EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018047 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5140 bases
Position: chrKQ557208.1:8937681-8942820
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024168	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024457	-	819	-	ENSXCOP00000024168	272 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018047	alyref	98	52.574	ENSAPOG00000000183	-	98	48.084	Acanthochromis_polyacanthus
ENSXCOG00000018047	alyref	98	78.755	ENSACIG00000006351	alyref	99	77.419	Amphilophus_citrinellus
ENSXCOG00000018047	alyref	99	46.488	ENSACIG00000020351	-	100	49.658	Amphilophus_citrinellus
ENSXCOG00000018047	alyref	99	77.899	ENSAOCG00000014012	alyref	99	83.883	Amphiprion_ocellaris
ENSXCOG00000018047	alyref	98	52.416	ENSAOCG00000019305	-	98	52.809	Amphiprion_ocellaris
ENSXCOG00000018047	alyref	98	79.121	ENSAPEG00000014603	alyref	99	83.883	Amphiprion_percula
ENSXCOG00000018047	alyref	98	53.532	ENSAPEG00000013527	-	98	52.809	Amphiprion_percula
ENSXCOG00000018047	alyref	97	55.357	ENSATEG00000000382	-	97	56.089	Anabas_testudineus
ENSXCOG00000018047	alyref	99	75.000	ENSATEG00000004307	alyref	99	78.339	Anabas_testudineus
ENSXCOG00000018047	alyref	98	52.500	ENSACLG00000010184	-	98	52.650	Astatotilapia_calliptera
ENSXCOG00000018047	alyref	99	74.368	ENSACLG00000008432	alyref	99	82.847	Astatotilapia_calliptera
ENSXCOG00000018047	alyref	99	69.892	ENSAMXG00000007359	alyref	99	74.007	Astyanax_mexicanus
ENSXCOG00000018047	alyref	72	52.792	ENSCING00000013568	-	98	44.245	Ciona_intestinalis
ENSXCOG00000018047	alyref	98	48.148	ENSCSAVG00000003324	-	98	46.067	Ciona_savignyi
ENSXCOG00000018047	alyref	99	75.812	ENSCSEG00000017800	alyref	99	80.657	Cynoglossus_semilaevis
ENSXCOG00000018047	alyref	99	80.586	ENSCVAG00000014869	alyref	99	84.444	Cyprinodon_variegatus
ENSXCOG00000018047	alyref	98	47.940	ENSCVAG00000007789	-	98	45.756	Cyprinodon_variegatus
ENSXCOG00000018047	alyref	99	76.071	ENSDARG00000077732	alyref	99	75.090	Danio_rerio
ENSXCOG00000018047	alyref	96	44.681	FBgn0010774	Ref1	65	49.724	Drosophila_melanogaster
ENSXCOG00000018047	alyref	98	53.558	ENSEBUG00000008253	alyref	95	51.661	Eptatretus_burgeri
ENSXCOG00000018047	alyref	69	45.596	ENSEBUG00000006305	alyref	99	38.768	Eptatretus_burgeri
ENSXCOG00000018047	alyref	99	76.557	ENSELUG00000017178	alyref	100	71.062	Esox_lucius
ENSXCOG00000018047	alyref	99	64.311	ENSELUG00000008849	-	100	63.604	Esox_lucius
ENSXCOG00000018047	alyref	57	75.776	ENSFALG00000011923	-	96	75.974	Ficedula_albicollis
ENSXCOG00000018047	alyref	99	82.222	ENSFHEG00000019426	alyref	99	80.150	Fundulus_heteroclitus
ENSXCOG00000018047	alyref	98	47.566	ENSFHEG00000004698	-	98	47.584	Fundulus_heteroclitus
ENSXCOG00000018047	alyref	67	55.224	ENSGMOG00000013122	-	100	57.360	Gadus_morhua
ENSXCOG00000018047	alyref	99	68.978	ENSGMOG00000009882	alyref	99	66.421	Gadus_morhua
ENSXCOG00000018047	alyref	97	49.813	ENSGAFG00000007573	-	97	46.816	Gambusia_affinis
ENSXCOG00000018047	alyref	99	97.770	ENSGAFG00000006014	alyref	100	97.770	Gambusia_affinis
ENSXCOG00000018047	alyref	98	54.610	ENSHBUG00000001454	-	98	52.797	Haplochromis_burtoni
ENSXCOG00000018047	alyref	99	74.368	ENSHBUG00000020196	alyref	99	82.847	Haplochromis_burtoni
ENSXCOG00000018047	alyref	99	46.528	ENSHCOG00000012825	-	96	47.122	Hippocampus_comes
ENSXCOG00000018047	alyref	99	72.464	ENSIPUG00000009469	alyref	99	73.993	Ictalurus_punctatus
ENSXCOG00000018047	alyref	72	64.796	ENSSTOG00000016570	-	91	65.574	Ictidomys_tridecemlineatus
ENSXCOG00000018047	alyref	98	52.045	ENSKMAG00000006462	-	97	51.880	Kryptolebias_marmoratus
ENSXCOG00000018047	alyref	99	76.449	ENSKMAG00000008912	alyref	99	79.121	Kryptolebias_marmoratus
ENSXCOG00000018047	alyref	98	45.230	ENSLBEG00000012930	-	99	49.104	Labrus_bergylta
ENSXCOG00000018047	alyref	99	82.545	ENSLBEG00000023118	alyref	90	85.455	Labrus_bergylta
ENSXCOG00000018047	alyref	99	46.233	ENSLBEG00000005387	-	99	47.423	Labrus_bergylta
ENSXCOG00000018047	alyref	75	68.056	ENSLOCG00000013879	alyref	88	66.981	Lepisosteus_oculatus
ENSXCOG00000018047	alyref	99	77.617	ENSMAMG00000003034	alyref	99	79.927	Mastacembelus_armatus
ENSXCOG00000018047	alyref	98	49.123	ENSMAMG00000005464	-	98	49.815	Mastacembelus_armatus
ENSXCOG00000018047	alyref	99	74.368	ENSMZEG00005008639	alyref	99	82.847	Maylandia_zebra
ENSXCOG00000018047	alyref	98	52.143	ENSMZEG00005012096	-	98	52.297	Maylandia_zebra
ENSXCOG00000018047	alyref	98	45.683	ENSMMOG00000007032	-	98	45.745	Mola_mola
ENSXCOG00000018047	alyref	99	84.727	ENSMMOG00000012458	alyref	98	83.636	Mola_mola
ENSXCOG00000018047	alyref	98	50.690	ENSMALG00000006054	-	98	48.443	Monopterus_albus
ENSXCOG00000018047	alyref	97	54.610	ENSMLUG00000014372	-	98	55.678	Myotis_lucifugus
ENSXCOG00000018047	alyref	99	55.197	ENSMLUG00000004098	-	98	54.380	Myotis_lucifugus
ENSXCOG00000018047	alyref	97	56.777	ENSMLUG00000022178	-	98	55.019	Myotis_lucifugus
ENSXCOG00000018047	alyref	99	53.737	ENSMLUG00000006521	-	98	54.745	Myotis_lucifugus
ENSXCOG00000018047	alyref	97	53.047	ENSMLUG00000009247	-	98	50.182	Myotis_lucifugus
ENSXCOG00000018047	alyref	97	55.000	ENSMLUG00000022467	-	98	51.613	Myotis_lucifugus
ENSXCOG00000018047	alyref	97	54.874	ENSMLUG00000028605	-	98	53.357	Myotis_lucifugus
ENSXCOG00000018047	alyref	97	56.727	ENSMLUG00000030671	-	98	52.857	Myotis_lucifugus
ENSXCOG00000018047	alyref	99	64.207	ENSNGAG00000022014	-	99	62.687	Nannospalax_galili
ENSXCOG00000018047	alyref	99	52.482	ENSNBRG00000017460	-	99	53.191	Neolamprologus_brichardi
ENSXCOG00000018047	alyref	99	74.729	ENSNBRG00000001747	alyref	99	82.482	Neolamprologus_brichardi
ENSXCOG00000018047	alyref	98	56.204	ENSONIG00000003296	-	98	55.197	Oreochromis_niloticus
ENSXCOG00000018047	alyref	99	76.786	ENSONIG00000019434	alyref	99	81.588	Oreochromis_niloticus
ENSXCOG00000018047	alyref	100	39.752	ENSORLG00000001620	-	60	46.460	Oryzias_latipes
ENSXCOG00000018047	alyref	99	80.882	ENSORLG00020011942	alyref	99	84.758	Oryzias_latipes_hni
ENSXCOG00000018047	alyref	99	47.653	ENSORLG00020015673	-	98	47.122	Oryzias_latipes_hni
ENSXCOG00000018047	alyref	99	83.456	ENSORLG00015022664	alyref	99	84.387	Oryzias_latipes_hsok
ENSXCOG00000018047	alyref	99	47.500	ENSORLG00015015143	-	98	48.201	Oryzias_latipes_hsok
ENSXCOG00000018047	alyref	98	51.866	ENSOMEG00000007158	-	98	48.148	Oryzias_melastigma
ENSXCOG00000018047	alyref	99	81.181	ENSOMEG00000019176	alyref	99	86.940	Oryzias_melastigma
ENSXCOG00000018047	alyref	67	76.216	ENSPPAG00000036403	-	68	74.054	Pan_paniscus
ENSXCOG00000018047	alyref	99	73.260	ENSPKIG00000007070	alyref	99	68.727	Paramormyrops_kingsleyae
ENSXCOG00000018047	alyref	99	73.993	ENSPKIG00000006233	-	81	67.518	Paramormyrops_kingsleyae
ENSXCOG00000018047	alyref	98	73.432	ENSPMGG00000016600	alyref	92	75.090	Periophthalmus_magnuspinnatus
ENSXCOG00000018047	alyref	73	47.739	ENSPMGG00000012994	-	70	57.258	Periophthalmus_magnuspinnatus
ENSXCOG00000018047	alyref	99	60.595	ENSPEMG00000016628	-	99	60.223	Peromyscus_maniculatus_bairdii
ENSXCOG00000018047	alyref	99	95.941	ENSPFOG00000022825	alyref	99	95.941	Poecilia_formosa
ENSXCOG00000018047	alyref	98	47.794	ENSPFOG00000017094	-	98	46.642	Poecilia_formosa
ENSXCOG00000018047	alyref	98	47.794	ENSPLAG00000014380	-	98	46.642	Poecilia_latipinna
ENSXCOG00000018047	alyref	99	96.296	ENSPLAG00000006948	alyref	100	96.296	Poecilia_latipinna
ENSXCOG00000018047	alyref	98	47.794	ENSPMEG00000023039	-	98	46.642	Poecilia_mexicana
ENSXCOG00000018047	alyref	99	96.703	ENSPMEG00000003547	alyref	100	95.941	Poecilia_mexicana
ENSXCOG00000018047	alyref	99	48.529	ENSPREG00000003649	-	99	47.388	Poecilia_reticulata
ENSXCOG00000018047	alyref	99	96.667	ENSPREG00000015795	alyref	100	96.667	Poecilia_reticulata
ENSXCOG00000018047	alyref	98	51.264	ENSPNYG00000002879	-	98	51.601	Pundamilia_nyererei
ENSXCOG00000018047	alyref	99	74.368	ENSPNYG00000017498	alyref	99	82.847	Pundamilia_nyererei
ENSXCOG00000018047	alyref	99	72.924	ENSPNAG00000002531	alyref	99	71.168	Pygocentrus_nattereri
ENSXCOG00000018047	alyref	71	71.795	ENSSBOG00000030924	-	85	71.204	Saimiri_boliviensis_boliviensis
ENSXCOG00000018047	alyref	98	54.945	ENSSHAG00000000609	-	99	51.449	Sarcophilus_harrisii
ENSXCOG00000018047	alyref	98	53.846	ENSSHAG00000012866	-	77	58.824	Sarcophilus_harrisii
ENSXCOG00000018047	alyref	75	77.295	ENSSFOG00015003923	alyref	72	77.561	Scleropages_formosus
ENSXCOG00000018047	alyref	67	76.087	ENSSFOG00015003678	alyref	83	73.370	Scleropages_formosus
ENSXCOG00000018047	alyref	98	75.735	ENSSMAG00000009283	alyref	99	79.779	Scophthalmus_maximus
ENSXCOG00000018047	alyref	97	50.179	ENSSMAG00000011169	-	100	54.680	Scophthalmus_maximus
ENSXCOG00000018047	alyref	99	77.536	ENSSDUG00000016158	alyref	99	82.784	Seriola_dumerili
ENSXCOG00000018047	alyref	99	77.256	ENSSLDG00000017803	alyref	99	82.482	Seriola_lalandi_dorsalis
ENSXCOG00000018047	alyref	99	53.069	ENSSPAG00000017028	-	98	52.708	Stegastes_partitus
ENSXCOG00000018047	alyref	99	48.084	ENSTRUG00000003051	-	99	46.643	Takifugu_rubripes
ENSXCOG00000018047	alyref	99	49.451	ENSTNIG00000014136	-	99	45.185	Tetraodon_nigroviridis
ENSXCOG00000018047	alyref	99	73.741	ENSTNIG00000011595	alyref	99	73.091	Tetraodon_nigroviridis
ENSXCOG00000018047	alyref	68	74.074	ENSVVUG00000000272	-	81	73.514	Vulpes_vulpes
ENSXCOG00000018047	alyref	98	47.955	ENSXMAG00000018086	-	99	47.388	Xiphophorus_maculatus
ENSXCOG00000018047	alyref	100	99.632	ENSXMAG00000012218	alyref	100	99.632	Xiphophorus_maculatus