EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018094 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5219 bases
Position: chrKQ557208.1:9122595-9127813
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024227	MMR_HSR1	PF01926.23	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024518	-	1323	-	ENSXCOP00000024227	440 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018094	si:ch211-11k18.4	99	59.645	ENSXCOG00000017002	si:dkey-98f17.5	100	59.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018094	si:ch211-11k18.4	99	84.187	ENSAPOG00000018833	si:ch211-11k18.4	99	84.187	Acanthochromis_polyacanthus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.603	ENSAPOG00000010378	si:dkey-98f17.5	100	59.603	Acanthochromis_polyacanthus
ENSXCOG00000018094	si:ch211-11k18.4	99	80.357	ENSACIG00000006696	si:ch211-11k18.4	99	81.250	Amphilophus_citrinellus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.202	ENSACIG00000017719	si:dkey-98f17.5	100	59.202	Amphilophus_citrinellus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.823	ENSAOCG00000008661	si:dkey-98f17.5	100	59.823	Amphiprion_ocellaris
ENSXCOG00000018094	si:ch211-11k18.4	100	84.479	ENSAOCG00000014284	si:ch211-11k18.4	100	84.479	Amphiprion_ocellaris
ENSXCOG00000018094	si:ch211-11k18.4	100	84.257	ENSAPEG00000014910	si:ch211-11k18.4	100	84.257	Amphiprion_percula
ENSXCOG00000018094	si:ch211-11k18.4	99	59.823	ENSAPEG00000022447	si:dkey-98f17.5	100	59.823	Amphiprion_percula
ENSXCOG00000018094	si:ch211-11k18.4	100	81.637	ENSATEG00000004775	si:ch211-11k18.4	100	82.262	Anabas_testudineus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.823	ENSATEG00000007188	si:dkey-98f17.5	100	59.823	Anabas_testudineus
ENSXCOG00000018094	si:ch211-11k18.4	99	63.004	ENSACAG00000028632	-	98	63.901	Anolis_carolinensis
ENSXCOG00000018094	si:ch211-11k18.4	99	59.161	ENSACLG00000001308	si:dkey-98f17.5	100	59.161	Astatotilapia_calliptera
ENSXCOG00000018094	si:ch211-11k18.4	99	81.278	ENSACLG00000007907	si:ch211-11k18.4	99	82.405	Astatotilapia_calliptera
ENSXCOG00000018094	si:ch211-11k18.4	99	60.044	ENSAMXG00000001190	si:dkey-98f17.5	100	60.044	Astyanax_mexicanus
ENSXCOG00000018094	si:ch211-11k18.4	99	78.000	ENSAMXG00000017817	si:ch211-11k18.4	100	78.000	Astyanax_mexicanus
ENSXCOG00000018094	si:ch211-11k18.4	84	61.765	ENSCING00000020807	-	98	61.765	Ciona_intestinalis
ENSXCOG00000018094	si:ch211-11k18.4	99	58.093	ENSCSAVG00000009987	-	100	58.222	Ciona_savignyi
ENSXCOG00000018094	si:ch211-11k18.4	100	82.045	ENSCSEG00000017661	si:ch211-11k18.4	100	82.045	Cynoglossus_semilaevis
ENSXCOG00000018094	si:ch211-11k18.4	99	59.867	ENSCSEG00000017512	si:dkey-98f17.5	98	60.471	Cynoglossus_semilaevis
ENSXCOG00000018094	si:ch211-11k18.4	100	86.168	ENSCVAG00000015346	si:ch211-11k18.4	100	86.253	Cyprinodon_variegatus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.645	ENSCVAG00000011351	si:dkey-98f17.5	100	59.645	Cyprinodon_variegatus
ENSXCOG00000018094	si:ch211-11k18.4	99	76.264	ENSDARG00000087869	si:ch211-11k18.4	100	89.796	Danio_rerio
ENSXCOG00000018094	si:ch211-11k18.4	98	59.910	ENSDARG00000068863	si:dkey-98f17.5	100	59.910	Danio_rerio
ENSXCOG00000018094	si:ch211-11k18.4	83	58.696	ENSEBUG00000007620	si:dkey-98f17.5	89	62.462	Eptatretus_burgeri
ENSXCOG00000018094	si:ch211-11k18.4	99	58.720	ENSELUG00000003365	si:dkey-98f17.5	100	58.720	Esox_lucius
ENSXCOG00000018094	si:ch211-11k18.4	100	84.701	ENSFHEG00000019820	si:ch211-11k18.4	100	84.701	Fundulus_heteroclitus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.424	ENSFHEG00000012744	si:dkey-98f17.5	100	59.424	Fundulus_heteroclitus
ENSXCOG00000018094	si:ch211-11k18.4	88	74.619	ENSGMOG00000003492	si:ch211-11k18.4	98	74.619	Gadus_morhua
ENSXCOG00000018094	si:ch211-11k18.4	99	59.161	ENSGAFG00000012362	si:dkey-98f17.5	89	59.161	Gambusia_affinis
ENSXCOG00000018094	si:ch211-11k18.4	100	88.248	ENSGAFG00000005677	si:ch211-11k18.4	100	88.692	Gambusia_affinis
ENSXCOG00000018094	si:ch211-11k18.4	59	73.846	ENSGACG00000009399	si:dkey-98f17.5	100	73.846	Gasterosteus_aculeatus
ENSXCOG00000018094	si:ch211-11k18.4	84	86.327	ENSGACG00000013134	si:ch211-11k18.4	98	83.249	Gasterosteus_aculeatus
ENSXCOG00000018094	si:ch211-11k18.4	99	81.498	ENSHBUG00000020638	si:ch211-11k18.4	99	82.628	Haplochromis_burtoni
ENSXCOG00000018094	si:ch211-11k18.4	99	59.382	ENSHBUG00000008331	si:dkey-98f17.5	100	59.382	Haplochromis_burtoni
ENSXCOG00000018094	si:ch211-11k18.4	99	81.818	ENSHCOG00000014773	si:ch211-11k18.4	100	81.818	Hippocampus_comes
ENSXCOG00000018094	si:ch211-11k18.4	99	59.276	ENSHCOG00000016505	si:dkey-98f17.5	98	59.276	Hippocampus_comes
ENSXCOG00000018094	si:ch211-11k18.4	99	58.093	ENSIPUG00000019981	si:dkey-98f17.5	100	58.093	Ictalurus_punctatus
ENSXCOG00000018094	si:ch211-11k18.4	83	70.732	ENSIPUG00000016694	si:ch211-11k18.4	81	70.732	Ictalurus_punctatus
ENSXCOG00000018094	si:ch211-11k18.4	96	78.066	ENSIPUG00000016678	si:ch211-11k18.4	99	78.302	Ictalurus_punctatus
ENSXCOG00000018094	si:ch211-11k18.4	99	58.278	ENSKMAG00000014997	si:dkey-98f17.5	100	58.278	Kryptolebias_marmoratus
ENSXCOG00000018094	si:ch211-11k18.4	99	82.667	ENSKMAG00000009327	si:ch211-11k18.4	99	83.111	Kryptolebias_marmoratus
ENSXCOG00000018094	si:ch211-11k18.4	99	58.940	ENSLBEG00000012756	si:dkey-98f17.5	100	58.940	Labrus_bergylta
ENSXCOG00000018094	si:ch211-11k18.4	99	68.071	ENSLACG00000006280	si:ch211-11k18.4	100	69.011	Latimeria_chalumnae
ENSXCOG00000018094	si:ch211-11k18.4	98	59.556	ENSLACG00000017433	si:dkey-98f17.5	98	60.090	Latimeria_chalumnae
ENSXCOG00000018094	si:ch211-11k18.4	99	61.556	ENSLACG00000004899	-	99	61.556	Latimeria_chalumnae
ENSXCOG00000018094	si:ch211-11k18.4	99	58.720	ENSLOCG00000003824	si:dkey-98f17.5	99	58.720	Lepisosteus_oculatus
ENSXCOG00000018094	si:ch211-11k18.4	96	83.141	ENSMAMG00000002536	si:ch211-11k18.4	99	83.796	Mastacembelus_armatus
ENSXCOG00000018094	si:ch211-11k18.4	99	58.980	ENSMAMG00000014528	si:dkey-98f17.5	100	58.980	Mastacembelus_armatus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.382	ENSMZEG00005016572	si:dkey-98f17.5	100	59.382	Maylandia_zebra
ENSXCOG00000018094	si:ch211-11k18.4	99	81.057	ENSMZEG00005008941	si:ch211-11k18.4	99	82.183	Maylandia_zebra
ENSXCOG00000018094	si:ch211-11k18.4	99	78.747	ENSMMOG00000012485	si:ch211-11k18.4	99	78.747	Mola_mola
ENSXCOG00000018094	si:ch211-11k18.4	98	60.682	ENSMALG00000012761	si:dkey-98f17.5	100	60.909	Monopterus_albus
ENSXCOG00000018094	si:ch211-11k18.4	100	81.858	ENSMALG00000019735	si:ch211-11k18.4	100	82.483	Monopterus_albus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.202	ENSNBRG00000006068	si:dkey-98f17.5	100	59.202	Neolamprologus_brichardi
ENSXCOG00000018094	si:ch211-11k18.4	96	80.778	ENSNBRG00000002220	si:ch211-11k18.4	98	81.944	Neolamprologus_brichardi
ENSXCOG00000018094	si:ch211-11k18.4	99	82.889	ENSONIG00000019412	si:ch211-11k18.4	99	83.296	Oreochromis_niloticus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.603	ENSONIG00000013568	si:dkey-98f17.5	100	59.603	Oreochromis_niloticus
ENSXCOG00000018094	si:ch211-11k18.4	90	60.723	ENSORLG00000007958	si:dkey-98f17.5	95	60.723	Oryzias_latipes
ENSXCOG00000018094	si:ch211-11k18.4	100	81.278	ENSORLG00000012015	si:ch211-11k18.4	100	82.262	Oryzias_latipes
ENSXCOG00000018094	si:ch211-11k18.4	99	59.161	ENSORLG00020013350	si:dkey-98f17.5	100	58.758	Oryzias_latipes_hni
ENSXCOG00000018094	si:ch211-11k18.4	100	81.457	ENSORLG00020012386	si:ch211-11k18.4	100	82.040	Oryzias_latipes_hni
ENSXCOG00000018094	si:ch211-11k18.4	100	81.778	ENSORLG00015022862	si:ch211-11k18.4	100	82.483	Oryzias_latipes_hsok
ENSXCOG00000018094	si:ch211-11k18.4	99	58.901	ENSORLG00015002000	si:dkey-98f17.5	100	58.901	Oryzias_latipes_hsok
ENSXCOG00000018094	si:ch211-11k18.4	99	58.315	ENSOMEG00000003154	si:dkey-98f17.5	100	58.315	Oryzias_melastigma
ENSXCOG00000018094	si:ch211-11k18.4	100	83.296	ENSOMEG00000018686	si:ch211-11k18.4	100	83.296	Oryzias_melastigma
ENSXCOG00000018094	si:ch211-11k18.4	99	72.222	ENSPKIG00000023918	-	98	73.111	Paramormyrops_kingsleyae
ENSXCOG00000018094	si:ch211-11k18.4	99	77.455	ENSPKIG00000018807	si:ch211-11k18.4	100	77.556	Paramormyrops_kingsleyae
ENSXCOG00000018094	si:ch211-11k18.4	99	58.850	ENSPKIG00000024621	si:dkey-98f17.5	100	58.850	Paramormyrops_kingsleyae
ENSXCOG00000018094	si:ch211-11k18.4	99	60.089	ENSPMGG00000019065	si:dkey-98f17.5	100	59.645	Periophthalmus_magnuspinnatus
ENSXCOG00000018094	si:ch211-11k18.4	100	82.705	ENSPMGG00000016507	si:ch211-11k18.4	100	82.705	Periophthalmus_magnuspinnatus
ENSXCOG00000018094	si:ch211-11k18.4	100	90.022	ENSPFOG00000007976	si:ch211-11k18.4	100	90.466	Poecilia_formosa
ENSXCOG00000018094	si:ch211-11k18.4	99	59.211	ENSPFOG00000015142	si:dkey-98f17.5	100	59.211	Poecilia_formosa
ENSXCOG00000018094	si:ch211-11k18.4	99	59.603	ENSPLAG00000003709	si:dkey-98f17.5	100	59.603	Poecilia_latipinna
ENSXCOG00000018094	si:ch211-11k18.4	100	90.022	ENSPLAG00000019794	si:ch211-11k18.4	100	90.466	Poecilia_latipinna
ENSXCOG00000018094	si:ch211-11k18.4	99	59.603	ENSPMEG00000018709	si:dkey-98f17.5	94	59.603	Poecilia_mexicana
ENSXCOG00000018094	si:ch211-11k18.4	100	90.244	ENSPMEG00000024198	si:ch211-11k18.4	100	90.687	Poecilia_mexicana
ENSXCOG00000018094	si:ch211-11k18.4	98	61.111	ENSPREG00000000708	si:dkey-98f17.5	100	61.111	Poecilia_reticulata
ENSXCOG00000018094	si:ch211-11k18.4	88	90.609	ENSPREG00000015319	si:ch211-11k18.4	91	89.500	Poecilia_reticulata
ENSXCOG00000018094	si:ch211-11k18.4	99	81.498	ENSPNYG00000017099	si:ch211-11k18.4	99	82.628	Pundamilia_nyererei
ENSXCOG00000018094	si:ch211-11k18.4	99	59.382	ENSPNYG00000017266	si:dkey-98f17.5	100	59.382	Pundamilia_nyererei
ENSXCOG00000018094	si:ch211-11k18.4	99	78.936	ENSPNAG00000022138	si:ch211-11k18.4	99	79.065	Pygocentrus_nattereri
ENSXCOG00000018094	si:ch211-11k18.4	99	60.220	ENSPNAG00000021352	si:dkey-98f17.5	100	60.220	Pygocentrus_nattereri
ENSXCOG00000018094	si:ch211-11k18.4	99	74.833	ENSSFOG00015000985	si:ch211-11k18.4	94	74.833	Scleropages_formosus
ENSXCOG00000018094	si:ch211-11k18.4	99	57.428	ENSSFOG00015017965	si:dkey-98f17.5	100	56.763	Scleropages_formosus
ENSXCOG00000018094	si:ch211-11k18.4	100	81.596	ENSSMAG00000009651	si:ch211-11k18.4	100	82.040	Scophthalmus_maximus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.341	ENSSMAG00000011905	si:dkey-98f17.5	100	59.424	Scophthalmus_maximus
ENSXCOG00000018094	si:ch211-11k18.4	98	59.111	ENSSDUG00000013457	si:dkey-98f17.5	99	59.111	Seriola_dumerili
ENSXCOG00000018094	si:ch211-11k18.4	100	83.186	ENSSDUG00000016411	si:ch211-11k18.4	100	83.592	Seriola_dumerili
ENSXCOG00000018094	si:ch211-11k18.4	100	83.186	ENSSLDG00000019145	si:ch211-11k18.4	100	83.592	Seriola_lalandi_dorsalis
ENSXCOG00000018094	si:ch211-11k18.4	98	58.482	ENSSLDG00000025395	si:dkey-98f17.5	99	58.482	Seriola_lalandi_dorsalis
ENSXCOG00000018094	si:ch211-11k18.4	87	63.889	ENSSPUG00000010096	-	99	64.975	Sphenodon_punctatus
ENSXCOG00000018094	si:ch211-11k18.4	100	82.522	ENSSPAG00000010697	si:ch211-11k18.4	100	83.370	Stegastes_partitus
ENSXCOG00000018094	si:ch211-11k18.4	99	59.645	ENSSPAG00000018800	si:dkey-98f17.5	100	59.645	Stegastes_partitus
ENSXCOG00000018094	si:ch211-11k18.4	100	81.375	ENSTRUG00000020291	si:ch211-11k18.4	100	81.818	Takifugu_rubripes
ENSXCOG00000018094	si:ch211-11k18.4	99	59.161	ENSTRUG00000021287	si:dkey-98f17.5	100	59.161	Takifugu_rubripes
ENSXCOG00000018094	si:ch211-11k18.4	99	66.593	ENSXETG00000031783	-	99	66.593	Xenopus_tropicalis
ENSXCOG00000018094	si:ch211-11k18.4	99	59.202	ENSXMAG00000007688	si:dkey-98f17.5	95	59.202	Xiphophorus_maculatus
ENSXCOG00000018094	si:ch211-11k18.4	100	100.000	ENSXMAG00000021235	si:ch211-11k18.4	100	100.000	Xiphophorus_maculatus