EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018245 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7012 bases
Position: chrKQ557208.1:22985603-22992614
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024441	tRNA_int_end_N2	PF12928.7	7.3e-20	1	1
ENSXCOP00000024445	tRNA_int_end_N2	PF12928.7	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024735	-	1332	-	ENSXCOP00000024441	443 (aa)	-	-
ENSXCOT00000024739	-	1215	-	ENSXCOP00000024445	404 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018245	tsen54	87	60.625	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSXCOG00000018245	tsen54	100	66.187	ENSAPOG00000009659	tsen54	100	66.187	Acanthochromis_polyacanthus
ENSXCOG00000018245	tsen54	99	41.801	ENSAMEG00000009414	TSEN54	96	36.452	Ailuropoda_melanoleuca
ENSXCOG00000018245	tsen54	100	65.707	ENSAOCG00000000152	tsen54	95	63.158	Amphiprion_ocellaris
ENSXCOG00000018245	tsen54	100	65.468	ENSAPEG00000018931	tsen54	95	62.955	Amphiprion_percula
ENSXCOG00000018245	tsen54	100	61.609	ENSATEG00000019860	tsen54	97	60.659	Anabas_testudineus
ENSXCOG00000018245	tsen54	99	42.466	ENSAPLG00000009419	TSEN54	99	41.410	Anas_platyrhynchos
ENSXCOG00000018245	tsen54	87	63.473	ENSACAG00000006714	TSEN54	98	43.860	Anolis_carolinensis
ENSXCOG00000018245	tsen54	95	61.250	ENSANAG00000024061	TSEN54	96	42.941	Aotus_nancymaae
ENSXCOG00000018245	tsen54	100	63.549	ENSACLG00000019800	tsen54	97	60.643	Astatotilapia_calliptera
ENSXCOG00000018245	tsen54	99	54.436	ENSAMXG00000006546	tsen54	96	50.605	Astyanax_mexicanus
ENSXCOG00000018245	tsen54	99	43.750	ENSBTAG00000000824	TSEN54	97	43.969	Bos_taurus
ENSXCOG00000018245	tsen54	87	61.250	ENSCJAG00000014278	TSEN54	96	42.941	Callithrix_jacchus
ENSXCOG00000018245	tsen54	99	43.883	ENSCAFG00000004798	TSEN54	97	43.992	Canis_familiaris
ENSXCOG00000018245	tsen54	99	43.883	ENSCAFG00020000312	TSEN54	97	43.992	Canis_lupus_dingo
ENSXCOG00000018245	tsen54	99	43.452	ENSCHIG00000019908	TSEN54	97	43.936	Capra_hircus
ENSXCOG00000018245	tsen54	99	42.130	ENSTSYG00000037439	TSEN54	99	42.702	Carlito_syrichta
ENSXCOG00000018245	tsen54	87	60.625	ENSCCAG00000036624	TSEN54	96	42.941	Cebus_capucinus
ENSXCOG00000018245	tsen54	86	62.025	ENSCATG00000042877	TSEN54	96	41.833	Cercocebus_atys
ENSXCOG00000018245	tsen54	99	44.204	ENSCLAG00000002924	TSEN54	96	43.615	Chinchilla_lanigera
ENSXCOG00000018245	tsen54	87	61.875	ENSCSAG00000004809	TSEN54	97	36.538	Chlorocebus_sabaeus
ENSXCOG00000018245	tsen54	87	62.874	ENSCPBG00000028071	TSEN54	75	62.874	Chrysemys_picta_bellii
ENSXCOG00000018245	tsen54	86	62.025	ENSCANG00000028053	TSEN54	97	37.160	Colobus_angolensis_palliatus
ENSXCOG00000018245	tsen54	99	44.204	ENSCGRG00001020029	Tsen54	97	44.204	Cricetulus_griseus_chok1gshd
ENSXCOG00000018245	tsen54	99	42.857	ENSCGRG00000016289	Tsen54	99	42.534	Cricetulus_griseus_crigri
ENSXCOG00000018245	tsen54	99	52.732	ENSCSEG00000020586	tsen54	99	52.732	Cynoglossus_semilaevis
ENSXCOG00000018245	tsen54	54	87.368	ENSCVAG00000006741	-	92	87.368	Cyprinodon_variegatus
ENSXCOG00000018245	tsen54	99	55.396	ENSDARG00000036844	tsen54	100	55.635	Danio_rerio
ENSXCOG00000018245	tsen54	91	56.667	ENSDNOG00000018452	TSEN54	97	42.330	Dasypus_novemcinctus
ENSXCOG00000018245	tsen54	85	62.658	ENSDORG00000004073	Tsen54	97	41.257	Dipodomys_ordii
ENSXCOG00000018245	tsen54	98	32.692	ENSEBUG00000005203	TSEN54	82	36.797	Eptatretus_burgeri
ENSXCOG00000018245	tsen54	99	44.037	ENSEASG00005000579	TSEN54	97	37.428	Equus_asinus_asinus
ENSXCOG00000018245	tsen54	99	43.908	ENSECAG00000004924	TSEN54	97	38.241	Equus_caballus
ENSXCOG00000018245	tsen54	75	67.000	ENSEEUG00000008467	TSEN54	94	42.334	Erinaceus_europaeus
ENSXCOG00000018245	tsen54	97	72.500	ENSELUG00000017703	tsen54	76	72.500	Esox_lucius
ENSXCOG00000018245	tsen54	99	42.923	ENSFCAG00000023712	TSEN54	97	38.760	Felis_catus
ENSXCOG00000018245	tsen54	99	43.981	ENSFALG00000001119	TSEN54	92	42.387	Ficedula_albicollis
ENSXCOG00000018245	tsen54	99	43.707	ENSFDAG00000019090	TSEN54	99	41.964	Fukomys_damarensis
ENSXCOG00000018245	tsen54	100	75.181	ENSFHEG00000005470	tsen54	97	72.393	Fundulus_heteroclitus
ENSXCOG00000018245	tsen54	84	63.158	ENSGMOG00000013146	tsen54	83	63.158	Gadus_morhua
ENSXCOG00000018245	tsen54	99	39.726	ENSGALG00000047163	TSEN54	99	35.057	Gallus_gallus
ENSXCOG00000018245	tsen54	100	87.871	ENSGAFG00000005111	tsen54	97	83.576	Gambusia_affinis
ENSXCOG00000018245	tsen54	99	59.623	ENSGACG00000014987	tsen54	100	59.414	Gasterosteus_aculeatus
ENSXCOG00000018245	tsen54	87	63.473	ENSGAGG00000006825	TSEN54	74	63.473	Gopherus_agassizii
ENSXCOG00000018245	tsen54	86	62.581	ENSGGOG00000009417	TSEN54	99	43.762	Gorilla_gorilla
ENSXCOG00000018245	tsen54	97	59.305	ENSHBUG00000018296	tsen54	99	59.204	Haplochromis_burtoni
ENSXCOG00000018245	tsen54	99	44.204	ENSHGLG00000007979	TSEN54	97	43.811	Heterocephalus_glaber_female
ENSXCOG00000018245	tsen54	99	43.222	ENSHGLG00100005497	TSEN54	97	42.829	Heterocephalus_glaber_male
ENSXCOG00000018245	tsen54	100	61.259	ENSHCOG00000007481	tsen54	100	62.228	Hippocampus_comes
ENSXCOG00000018245	tsen54	99	50.410	ENSIPUG00000000590	tsen54	96	50.205	Ictalurus_punctatus
ENSXCOG00000018245	tsen54	99	42.998	ENSSTOG00000012883	TSEN54	97	42.998	Ictidomys_tridecemlineatus
ENSXCOG00000018245	tsen54	99	43.529	ENSJJAG00000007365	Tsen54	97	43.529	Jaculus_jaculus
ENSXCOG00000018245	tsen54	100	64.203	ENSKMAG00000006944	tsen54	97	61.404	Kryptolebias_marmoratus
ENSXCOG00000018245	tsen54	100	60.941	ENSLBEG00000004199	tsen54	97	57.708	Labrus_bergylta
ENSXCOG00000018245	tsen54	86	56.173	ENSLACG00000009497	TSEN54	76	56.173	Latimeria_chalumnae
ENSXCOG00000018245	tsen54	99	50.000	ENSLOCG00000011191	tsen54	96	51.262	Lepisosteus_oculatus
ENSXCOG00000018245	tsen54	99	41.822	ENSLAFG00000011655	TSEN54	92	43.210	Loxodonta_africana
ENSXCOG00000018245	tsen54	87	61.250	ENSMFAG00000000712	TSEN54	96	42.510	Macaca_fascicularis
ENSXCOG00000018245	tsen54	87	61.250	ENSMNEG00000029199	TSEN54	96	42.510	Macaca_nemestrina
ENSXCOG00000018245	tsen54	99	41.667	ENSMLEG00000044168	TSEN54	82	43.478	Mandrillus_leucophaeus
ENSXCOG00000018245	tsen54	100	64.833	ENSMAMG00000019773	tsen54	97	62.424	Mastacembelus_armatus
ENSXCOG00000018245	tsen54	100	63.309	ENSMZEG00005000884	tsen54	97	60.643	Maylandia_zebra
ENSXCOG00000018245	tsen54	84	60.140	ENSMGAG00000009556	TSEN54	72	57.516	Meleagris_gallopavo
ENSXCOG00000018245	tsen54	99	44.401	ENSMAUG00000016838	Tsen54	97	44.401	Mesocricetus_auratus
ENSXCOG00000018245	tsen54	99	45.070	ENSMICG00000044012	TSEN54	96	44.869	Microcebus_murinus
ENSXCOG00000018245	tsen54	99	44.316	ENSMOCG00000021585	Tsen54	97	36.381	Microtus_ochrogaster
ENSXCOG00000018245	tsen54	99	65.443	ENSMMOG00000020189	tsen54	99	65.302	Mola_mola
ENSXCOG00000018245	tsen54	85	59.494	ENSMODG00000007438	TSEN54	71	59.494	Monodelphis_domestica
ENSXCOG00000018245	tsen54	99	64.085	ENSMALG00000020573	tsen54	97	61.265	Monopterus_albus
ENSXCOG00000018245	tsen54	99	43.026	MGP_CAROLIEiJ_G0017417	Tsen54	97	43.026	Mus_caroli
ENSXCOG00000018245	tsen54	99	43.222	ENSMUSG00000020781	Tsen54	97	43.222	Mus_musculus
ENSXCOG00000018245	tsen54	99	43.026	MGP_PahariEiJ_G0018547	Tsen54	97	42.436	Mus_pahari
ENSXCOG00000018245	tsen54	99	43.222	MGP_SPRETEiJ_G0018262	Tsen54	97	43.222	Mus_spretus
ENSXCOG00000018245	tsen54	84	63.399	ENSMPUG00000013870	TSEN54	96	36.311	Mustela_putorius_furo
ENSXCOG00000018245	tsen54	99	43.086	ENSMLUG00000015298	TSEN54	96	43.400	Myotis_lucifugus
ENSXCOG00000018245	tsen54	99	43.539	ENSNGAG00000015673	Tsen54	97	43.539	Nannospalax_galili
ENSXCOG00000018245	tsen54	99	37.215	ENSMEUG00000011908	TSEN54	99	38.901	Notamacropus_eugenii
ENSXCOG00000018245	tsen54	82	56.429	ENSOPRG00000012513	TSEN54	73	56.429	Ochotona_princeps
ENSXCOG00000018245	tsen54	100	61.538	ENSONIG00000009543	tsen54	97	60.161	Oreochromis_niloticus
ENSXCOG00000018245	tsen54	99	40.388	ENSOCUG00000009875	TSEN54	97	40.000	Oryctolagus_cuniculus
ENSXCOG00000018245	tsen54	99	61.916	ENSORLG00000000852	tsen54	97	60.248	Oryzias_latipes
ENSXCOG00000018245	tsen54	99	62.408	ENSORLG00020018221	tsen54	97	60.455	Oryzias_latipes_hni
ENSXCOG00000018245	tsen54	99	62.162	ENSORLG00015009413	tsen54	98	60.663	Oryzias_latipes_hsok
ENSXCOG00000018245	tsen54	100	62.745	ENSOMEG00000014402	tsen54	94	60.707	Oryzias_melastigma
ENSXCOG00000018245	tsen54	99	42.376	ENSOGAG00000001442	TSEN54	97	42.574	Otolemur_garnettii
ENSXCOG00000018245	tsen54	99	41.935	ENSOARG00000010361	TSEN54	99	41.009	Ovis_aries
ENSXCOG00000018245	tsen54	84	61.224	ENSPPAG00000043519	TSEN54	99	43.750	Pan_paniscus
ENSXCOG00000018245	tsen54	99	43.155	ENSPPRG00000009162	TSEN54	97	38.566	Panthera_pardus
ENSXCOG00000018245	tsen54	99	43.023	ENSPTIG00000019312	TSEN54	96	43.046	Panthera_tigris_altaica
ENSXCOG00000018245	tsen54	87	60.625	ENSPTRG00000009646	TSEN54	97	36.852	Pan_troglodytes
ENSXCOG00000018245	tsen54	95	61.250	ENSPANG00000020133	TSEN54	96	44.668	Papio_anubis
ENSXCOG00000018245	tsen54	99	51.675	ENSPKIG00000023018	tsen54	99	51.914	Paramormyrops_kingsleyae
ENSXCOG00000018245	tsen54	81	69.863	ENSPSIG00000012807	TSEN54	100	42.506	Pelodiscus_sinensis
ENSXCOG00000018245	tsen54	95	51.416	ENSPMGG00000019578	tsen54	100	51.198	Periophthalmus_magnuspinnatus
ENSXCOG00000018245	tsen54	99	41.815	ENSPEMG00000014857	Tsen54	97	41.617	Peromyscus_maniculatus_bairdii
ENSXCOG00000018245	tsen54	100	87.654	ENSPFOG00000022740	tsen54	97	83.264	Poecilia_formosa
ENSXCOG00000018245	tsen54	100	88.366	ENSPLAG00000014847	tsen54	97	84.200	Poecilia_latipinna
ENSXCOG00000018245	tsen54	100	88.642	ENSPMEG00000022876	tsen54	97	84.200	Poecilia_mexicana
ENSXCOG00000018245	tsen54	100	87.901	ENSPREG00000013090	tsen54	97	84.134	Poecilia_reticulata
ENSXCOG00000018245	tsen54	99	43.032	ENSPPYG00000008629	TSEN54	99	44.719	Pongo_abelii
ENSXCOG00000018245	tsen54	93	40.417	ENSPCAG00000002093	TSEN54	95	40.748	Procavia_capensis
ENSXCOG00000018245	tsen54	85	62.025	ENSPCOG00000027880	TSEN54	97	35.893	Propithecus_coquereli
ENSXCOG00000018245	tsen54	99	44.394	ENSPVAG00000008446	TSEN54	97	37.765	Pteropus_vampyrus
ENSXCOG00000018245	tsen54	100	64.407	ENSPNYG00000010217	tsen54	100	64.407	Pundamilia_nyererei
ENSXCOG00000018245	tsen54	99	52.235	ENSPNAG00000003770	tsen54	97	44.336	Pygocentrus_nattereri
ENSXCOG00000018245	tsen54	99	43.418	ENSRNOG00000004598	Tsen54	97	43.640	Rattus_norvegicus
ENSXCOG00000018245	tsen54	87	61.250	ENSRBIG00000043040	TSEN54	97	36.154	Rhinopithecus_bieti
ENSXCOG00000018245	tsen54	87	61.250	ENSRROG00000030797	TSEN54	97	36.154	Rhinopithecus_roxellana
ENSXCOG00000018245	tsen54	99	43.838	ENSSBOG00000013543	TSEN54	96	42.886	Saimiri_boliviensis_boliviensis
ENSXCOG00000018245	tsen54	99	41.954	ENSSHAG00000018127	TSEN54	96	41.954	Sarcophilus_harrisii
ENSXCOG00000018245	tsen54	99	51.422	ENSSFOG00015004093	tsen54	99	51.185	Scleropages_formosus
ENSXCOG00000018245	tsen54	99	61.827	ENSSMAG00000012449	tsen54	97	62.529	Scophthalmus_maximus
ENSXCOG00000018245	tsen54	100	66.588	ENSSDUG00000021506	tsen54	97	62.648	Seriola_dumerili
ENSXCOG00000018245	tsen54	100	66.824	ENSSLDG00000016303	tsen54	97	62.451	Seriola_lalandi_dorsalis
ENSXCOG00000018245	tsen54	70	59.873	ENSSPUG00000008988	TSEN54	68	59.873	Sphenodon_punctatus
ENSXCOG00000018245	tsen54	100	65.700	ENSSPAG00000008098	-	99	64.103	Stegastes_partitus
ENSXCOG00000018245	tsen54	100	61.836	ENSSPAG00000008047	tsen54	100	62.532	Stegastes_partitus
ENSXCOG00000018245	tsen54	99	43.385	ENSSSCG00000036852	TSEN54	97	43.689	Sus_scrofa
ENSXCOG00000018245	tsen54	99	42.361	ENSTGUG00000008548	TSEN54	77	66.000	Taeniopygia_guttata
ENSXCOG00000018245	tsen54	99	63.537	ENSTRUG00000004230	tsen54	97	63.100	Takifugu_rubripes
ENSXCOG00000018245	tsen54	100	58.852	ENSTNIG00000011281	tsen54	98	59.118	Tetraodon_nigroviridis
ENSXCOG00000018245	tsen54	99	41.514	ENSTTRG00000015828	TSEN54	94	41.876	Tursiops_truncatus
ENSXCOG00000018245	tsen54	99	42.627	ENSUAMG00000010045	TSEN54	99	42.396	Ursus_americanus
ENSXCOG00000018245	tsen54	99	41.339	ENSUMAG00000008979	TSEN54	99	42.396	Ursus_maritimus
ENSXCOG00000018245	tsen54	99	44.444	ENSVVUG00000011411	TSEN54	97	44.618	Vulpes_vulpes
ENSXCOG00000018245	tsen54	100	42.206	ENSXETG00000012532	tsen54	99	60.000	Xenopus_tropicalis
ENSXCOG00000018245	tsen54	100	92.822	ENSXMAG00000018818	tsen54	97	87.734	Xiphophorus_maculatus