLBEG00000013354	RPUSD1	99	77.670	Labrus_bergylta
ENSXCOG00000017930	rpusd1	98	62.171	ENSLACG00000008869	RPUSD1	99	62.171	Latimeria_chalumnae
ENSXCOG00000017930	rpusd1	74	81.818	ENSLOCG00000005682	rpusd1	99	81.776	Lepisosteus_oculatus
ENSXCOG00000017930	rpusd1	98	56.000	ENSLAFG00000002115	RPUSD1	98	56.000	Loxodonta_africana
ENSXCOG00000017930	rpusd1	98	55.410	ENSMFAG00000003961	RPUSD1	98	56.209	Macaca_fascicularis
ENSXCOG00000017930	rpusd1	98	55.410	ENSMMUG00000000842	RPUSD1	98	56.209	Macaca_mulatta
ENSXCOG00000017930	rpusd1	98	55.410	ENSMNEG00000042712	RPUSD1	98	56.209	Macaca_nemestrina
ENSXCOG00000017930	rpusd1	98	55.410	ENSMLEG00000030591	RPUSD1	98	56.209	Mandrillus_leucophaeus
ENSXCOG00000017930	rpusd1	100	81.613	ENSMAMG00000004735	rpusd1	99	81.613	Mastacembelus_armatus
ENSXCOG00000017930	rpusd1	100	78.135	ENSMZEG00005003214	rpusd1	100	78.135	Maylandia_zebra
ENSXCOG00000017930	rpusd1	96	64.646	ENSMGAG00000005447	RPUSD1	98	64.646	Meleagris_gallopavo
ENSXCOG00000017930	rpusd1	74	72.727	ENSMAUG00000019998	Rpusd1	96	56.522	Mesocricetus_auratus
ENSXCOG00000017930	rpusd1	98	55.333	ENSMICG00000017561	RPUSD1	98	55.333	Microcebus_murinus
ENSXCOG00000017930	rpusd1	98	58.667	ENSMOCG00000014082	Rpusd1	98	58.667	Microtus_ochrogaster
ENSXCOG00000017930	rpusd1	99	74.837	ENSMMOG00000012569	rpusd1	99	74.919	Mola_mola
ENSXCOG00000017930	rpusd1	99	61.716	ENSMODG00000016882	RPUSD1	99	61.716	Monodelphis_domestica
ENSXCOG00000017930	rpusd1	100	78.710	ENSMALG00000017818	rpusd1	99	78.846	Monopterus_albus
ENSXCOG00000017930	rpusd1	98	58.333	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.333	Mus_caroli
ENSXCOG00000017930	rpusd1	98	58.333	ENSMUSG00000041199	Rpusd1	98	58.333	Mus_musculus
ENSXCOG00000017930	rpusd1	98	57.377	MGP_PahariEiJ_G0023562	Rpusd1	98	58.033	Mus_pahari
ENSXCOG00000017930	rpusd1	98	58.333	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.333	Mus_spretus
ENSXCOG00000017930	rpusd1	98	56.000	ENSMPUG00000015897	RPUSD1	97	56.711	Mustela_putorius_furo
ENSXCOG00000017930	rpusd1	98	55.921	ENSMLUG00000001089	RPUSD1	98	57.049	Myotis_lucifugus
ENSXCOG00000017930	rpusd1	96	59.542	ENSNGAG00000003595	Rpusd1	98	57.333	Nannospalax_galili
ENSXCOG00000017930	rpusd1	100	79.605	ENSNBRG00000006457	rpusd1	100	79.605	Neolamprologus_brichardi
ENSXCOG00000017930	rpusd1	53	47.059	ENSNLEG00000008424	-	97	47.953	Nomascus_leucogenys
ENSXCOG00000017930	rpusd1	98	61.538	ENSMEUG00000016049	RPUSD1	98	61.538	Notamacropus_eugenii
ENSXCOG00000017930	rpusd1	98	50.000	ENSOPRG00000008340	RPUSD1	98	50.000	Ochotona_princeps
ENSXCOG00000017930	rpusd1	98	55.333	ENSODEG00000016945	RPUSD1	98	55.333	Octodon_degus
ENSXCOG00000017930	rpusd1	99	78.247	ENSONIG00000015672	rpusd1	100	78.247	Oreochromis_niloticus
ENSXCOG00000017930	rpusd1	74	72.449	ENSOANG00000030625	-	78	71.154	Ornithorhynchus_anatinus
ENSXCOG00000017930	rpusd1	100	77.049	ENSORLG00000013009	rpusd1	99	77.049	Oryzias_latipes
ENSXCOG00000017930	rpusd1	100	76.721	ENSORLG00020010382	rpusd1	99	76.721	Oryzias_latipes_hni
ENSXCOG00000017930	rpusd1	100	76.393	ENSORLG00015021354	rpusd1	99	76.393	Oryzias_latipes_hsok
ENSXCOG00000017930	rpusd1	100	77.961	ENSOMEG00000021426	rpusd1	99	77.961	Oryzias_melastigma
ENSXCOG00000017930	rpusd1	98	55.410	ENSOGAG00000003795	RPUSD1	98	55.410	Otolemur_garnettii
ENSXCOG00000017930	rpusd1	98	59.136	ENSOARG00000014254	RPUSD1	98	59.136	Ovis_aries
ENSXCOG00000017930	rpusd1	98	55.082	ENSPPAG00000034797	RPUSD1	98	56.209	Pan_paniscus
ENSXCOG00000017930	rpusd1	98	58.000	ENSPPRG00000012389	RPUSD1	98	58.000	Panthera_pardus
ENSXCOG00000017930	rpusd1	99	57.947	ENSPTIG00000008545	RPUSD1	90	63.866	Panthera_tigris_altaica
ENSXCOG00000017930	rpusd1	98	55.082	ENSPTRG00000007565	RPUSD1	98	56.209	Pan_troglodytes
ENSXCOG00000017930	rpusd1	98	55.410	ENSPANG00000024401	RPUSD1	98	56.209	Papio_anubis
ENSXCOG00000017930	rpusd1	100	69.079	ENSPKIG00000018890	rpusd1	91	69.079	Paramormyrops_kingsleyae
ENSXCOG00000017930	rpusd1	98	63.245	ENSPSIG00000013945	RPUSD1	99	63.245	Pelodiscus_sinensis
ENSXCOG00000017930	rpusd1	100	73.684	ENSPMGG00000014950	rpusd1	99	74.351	Periophthalmus_magnuspinnatus
ENSXCOG00000017930	rpusd1	98	57.667	ENSPEMG00000000497	Rpusd1	98	57.667	Peromyscus_maniculatus_bairdii
ENSXCOG00000017930	rpusd1	99	54.605	ENSPMAG00000001563	rpusd1	99	54.397	Petromyzon_marinus
ENSXCOG00000017930	rpusd1	98	62.987	ENSPCIG00000021216	-	92	62.987	Phascolarctos_cinereus
ENSXCOG00000017930	rpusd1	100	94.408	ENSPFOG00000007946	rpusd1	100	94.408	Poecilia_formosa
ENSXCOG00000017930	rpusd1	100	94.408	ENSPLAG00000011925	rpusd1	100	94.408	Poecilia_latipinna
ENSXCOG00000017930	rpusd1	100	94.408	ENSPMEG00000002910	rpusd1	100	94.408	Poecilia_mexicana
ENSXCOG00000017930	rpusd1	100	95.395	ENSPREG00000019851	rpusd1	100	95.395	Poecilia_reticulata
ENSXCOG00000017930	rpusd1	98	43.333	ENSPCAG00000002258	RPUSD1	98	43.333	Procavia_capensis
ENSXCOG00000017930	rpusd1	98	54.754	ENSPCOG00000022582	RPUSD1	98	54.545	Propithecus_coquereli
ENSXCOG00000017930	rpusd1	96	60.156	ENSPVAG00000013104	RPUSD1	98	52.941	Pteropus_vampyrus
ENSXCOG00000017930	rpusd1	100	78.457	ENSPNYG00000024076	rpusd1	100	78.457	Pundamilia_nyererei
ENSXCOG00000017930	rpusd1	99	67.774	ENSPNAG00000013806	rpusd1	99	67.774	Pygocentrus_nattereri
ENSXCOG00000017930	rpusd1	98	58.333	ENSRNOG00000023639	Rpusd1	98	58.746	Rattus_norvegicus
ENSXCOG00000017930	rpusd1	98	55.738	ENSRBIG00000030238	RPUSD1	98	56.863	Rhinopithecus_bieti
ENSXCOG00000017930	rpusd1	98	55.738	ENSRROG00000036663	RPUSD1	98	56.863	Rhinopithecus_roxellana
ENSXCOG00000017930	rpusd1	98	57.667	ENSSBOG00000033063	RPUSD1	98	57.333	Saimiri_boliviensis_boliviensis
ENSXCOG00000017930	rpusd1	98	62.207	ENSSHAG00000013500	RPUSD1	98	62.207	Sarcophilus_harrisii
ENSXCOG00000017930	rpusd1	98	71.572	ENSSFOG00015014394	rpusd1	99	71.572	Scleropages_formosus
ENSXCOG00000017930	rpusd1	100	81.877	ENSSMAG00000008045	rpusd1	93	81.877	Scophthalmus_maximus
ENSXCOG00000017930	rpusd1	100	81.877	ENSSDUG00000001829	rpusd1	97	81.877	Seriola_dumerili
ENSXCOG00000017930	rpusd1	100	81.877	ENSSLDG00000020853	rpusd1	97	81.877	Seriola_lalandi_dorsalis
ENSXCOG00000017930	rpusd1	54	72.289	ENSSARG00000011187	-	99	72.289	Sorex_araneus
ENSXCOG00000017930	rpusd1	62	60.847	ENSSPUG00000005119	-	98	60.847	Sphenodon_punctatus
ENSXCOG00000017930	rpusd1	100	83.819	ENSSPAG00000012708	rpusd1	99	83.819	Stegastes_partitus
ENSXCOG00000017930	rpusd1	98	56.721	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSXCOG00000017930	rpusd1	81	71.837	ENSTGUG00000015375	RPUSD1	97	71.837	Taeniopygia_guttata
ENSXCOG00000017930	rpusd1	100	74.516	ENSTRUG00000003041	rpusd1	99	75.405	Takifugu_rubripes
ENSXCOG00000017930	rpusd1	99	71.429	ENSTNIG00000002660	rpusd1	99	71.429	Tetraodon_nigroviridis
ENSXCOG00000017930	rpusd1	98	57.377	ENSTTRG00000010167	RPUSD1	98	58.170	Tursiops_truncatus
ENSXCOG00000017930	rpusd1	98	58.333	ENSUAMG00000012736	RPUSD1	98	58.333	Ursus_americanus
ENSXCOG00000017930	rpusd1	98	58.667	ENSUMAG00000021174	RPUSD1	94	63.320	Ursus_maritimus
ENSXCOG00000017930	rpusd1	98	59.000	ENSVVUG00000012357	RPUSD1	98	59.000	Vulpes_vulpes
ENSXCOG00000017930	rpusd1	98	62.542	ENSXETG00000007184	rpusd1	98	62.542	Xenopus_tropicalis
ENSXCOG00000017930	rpusd1	100	98.355	ENSXMAG00000024084	rpusd1	100	98.355	Xiphophorus_maculatus