EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018078 (Gene tree)
Gene ID: -
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3431 bases
Position: chrKQ557222.1:3041555-3044985
Accession: ZDB-GENE-030131-2466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024206	DBR1	PF05011.13	5.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024497	-	1623	-	ENSXCOP00000024206	540 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018078	dbr1	98	55.801	ENSG00000138231	DBR1	94	80.180	Homo_sapiens
ENSXCOG00000018078	dbr1	100	79.640	ENSAPOG00000004318	dbr1	100	79.640	Acanthochromis_polyacanthus
ENSXCOG00000018078	dbr1	98	56.111	ENSAMEG00000006272	DBR1	99	55.759	Ailuropoda_melanoleuca
ENSXCOG00000018078	dbr1	100	77.544	ENSACIG00000020512	dbr1	100	77.778	Amphilophus_citrinellus
ENSXCOG00000018078	dbr1	100	79.496	ENSAOCG00000008060	dbr1	100	79.496	Amphiprion_ocellaris
ENSXCOG00000018078	dbr1	100	79.676	ENSAPEG00000021944	dbr1	100	79.676	Amphiprion_percula
ENSXCOG00000018078	dbr1	99	76.964	ENSATEG00000019673	dbr1	99	79.354	Anabas_testudineus
ENSXCOG00000018078	dbr1	99	57.117	ENSACAG00000016760	DBR1	100	56.937	Anolis_carolinensis
ENSXCOG00000018078	dbr1	98	57.037	ENSANAG00000028952	DBR1	99	56.545	Aotus_nancymaae
ENSXCOG00000018078	dbr1	100	78.674	ENSACLG00000024027	dbr1	100	78.674	Astatotilapia_calliptera
ENSXCOG00000018078	dbr1	99	68.182	ENSAMXG00000030736	dbr1	99	68.357	Astyanax_mexicanus
ENSXCOG00000018078	dbr1	99	55.455	ENSBTAG00000019949	DBR1	99	55.091	Bos_taurus
ENSXCOG00000018078	dbr1	70	46.056	WBGene00000937	dbr-1	78	46.056	Caenorhabditis_elegans
ENSXCOG00000018078	dbr1	98	56.691	ENSCJAG00000002433	DBR1	99	56.000	Callithrix_jacchus
ENSXCOG00000018078	dbr1	98	55.720	ENSCAFG00000007501	DBR1	99	55.373	Canis_familiaris
ENSXCOG00000018078	dbr1	98	55.720	ENSCAFG00020008060	DBR1	99	55.373	Canis_lupus_dingo
ENSXCOG00000018078	dbr1	99	55.273	ENSCHIG00000026937	DBR1	99	54.909	Capra_hircus
ENSXCOG00000018078	dbr1	100	55.818	ENSTSYG00000005317	DBR1	99	55.273	Carlito_syrichta
ENSXCOG00000018078	dbr1	98	54.428	ENSCPOG00000006179	DBR1	99	53.514	Cavia_porcellus
ENSXCOG00000018078	dbr1	98	55.985	ENSCCAG00000025708	DBR1	99	55.818	Cebus_capucinus
ENSXCOG00000018078	dbr1	79	63.657	ENSCATG00000032054	DBR1	99	56.000	Cercocebus_atys
ENSXCOG00000018078	dbr1	98	54.815	ENSCLAG00000001800	DBR1	99	55.009	Chinchilla_lanigera
ENSXCOG00000018078	dbr1	79	63.426	ENSCSAG00000010977	DBR1	99	55.636	Chlorocebus_sabaeus
ENSXCOG00000018078	dbr1	89	66.667	ENSCHOG00000000730	DBR1	89	66.667	Choloepus_hoffmanni
ENSXCOG00000018078	dbr1	99	58.118	ENSCPBG00000007633	DBR1	90	58.118	Chrysemys_picta_bellii
ENSXCOG00000018078	dbr1	81	54.810	ENSCING00000011388	-	87	59.635	Ciona_intestinalis
ENSXCOG00000018078	dbr1	70	57.937	ENSCSAVG00000007545	-	100	57.937	Ciona_savignyi
ENSXCOG00000018078	dbr1	99	56.307	ENSCANG00000024237	DBR1	99	56.354	Colobus_angolensis_palliatus
ENSXCOG00000018078	dbr1	99	57.350	ENSCGRG00001018497	Dbr1	100	57.350	Cricetulus_griseus_chok1gshd
ENSXCOG00000018078	dbr1	99	52.555	ENSCGRG00000005958	Dbr1	99	52.555	Cricetulus_griseus_crigri
ENSXCOG00000018078	dbr1	99	73.835	ENSCSEG00000002813	dbr1	99	74.552	Cynoglossus_semilaevis
ENSXCOG00000018078	dbr1	99	81.884	ENSCVAG00000019969	dbr1	99	84.058	Cyprinodon_variegatus
ENSXCOG00000018078	dbr1	99	66.025	ENSDARG00000056923	dbr1	99	67.426	Danio_rerio
ENSXCOG00000018078	dbr1	98	57.459	ENSDNOG00000043630	DBR1	99	56.909	Dasypus_novemcinctus
ENSXCOG00000018078	dbr1	76	50.000	FBgn0035838	ldbr	79	52.358	Drosophila_melanogaster
ENSXCOG00000018078	dbr1	59	82.090	ENSETEG00000011830	DBR1	79	82.090	Echinops_telfairi
ENSXCOG00000018078	dbr1	79	53.828	ENSEBUG00000007494	dbr1	75	54.801	Eptatretus_burgeri
ENSXCOG00000018078	dbr1	98	55.985	ENSEASG00005003788	DBR1	99	55.636	Equus_asinus_asinus
ENSXCOG00000018078	dbr1	98	56.169	ENSECAG00000013920	DBR1	99	55.818	Equus_caballus
ENSXCOG00000018078	dbr1	99	46.084	ENSEEUG00000007059	DBR1	99	46.084	Erinaceus_europaeus
ENSXCOG00000018078	dbr1	99	69.643	ENSELUG00000005587	dbr1	99	71.886	Esox_lucius
ENSXCOG00000018078	dbr1	98	56.354	ENSFCAG00000002229	DBR1	99	56.000	Felis_catus
ENSXCOG00000018078	dbr1	99	56.261	ENSFALG00000013467	DBR1	86	56.624	Ficedula_albicollis
ENSXCOG00000018078	dbr1	98	55.351	ENSFDAG00000009524	DBR1	99	55.373	Fukomys_damarensis
ENSXCOG00000018078	dbr1	100	84.767	ENSFHEG00000001743	dbr1	100	83.513	Fundulus_heteroclitus
ENSXCOG00000018078	dbr1	99	70.662	ENSGMOG00000006925	dbr1	99	69.767	Gadus_morhua
ENSXCOG00000018078	dbr1	99	50.457	ENSGALG00000043797	DBR1	100	50.365	Gallus_gallus
ENSXCOG00000018078	dbr1	100	96.481	ENSGAFG00000001046	dbr1	100	96.481	Gambusia_affinis
ENSXCOG00000018078	dbr1	99	76.311	ENSGACG00000009122	dbr1	99	76.130	Gasterosteus_aculeatus
ENSXCOG00000018078	dbr1	99	57.856	ENSGAGG00000001244	DBR1	100	57.856	Gopherus_agassizii
ENSXCOG00000018078	dbr1	79	58.102	ENSGGOG00000004564	DBR1	99	51.455	Gorilla_gorilla
ENSXCOG00000018078	dbr1	100	78.853	ENSHBUG00000000882	dbr1	100	78.853	Haplochromis_burtoni
ENSXCOG00000018078	dbr1	98	56.000	ENSHGLG00000014529	Dbr1	99	55.655	Heterocephalus_glaber_female
ENSXCOG00000018078	dbr1	98	56.000	ENSHGLG00100013202	Dbr1	99	55.655	Heterocephalus_glaber_male
ENSXCOG00000018078	dbr1	99	74.771	ENSHCOG00000004179	dbr1	99	74.771	Hippocampus_comes
ENSXCOG00000018078	dbr1	99	65.858	ENSIPUG00000023749	dbr1	99	66.031	Ictalurus_punctatus
ENSXCOG00000018078	dbr1	99	56.137	ENSSTOG00000007122	DBR1	99	55.814	Ictidomys_tridecemlineatus
ENSXCOG00000018078	dbr1	99	55.978	ENSJJAG00000017080	Dbr1	100	55.435	Jaculus_jaculus
ENSXCOG00000018078	dbr1	99	79.529	ENSKMAG00000004869	dbr1	99	79.891	Kryptolebias_marmoratus
ENSXCOG00000018078	dbr1	99	75.265	ENSLBEG00000021307	dbr1	99	77.837	Labrus_bergylta
ENSXCOG00000018078	dbr1	99	60.545	ENSLACG00000005547	DBR1	99	60.545	Latimeria_chalumnae
ENSXCOG00000018078	dbr1	100	65.653	ENSLOCG00000004160	dbr1	100	64.937	Lepisosteus_oculatus
ENSXCOG00000018078	dbr1	99	56.250	ENSLAFG00000005827	DBR1	99	56.066	Loxodonta_africana
ENSXCOG00000018078	dbr1	79	63.657	ENSMFAG00000043642	DBR1	99	56.000	Macaca_fascicularis
ENSXCOG00000018078	dbr1	79	63.657	ENSMMUG00000021284	DBR1	99	56.000	Macaca_mulatta
ENSXCOG00000018078	dbr1	79	63.657	ENSMNEG00000041740	DBR1	99	56.000	Macaca_nemestrina
ENSXCOG00000018078	dbr1	69	51.475	ENSMLEG00000034542	DBR1	95	45.825	Mandrillus_leucophaeus
ENSXCOG00000018078	dbr1	99	77.798	ENSMAMG00000012205	dbr1	99	78.153	Mastacembelus_armatus
ENSXCOG00000018078	dbr1	100	78.674	ENSMZEG00005021338	dbr1	100	78.674	Maylandia_zebra
ENSXCOG00000018078	dbr1	80	51.364	ENSMGAG00000002142	DBR1	99	51.481	Meleagris_gallopavo
ENSXCOG00000018078	dbr1	99	57.790	ENSMAUG00000010037	Dbr1	100	57.971	Mesocricetus_auratus
ENSXCOG00000018078	dbr1	98	56.458	ENSMICG00000049533	DBR1	99	56.466	Microcebus_murinus
ENSXCOG00000018078	dbr1	99	56.772	ENSMOCG00000018746	Dbr1	99	56.586	Microtus_ochrogaster
ENSXCOG00000018078	dbr1	99	75.579	ENSMMOG00000000719	dbr1	99	74.332	Mola_mola
ENSXCOG00000018078	dbr1	99	56.239	ENSMODG00000018554	DBR1	100	55.877	Monodelphis_domestica
ENSXCOG00000018078	dbr1	99	75.398	ENSMALG00000022283	dbr1	97	76.106	Monopterus_albus
ENSXCOG00000018078	dbr1	98	58.303	MGP_CAROLIEiJ_G0032564	Dbr1	98	67.901	Mus_caroli
ENSXCOG00000018078	dbr1	99	57.636	ENSMUSG00000032469	Dbr1	98	67.901	Mus_musculus
ENSXCOG00000018078	dbr1	99	56.490	MGP_PahariEiJ_G0015433	Dbr1	98	67.901	Mus_pahari
ENSXCOG00000018078	dbr1	99	56.987	MGP_SPRETEiJ_G0033708	Dbr1	98	67.901	Mus_spretus
ENSXCOG00000018078	dbr1	98	56.538	ENSMPUG00000009230	DBR1	99	56.182	Mustela_putorius_furo
ENSXCOG00000018078	dbr1	98	56.377	ENSMLUG00000026117	DBR1	99	56.466	Myotis_lucifugus
ENSXCOG00000018078	dbr1	99	55.576	ENSNGAG00000003518	Dbr1	99	55.396	Nannospalax_galili
ENSXCOG00000018078	dbr1	100	77.957	ENSNBRG00000016318	dbr1	100	77.957	Neolamprologus_brichardi
ENSXCOG00000018078	dbr1	99	55.678	ENSNLEG00000032263	DBR1	97	55.455	Nomascus_leucogenys
ENSXCOG00000018078	dbr1	99	56.364	ENSMEUG00000009188	DBR1	99	56.000	Notamacropus_eugenii
ENSXCOG00000018078	dbr1	93	51.272	ENSOPRG00000016510	DBR1	99	50.881	Ochotona_princeps
ENSXCOG00000018078	dbr1	99	55.172	ENSODEG00000018178	DBR1	99	54.991	Octodon_degus
ENSXCOG00000018078	dbr1	100	76.512	ENSONIG00000013801	dbr1	100	77.818	Oreochromis_niloticus
ENSXCOG00000018078	dbr1	88	54.618	ENSOANG00000007783	DBR1	100	55.711	Ornithorhynchus_anatinus
ENSXCOG00000018078	dbr1	74	63.184	ENSOCUG00000015129	DBR1	89	54.080	Oryctolagus_cuniculus
ENSXCOG00000018078	dbr1	100	75.137	ENSORLG00015001112	dbr1	99	75.231	Oryzias_latipes_hsok
ENSXCOG00000018078	dbr1	100	75.322	ENSOMEG00000000857	dbr1	99	74.954	Oryzias_melastigma
ENSXCOG00000018078	dbr1	98	55.474	ENSOGAG00000033095	DBR1	99	55.197	Otolemur_garnettii
ENSXCOG00000018078	dbr1	99	54.182	ENSOARG00000007589	DBR1	99	53.818	Ovis_aries
ENSXCOG00000018078	dbr1	79	63.426	ENSPPAG00000031137	DBR1	99	55.636	Pan_paniscus
ENSXCOG00000018078	dbr1	98	56.354	ENSPPRG00000013629	DBR1	99	56.000	Panthera_pardus
ENSXCOG00000018078	dbr1	96	55.744	ENSPTIG00000012674	DBR1	98	55.288	Panthera_tigris_altaica
ENSXCOG00000018078	dbr1	79	63.657	ENSPTRG00000015441	DBR1	99	55.818	Pan_troglodytes
ENSXCOG00000018078	dbr1	79	63.657	ENSPANG00000012664	DBR1	99	56.000	Papio_anubis
ENSXCOG00000018078	dbr1	99	66.491	ENSPKIG00000000310	dbr1	99	66.842	Paramormyrops_kingsleyae
ENSXCOG00000018078	dbr1	88	56.994	ENSPSIG00000015486	DBR1	100	56.576	Pelodiscus_sinensis
ENSXCOG00000018078	dbr1	98	56.642	ENSPEMG00000020602	Dbr1	98	56.831	Peromyscus_maniculatus_bairdii
ENSXCOG00000018078	dbr1	70	59.259	ENSPMAG00000008620	dbr1	99	59.259	Petromyzon_marinus
ENSXCOG00000018078	dbr1	99	56.420	ENSPCIG00000006494	DBR1	100	56.058	Phascolarctos_cinereus
ENSXCOG00000018078	dbr1	100	95.926	ENSPLAG00000011665	dbr1	100	95.926	Poecilia_latipinna
ENSXCOG00000018078	dbr1	69	93.867	ENSPLAG00000002421	-	100	92.800	Poecilia_latipinna
ENSXCOG00000018078	dbr1	70	93.899	ENSPMEG00000020884	-	94	91.821	Poecilia_mexicana
ENSXCOG00000018078	dbr1	100	96.111	ENSPMEG00000010080	dbr1	100	96.111	Poecilia_mexicana
ENSXCOG00000018078	dbr1	100	95.028	ENSPREG00000020157	dbr1	100	93.738	Poecilia_reticulata
ENSXCOG00000018078	dbr1	99	56.044	ENSPPYG00000014139	DBR1	99	55.818	Pongo_abelii
ENSXCOG00000018078	dbr1	70	66.491	ENSPCAG00000012956	DBR1	97	66.491	Procavia_capensis
ENSXCOG00000018078	dbr1	98	55.576	ENSPCOG00000016894	DBR1	99	55.678	Propithecus_coquereli
ENSXCOG00000018078	dbr1	98	48.519	ENSPVAG00000007713	DBR1	99	48.446	Pteropus_vampyrus
ENSXCOG00000018078	dbr1	100	77.046	ENSPNYG00000015453	dbr1	100	78.891	Pundamilia_nyererei
ENSXCOG00000018078	dbr1	99	66.318	ENSPNAG00000025595	dbr1	99	68.586	Pygocentrus_nattereri
ENSXCOG00000018078	dbr1	99	56.284	ENSRNOG00000014588	Dbr1	99	56.466	Rattus_norvegicus
ENSXCOG00000018078	dbr1	98	56.506	ENSRBIG00000045002	DBR1	99	56.330	Rhinopithecus_bieti
ENSXCOG00000018078	dbr1	98	56.354	ENSRROG00000044819	DBR1	99	56.000	Rhinopithecus_roxellana
ENSXCOG00000018078	dbr1	53	38.596	YKL149C	DBR1	83	38.889	Saccharomyces_cerevisiae
ENSXCOG00000018078	dbr1	98	56.722	ENSSBOG00000032048	DBR1	99	56.545	Saimiri_boliviensis_boliviensis
ENSXCOG00000018078	dbr1	99	56.697	ENSSHAG00000006752	DBR1	100	56.466	Sarcophilus_harrisii
ENSXCOG00000018078	dbr1	99	68.784	ENSSFOG00015011410	dbr1	99	67.572	Scleropages_formosus
ENSXCOG00000018078	dbr1	99	76.386	ENSSMAG00000016078	dbr1	99	78.891	Scophthalmus_maximus
ENSXCOG00000018078	dbr1	99	79.329	ENSSDUG00000017849	dbr1	99	79.505	Seriola_dumerili
ENSXCOG00000018078	dbr1	99	79.078	ENSSLDG00000019891	dbr1	99	79.433	Seriola_lalandi_dorsalis
ENSXCOG00000018078	dbr1	51	72.973	ENSSARG00000003148	-	74	72.973	Sorex_araneus
ENSXCOG00000018078	dbr1	100	51.083	ENSSARG00000009558	-	78	59.102	Sorex_araneus
ENSXCOG00000018078	dbr1	93	54.043	ENSSPUG00000004724	DBR1	97	54.043	Sphenodon_punctatus
ENSXCOG00000018078	dbr1	100	81.835	ENSSPAG00000016892	dbr1	100	80.935	Stegastes_partitus
ENSXCOG00000018078	dbr1	99	56.466	ENSSSCG00000031098	DBR1	99	56.102	Sus_scrofa
ENSXCOG00000018078	dbr1	96	55.094	ENSTGUG00000007073	DBR1	100	54.906	Taeniopygia_guttata
ENSXCOG00000018078	dbr1	100	72.143	ENSTRUG00000021594	dbr1	99	71.429	Takifugu_rubripes
ENSXCOG00000018078	dbr1	99	71.661	ENSTNIG00000006710	dbr1	100	71.661	Tetraodon_nigroviridis
ENSXCOG00000018078	dbr1	99	55.920	ENSTTRG00000004020	DBR1	99	55.556	Tursiops_truncatus
ENSXCOG00000018078	dbr1	99	56.364	ENSUAMG00000004639	DBR1	99	56.000	Ursus_americanus
ENSXCOG00000018078	dbr1	98	56.169	ENSUMAG00000015012	DBR1	99	55.818	Ursus_maritimus
ENSXCOG00000018078	dbr1	99	52.182	ENSVPAG00000011711	DBR1	99	52.000	Vicugna_pacos
ENSXCOG00000018078	dbr1	98	55.535	ENSVVUG00000026604	DBR1	99	55.191	Vulpes_vulpes
ENSXCOG00000018078	dbr1	99	59.555	ENSXETG00000027491	dbr1	99	59.555	Xenopus_tropicalis
ENSXCOG00000018078	dbr1	100	99.074	ENSXMAG00000007311	dbr1	100	99.074	Xiphophorus_maculatus