EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018117 (Gene tree)
Gene ID: -
Gene Symbol: znf710b
Alias: -
Full Name: zinc finger protein 710b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9941 bases
Position: chrKQ557219.1:6399295-6409235
Accession: ZDB-GENE-120503-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	1	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	2	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	3	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	4	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	5	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	6	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	7	8
ENSXCOP00000024263	zf-C2H2	PF00096.26	3.5e-45	8	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	1	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	2	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	3	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	4	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	5	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	6	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	7	8
ENSXCOP00000024262	zf-C2H2	PF00096.26	2.6e-42	8	8
ENSXCOP00000024263	zf-met	PF12874.7	6.3e-06	1	2
ENSXCOP00000024263	zf-met	PF12874.7	6.3e-06	2	2
ENSXCOP00000024262	zf-met	PF12874.7	2.9e-05	1	2
ENSXCOP00000024262	zf-met	PF12874.7	2.9e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024553	-	2166	-	ENSXCOP00000024262	721 (aa)	-	-
ENSXCOT00000024554	-	1986	-	ENSXCOP00000024263	661 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018117	znf710b	50	37.079	ENSXCOG00000012921	-	98	37.786
ENSXCOG00000018117	znf710b	53	39.080	ENSXCOG00000002512	-	83	39.080
ENSXCOG00000018117	znf710b	54	41.096	ENSXCOG00000010567	-	91	41.096
ENSXCOG00000018117	znf710b	61	33.094	ENSXCOG00000003538	-	100	38.202
ENSXCOG00000018117	znf710b	50	43.878	ENSXCOG00000008062	-	97	43.878
ENSXCOG00000018117	znf710b	61	38.281	ENSXCOG00000007994	-	95	36.137
ENSXCOG00000018117	znf710b	52	47.273	ENSXCOG00000003530	-	82	37.023
ENSXCOG00000018117	znf710b	51	36.232	ENSXCOG00000013787	-	67	36.232
ENSXCOG00000018117	znf710b	53	36.686	ENSXCOG00000008083	-	92	40.000
ENSXCOG00000018117	znf710b	56	35.714	ENSXCOG00000017871	zgc:113343	76	35.714
ENSXCOG00000018117	znf710b	68	43.590	ENSXCOG00000013066	-	88	43.590
ENSXCOG00000018117	znf710b	54	38.272	ENSXCOG00000007368	-	96	38.871
ENSXCOG00000018117	znf710b	59	35.500	ENSXCOG00000009997	-	62	35.500
ENSXCOG00000018117	znf710b	50	35.780	ENSXCOG00000019861	-	64	35.780
ENSXCOG00000018117	znf710b	51	36.145	ENSXCOG00000009597	ZNF319	90	36.156
ENSXCOG00000018117	znf710b	59	34.826	ENSXCOG00000013504	znf384l	64	34.826
ENSXCOG00000018117	znf710b	56	30.556	ENSXCOG00000000036	znf341	59	33.621
ENSXCOG00000018117	znf710b	54	36.994	ENSXCOG00000010576	-	90	36.994
ENSXCOG00000018117	znf710b	56	38.095	ENSXCOG00000016307	-	88	38.220
ENSXCOG00000018117	znf710b	54	38.136	ENSXCOG00000006614	-	97	38.136
ENSXCOG00000018117	znf710b	59	34.982	ENSXCOG00000015312	-	99	34.982
ENSXCOG00000018117	znf710b	56	34.503	ENSXCOG00000009798	-	81	34.503
ENSXCOG00000018117	znf710b	60	41.379	ENSXCOG00000019443	-	98	37.584
ENSXCOG00000018117	znf710b	52	39.080	ENSXCOG00000020768	-	82	39.080
ENSXCOG00000018117	znf710b	51	36.869	ENSXCOG00000007406	-	99	40.212
ENSXCOG00000018117	znf710b	50	36.800	ENSXCOG00000015947	-	90	36.800
ENSXCOG00000018117	znf710b	56	34.058	ENSXCOG00000007396	-	100	37.079
ENSXCOG00000018117	znf710b	57	33.136	ENSXCOG00000018315	-	92	36.170
ENSXCOG00000018117	znf710b	50	34.783	ENSXCOG00000019675	scrt1b	64	35.616
ENSXCOG00000018117	znf710b	65	37.383	ENSXCOG00000013004	-	80	37.383
ENSXCOG00000018117	znf710b	53	34.536	ENSXCOG00000013870	-	79	34.536
ENSXCOG00000018117	znf710b	59	35.329	ENSXCOG00000001200	-	95	36.760
ENSXCOG00000018117	znf710b	50	42.857	ENSXCOG00000002898	-	87	42.857
ENSXCOG00000018117	znf710b	54	34.875	ENSXCOG00000003435	-	96	34.875
ENSXCOG00000018117	znf710b	61	40.379	ENSXCOG00000003431	-	93	40.379
ENSXCOG00000018117	znf710b	61	34.328	ENSXCOG00000003438	-	92	34.328
ENSXCOG00000018117	znf710b	50	40.566	ENSXCOG00000010950	si:dkey-210j14.3	64	40.566
ENSXCOG00000018117	znf710b	51	39.252	ENSXCOG00000019481	-	84	39.252
ENSXCOG00000018117	znf710b	52	36.571	ENSXCOG00000019492	-	96	36.571
ENSXCOG00000018117	znf710b	50	30.824	ENSXCOG00000003001	-	90	30.824
ENSXCOG00000018117	znf710b	61	37.778	ENSXCOG00000003441	-	76	36.293
ENSXCOG00000018117	znf710b	50	42.045	ENSXCOG00000007937	-	76	42.045
ENSXCOG00000018117	znf710b	56	37.952	ENSXCOG00000008116	-	99	37.952
ENSXCOG00000018117	znf710b	55	39.355	ENSXCOG00000003493	-	66	39.355
ENSXCOG00000018117	znf710b	55	37.563	ENSXCOG00000003499	-	84	37.563
ENSXCOG00000018117	znf710b	57	37.607	ENSXCOG00000019149	znf526	87	33.333
ENSXCOG00000018117	znf710b	58	37.248	ENSXCOG00000009003	-	91	44.828
ENSXCOG00000018117	znf710b	52	37.073	ENSXCOG00000019401	-	95	42.857
ENSXCOG00000018117	znf710b	51	35.593	ENSXCOG00000003451	-	91	43.678
ENSXCOG00000018117	znf710b	52	34.091	ENSXCOG00000009992	zbtb47b	87	34.884
ENSXCOG00000018117	znf710b	50	41.111	ENSXCOG00000007529	-	97	41.111
ENSXCOG00000018117	znf710b	51	32.803	ENSXCOG00000008567	prdm5	73	35.484
ENSXCOG00000018117	znf710b	51	36.330	ENSXCOG00000007957	-	84	36.330
ENSXCOG00000018117	znf710b	58	39.394	ENSXCOG00000019382	-	86	38.525
ENSXCOG00000018117	znf710b	51	36.905	ENSXCOG00000007414	-	92	34.962
ENSXCOG00000018117	znf710b	54	40.698	ENSXCOG00000007987	-	88	40.698
ENSXCOG00000018117	znf710b	53	43.023	ENSXCOG00000016567	-	79	43.023
ENSXCOG00000018117	znf710b	60	38.735	ENSXCOG00000003896	-	60	37.037
ENSXCOG00000018117	znf710b	50	42.453	ENSXCOG00000009186	-	99	43.810
ENSXCOG00000018117	znf710b	56	30.928	ENSXCOG00000003093	-	98	32.976
ENSXCOG00000018117	znf710b	52	35.897	ENSXCOG00000011725	-	97	36.482
ENSXCOG00000018117	znf710b	60	47.692	ENSXCOG00000007981	-	97	32.995
ENSXCOG00000018117	znf710b	52	36.264	ENSXCOG00000001292	-	85	36.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018117	znf710b	100	94.321	ENSAPOG00000021512	znf710b	100	94.372	Acanthochromis_polyacanthus
ENSXCOG00000018117	znf710b	100	93.508	ENSACIG00000020982	znf710b	100	93.508	Amphilophus_citrinellus
ENSXCOG00000018117	znf710b	100	93.213	ENSACLG00000013604	znf710b	100	93.218	Astatotilapia_calliptera
ENSXCOG00000018117	znf710b	98	90.537	ENSCSEG00000012005	znf710b	100	90.346	Cynoglossus_semilaevis
ENSXCOG00000018117	znf710b	100	75.497	ENSELUG00000017700	znf710b	100	76.190	Esox_lucius
ENSXCOG00000018117	znf710b	99	95.694	ENSFHEG00000014039	znf710b	100	96.681	Fundulus_heteroclitus
ENSXCOG00000018117	znf710b	61	94.349	ENSGMOG00000017555	znf710b	100	94.349	Gadus_morhua
ENSXCOG00000018117	znf710b	98	91.632	ENSGACG00000016481	znf710b	99	91.632	Gasterosteus_aculeatus
ENSXCOG00000018117	znf710b	90	78.776	ENSHBUG00000005895	-	98	79.883	Haplochromis_burtoni
ENSXCOG00000018117	znf710b	100	92.936	ENSHBUG00000023268	znf710b	100	92.936	Haplochromis_burtoni
ENSXCOG00000018117	znf710b	100	88.643	ENSHCOG00000018972	znf710b	100	90.909	Hippocampus_comes
ENSXCOG00000018117	znf710b	100	88.986	ENSKMAG00000017329	znf710b	100	89.205	Kryptolebias_marmoratus
ENSXCOG00000018117	znf710b	96	93.795	ENSMAMG00000001213	znf710b	100	93.795	Mastacembelus_armatus
ENSXCOG00000018117	znf710b	100	93.213	ENSMZEG00005008625	znf710b	100	93.218	Maylandia_zebra
ENSXCOG00000018117	znf710b	100	86.078	ENSMMOG00000000136	znf710b	100	86.078	Mola_mola
ENSXCOG00000018117	znf710b	96	93.506	ENSNBRG00000000292	znf710b	100	93.506	Neolamprologus_brichardi
ENSXCOG00000018117	znf710b	100	88.857	ENSONIG00000002589	znf710b	99	90.377	Oreochromis_niloticus
ENSXCOG00000018117	znf710b	100	84.805	ENSORLG00000012610	znf710b	99	85.062	Oryzias_latipes
ENSXCOG00000018117	znf710b	100	88.679	ENSORLG00020000009	znf710b	99	89.261	Oryzias_latipes_hni
ENSXCOG00000018117	znf710b	100	84.892	ENSPMGG00000008771	znf710b	98	86.076	Periophthalmus_magnuspinnatus
ENSXCOG00000018117	znf710b	96	98.124	ENSPFOG00000017353	znf710b	100	98.124	Poecilia_formosa
ENSXCOG00000018117	znf710b	96	98.268	ENSPLAG00000001306	znf710b	100	98.268	Poecilia_latipinna
ENSXCOG00000018117	znf710b	96	98.413	ENSPMEG00000012507	znf710b	100	98.413	Poecilia_mexicana
ENSXCOG00000018117	znf710b	100	98.892	ENSPREG00000005030	znf710b	100	98.892	Poecilia_reticulata
ENSXCOG00000018117	znf710b	100	93.213	ENSPNYG00000019563	znf710b	100	93.213	Pundamilia_nyererei
ENSXCOG00000018117	znf710b	100	91.967	ENSSMAG00000007380	znf710b	100	91.967	Scophthalmus_maximus
ENSXCOG00000018117	znf710b	96	93.939	ENSSDUG00000004144	znf710b	100	93.939	Seriola_dumerili
ENSXCOG00000018117	znf710b	100	92.030	ENSSLDG00000003269	znf710b	100	92.030	Seriola_lalandi_dorsalis
ENSXCOG00000018117	znf710b	87	88.889	ENSTNIG00000011367	znf710b	100	88.889	Tetraodon_nigroviridis
ENSXCOG00000018117	znf710b	100	99.446	ENSXMAG00000018118	znf710b	99	99.446	Xiphophorus_maculatus