EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000018262 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding fox-1 homolog 3b
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
137659 bases
Position
chrKQ557208.1:23319383-23457041
Accession
ZDB-GENE-091204-46
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000024459Fox-1_CPF12414.81.8e-3711
ENSXCOP00000024461Fox-1_CPF12414.82.4e-2411
ENSXCOP00000024461RRM_1PF00076.229.1e-1911
ENSXCOP00000024459RRM_1PF00076.221.2e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000024755-882-ENSXCOP00000024461294 (aa)--
ENSXCOT00000024753-1071-ENSXCOP00000024459357 (aa)--
Gene Model
Click here to download ENSXCOG00000018262's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018262's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000018262rbfox3b7555.556ENSXCOG00000015905-9248.071
ENSXCOG00000018262rbfox3b5459.043ENSXCOG00000013643rbfox29260.638
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000018262rbfox3b9574.247ENSG00000167281RBFOX310081.270Homo_sapiens
ENSXCOG00000018262rbfox3b9774.306ENSAPOG00000015658-7880.769Acanthochromis_polyacanthus
ENSXCOG00000018262rbfox3b10098.061ENSAPOG00000021630rbfox3b9498.061Acanthochromis_polyacanthus
ENSXCOG00000018262rbfox3b9175.645ENSAMEG00000014170RBFOX38876.437Ailuropoda_melanoleuca
ENSXCOG00000018262rbfox3b10098.653ENSACIG00000010817rbfox3b9998.653Amphilophus_citrinellus
ENSXCOG00000018262rbfox3b9571.383ENSACIG00000003768-9070.859Amphilophus_citrinellus
ENSXCOG00000018262rbfox3b10098.061ENSAOCG00000012358rbfox3b9898.061Amphiprion_ocellaris
ENSXCOG00000018262rbfox3b9683.275ENSAOCG00000010786-9475.000Amphiprion_ocellaris
ENSXCOG00000018262rbfox3b10092.256ENSAPEG00000019081rbfox3b9681.058Amphiprion_percula
ENSXCOG00000018262rbfox3b9577.451ENSAPEG00000015891-8774.716Amphiprion_percula
ENSXCOG00000018262rbfox3b9674.834ENSATEG00000023101-9677.215Anabas_testudineus
ENSXCOG00000018262rbfox3b10085.924ENSATEG00000019945rbfox3b9988.338Anabas_testudineus
ENSXCOG00000018262rbfox3b10076.115ENSACAG00000016093RBFOX39975.691Anolis_carolinensis
ENSXCOG00000018262rbfox3b8588.462ENSANAG00000023457RBFOX310080.952Aotus_nancymaae
ENSXCOG00000018262rbfox3b10097.238ENSACLG00000020011rbfox3b10096.815Astatotilapia_calliptera
ENSXCOG00000018262rbfox3b10077.636ENSACLG00000025552-9776.731Astatotilapia_calliptera
ENSXCOG00000018262rbfox3b10083.924ENSAMXG00000037246rbfox3a9884.242Astyanax_mexicanus
ENSXCOG00000018262rbfox3b10082.637ENSAMXG00000042841rbfox3b9484.802Astyanax_mexicanus
ENSXCOG00000018262rbfox3b8079.916ENSBTAG00000006280RBFOX310062.431Bos_taurus
ENSXCOG00000018262rbfox3b9578.947ENSCJAG00000009563RBFOX39280.602Callithrix_jacchus
ENSXCOG00000018262rbfox3b7577.406ENSCAFG00000005547RBFOX38585.417Canis_familiaris
ENSXCOG00000018262rbfox3b8588.462ENSCAFG00020008126RBFOX39670.442Canis_lupus_dingo
ENSXCOG00000018262rbfox3b7779.039ENSCHIG00000009124RBFOX39670.442Capra_hircus
ENSXCOG00000018262rbfox3b8592.000ENSTSYG00000029617RBFOX310071.074Carlito_syrichta
ENSXCOG00000018262rbfox3b5375.796ENSCAPG00000010217RBFOX310077.193Cavia_aperea
ENSXCOG00000018262rbfox3b9564.571ENSCPOG00000021703RBFOX310069.863Cavia_porcellus
ENSXCOG00000018262rbfox3b9088.462ENSCCAG00000028450RBFOX310080.952Cebus_capucinus
ENSXCOG00000018262rbfox3b9579.298ENSCATG00000018349RBFOX310081.270Cercocebus_atys
ENSXCOG00000018262rbfox3b9564.943ENSCLAG00000006449RBFOX310070.248Chinchilla_lanigera
ENSXCOG00000018262rbfox3b9574.247ENSCSAG00000002355RBFOX310081.270Chlorocebus_sabaeus
ENSXCOG00000018262rbfox3b9577.778ENSCPBG00000010904RBFOX310082.166Chrysemys_picta_bellii
ENSXCOG00000018262rbfox3b8588.462ENSCANG00000043120RBFOX310081.270Colobus_angolensis_palliatus
ENSXCOG00000018262rbfox3b8584.000ENSCGRG00001019476Rbfox310070.330Cricetulus_griseus_chok1gshd
ENSXCOG00000018262rbfox3b8584.000ENSCGRG00000003268Rbfox310070.330Cricetulus_griseus_crigri
ENSXCOG00000018262rbfox3b10072.524ENSCSEG00000020606RBFOX39768.436Cynoglossus_semilaevis
ENSXCOG00000018262rbfox3b10083.946ENSCSEG00000015567RBFOX39680.663Cynoglossus_semilaevis
ENSXCOG00000018262rbfox3b10098.061ENSCVAG00000006882rbfox3b9898.061Cyprinodon_variegatus
ENSXCOG00000018262rbfox3b10083.924ENSDARG00000010083rbfox3a9984.848Danio_rerio
ENSXCOG00000018262rbfox3b10081.544ENSDARG00000074310rbfox3b9580.872Danio_rerio
ENSXCOG00000018262rbfox3b8260.458ENSDNOG00000039391RBFOX37782.609Dasypus_novemcinctus
ENSXCOG00000018262rbfox3b9558.892ENSDORG00000005352Rbfox38084.444Dipodomys_ordii
ENSXCOG00000018262rbfox3b10062.385ENSEBUG00000002129RBFOX39567.941Eptatretus_burgeri
ENSXCOG00000018262rbfox3b8556.107ENSEBUG00000013559RBFOX38852.063Eptatretus_burgeri
ENSXCOG00000018262rbfox3b9574.086ENSEASG00005005059RBFOX310080.757Equus_asinus_asinus
ENSXCOG00000018262rbfox3b9573.754ENSECAG00000023811RBFOX310080.442Equus_caballus
ENSXCOG00000018262rbfox3b8076.596ENSEEUG00000013974RBFOX37285.246Erinaceus_europaeus
ENSXCOG00000018262rbfox3b6563.590ENSELUG00000009807-6257.407Esox_lucius
ENSXCOG00000018262rbfox3b10093.352ENSELUG00000017963rbfox3b9893.352Esox_lucius
ENSXCOG00000018262rbfox3b9178.614ENSFCAG00000002555RBFOX310080.317Felis_catus
ENSXCOG00000018262rbfox3b9266.849ENSFALG00000012288RBFOX38967.857Ficedula_albicollis
ENSXCOG00000018262rbfox3b9559.770ENSFDAG00000007489RBFOX310065.289Fukomys_damarensis
ENSXCOG00000018262rbfox3b10084.244ENSFHEG00000008550rbfox3b10088.179Fundulus_heteroclitus
ENSXCOG00000018262rbfox3b10091.111ENSGMOG00000019304-7791.111Gadus_morhua
ENSXCOG00000018262rbfox3b9976.454ENSGALG00000032889RBFOX39977.222Gallus_gallus
ENSXCOG00000018262rbfox3b10092.593ENSGAFG00000005025rbfox3b9893.539Gambusia_affinis
ENSXCOG00000018262rbfox3b9585.106ENSGACG00000002138-9670.685Gasterosteus_aculeatus
ENSXCOG00000018262rbfox3b9976.389ENSGAGG00000020025RBFOX310082.166Gopherus_agassizii
ENSXCOG00000018262rbfox3b9579.298ENSGGOG00000012546RBFOX310081.270Gorilla_gorilla
ENSXCOG00000018262rbfox3b10097.507ENSHBUG00000018099rbfox3b9897.507Haplochromis_burtoni
ENSXCOG00000018262rbfox3b10077.316ENSHBUG00000023098-9581.381Haplochromis_burtoni
ENSXCOG00000018262rbfox3b9563.636ENSHGLG00000008679RBFOX310068.937Heterocephalus_glaber_female
ENSXCOG00000018262rbfox3b9560.795ENSHGLG00100014739RBFOX38775.665Heterocephalus_glaber_male
ENSXCOG00000018262rbfox3b10076.923ENSHCOG00000001863RBFOX39277.926Hippocampus_comes
ENSXCOG00000018262rbfox3b9979.167ENSHCOG00000007444RBFOX39380.548Hippocampus_comes
ENSXCOG00000018262rbfox3b10082.289ENSIPUG00000012010rbfox3a9883.333Ictalurus_punctatus
ENSXCOG00000018262rbfox3b10072.866ENSIPUG00000021966rbfox3b9784.848Ictalurus_punctatus
ENSXCOG00000018262rbfox3b9562.284ENSSTOG00000026817RBFOX310067.197Ictidomys_tridecemlineatus
ENSXCOG00000018262rbfox3b8588.462ENSJJAG00000014167Rbfox310070.442Jaculus_jaculus
ENSXCOG00000018262rbfox3b10098.061ENSKMAG00000006726rbfox3b9898.061Kryptolebias_marmoratus
ENSXCOG00000018262rbfox3b10084.298ENSLBEG00000022508-9779.501Labrus_bergylta
ENSXCOG00000018262rbfox3b10098.316ENSLBEG00000004030rbfox3b9998.316Labrus_bergylta
ENSXCOG00000018262rbfox3b9567.278ENSLACG00000018409-9071.910Latimeria_chalumnae
ENSXCOG00000018262rbfox3b9088.073ENSLOCG00000012267rbfox3a9888.379Lepisosteus_oculatus
ENSXCOG00000018262rbfox3b8592.000ENSLAFG00000016623RBFOX39670.718Loxodonta_africana
ENSXCOG00000018262rbfox3b9565.455ENSMFAG00000002247RBFOX310070.994Macaca_fascicularis
ENSXCOG00000018262rbfox3b9574.247ENSMMUG00000023028RBFOX310081.270Macaca_mulatta
ENSXCOG00000018262rbfox3b9573.913ENSMNEG00000041147RBFOX310080.952Macaca_nemestrina
ENSXCOG00000018262rbfox3b9574.247ENSMLEG00000025686RBFOX310081.270Mandrillus_leucophaeus
ENSXCOG00000018262rbfox3b10091.582ENSMAMG00000019810rbfox3b9990.572Mastacembelus_armatus
ENSXCOG00000018262rbfox3b9579.932ENSMAMG00000020600-9379.385Mastacembelus_armatus
ENSXCOG00000018262rbfox3b8866.436ENSMZEG00005003055-6877.301Maylandia_zebra
ENSXCOG00000018262rbfox3b10097.507ENSMZEG00005000781rbfox3b9497.507Maylandia_zebra
ENSXCOG00000018262rbfox3b6780.303ENSMGAG00000005600RBFOX38479.464Meleagris_gallopavo
ENSXCOG00000018262rbfox3b9564.553ENSMAUG00000013543Rbfox310068.956Mesocricetus_auratus
ENSXCOG00000018262rbfox3b10076.358ENSMICG00000014898RBFOX310080.255Microcebus_murinus
ENSXCOG00000018262rbfox3b8584.000ENSMOCG00000015373Rbfox310069.421Microtus_ochrogaster
ENSXCOG00000018262rbfox3b9998.324ENSMMOG00000020193rbfox3b9898.324Mola_mola
ENSXCOG00000018262rbfox3b9179.456ENSMODG00000002089RBFOX39280.303Monodelphis_domestica
ENSXCOG00000018262rbfox3b10096.399ENSMALG00000020407rbfox3b9896.399Monopterus_albus
ENSXCOG00000018262rbfox3b10082.333ENSMALG00000018270-9683.333Monopterus_albus
ENSXCOG00000018262rbfox3b8584.000MGP_CAROLIEiJ_G0017487Rbfox310080.063Mus_caroli
ENSXCOG00000018262rbfox3b9574.667ENSMUSG00000025576Rbfox310079.811Mus_musculus
ENSXCOG00000018262rbfox3b8588.000MGP_PahariEiJ_G0018614Rbfox310080.442Mus_pahari
ENSXCOG00000018262rbfox3b8588.000MGP_SPRETEiJ_G0018331Rbfox310080.380Mus_spretus
ENSXCOG00000018262rbfox3b9171.467ENSMPUG00000012319RBFOX39572.207Mustela_putorius_furo
ENSXCOG00000018262rbfox3b8588.000ENSNGAG00000018006Rbfox310070.523Nannospalax_galili
ENSXCOG00000018262rbfox3b10079.125ENSNBRG00000022885-9175.000Neolamprologus_brichardi
ENSXCOG00000018262rbfox3b10098.599ENSNBRG00000010102rbfox3b9898.599Neolamprologus_brichardi
ENSXCOG00000018262rbfox3b10057.947ENSNLEG00000000153-9558.140Nomascus_leucogenys
ENSXCOG00000018262rbfox3b9582.609ENSMEUG00000004218-8382.609Notamacropus_eugenii
ENSXCOG00000018262rbfox3b7076.562ENSOPRG00000016279-7180.000Ochotona_princeps
ENSXCOG00000018262rbfox3b9576.000ENSODEG00000009433RBFOX310080.696Octodon_degus
ENSXCOG00000018262rbfox3b10077.636ENSONIG00000007282-9980.000Oreochromis_niloticus
ENSXCOG00000018262rbfox3b10098.338ENSONIG00000009549rbfox3b9898.338Oreochromis_niloticus
ENSXCOG00000018262rbfox3b7159.468ENSOCUG00000014217RBFOX35082.609Oryctolagus_cuniculus
ENSXCOG00000018262rbfox3b10097.230ENSORLG00000000905rbfox3b7789.444Oryzias_latipes
ENSXCOG00000018262rbfox3b10097.230ENSORLG00020018030rbfox3b9892.857Oryzias_latipes_hni
ENSXCOG00000018262rbfox3b10097.507ENSORLG00015009200rbfox3b9897.507Oryzias_latipes_hsok
ENSXCOG00000018262rbfox3b8690.775ENSOMEG00000014677rbfox3b8392.453Oryzias_melastigma
ENSXCOG00000018262rbfox3b9574.161ENSOGAG00000029595RBFOX38680.615Otolemur_garnettii
ENSXCOG00000018262rbfox3b8959.312ENSOARG00000002908RBFOX38958.807Ovis_aries
ENSXCOG00000018262rbfox3b7779.825ENSPPAG00000025383RBFOX39980.556Pan_paniscus
ENSXCOG00000018262rbfox3b9563.717ENSPPRG00000007819RBFOX310071.067Panthera_pardus
ENSXCOG00000018262rbfox3b8588.462ENSPTRG00000009727RBFOX310081.270Pan_troglodytes
ENSXCOG00000018262rbfox3b9574.247ENSPANG00000019837RBFOX310081.270Papio_anubis
ENSXCOG00000018262rbfox3b10087.363ENSPKIG00000010299rbfox3a9787.798Paramormyrops_kingsleyae
ENSXCOG00000018262rbfox3b10066.454ENSPKIG00000022633-9068.769Paramormyrops_kingsleyae
ENSXCOG00000018262rbfox3b8691.765ENSPMGG00000008000rbfox3b9783.974Periophthalmus_magnuspinnatus
ENSXCOG00000018262rbfox3b8584.000ENSPEMG00000010500Rbfox310069.972Peromyscus_maniculatus_bairdii
ENSXCOG00000018262rbfox3b5362.963ENSPMAG00000008689rbfox3b9374.869Petromyzon_marinus
ENSXCOG00000018262rbfox3b9566.221ENSPCIG00000005766RBFOX310071.975Phascolarctos_cinereus
ENSXCOG00000018262rbfox3b10098.061ENSPFOG00000018294rbfox3b9498.061Poecilia_formosa
ENSXCOG00000018262rbfox3b7598.661ENSPLAG00000000481rbfox3b7398.655Poecilia_latipinna
ENSXCOG00000018262rbfox3b10083.923ENSPMEG00000022997rbfox3b10087.859Poecilia_mexicana
ENSXCOG00000018262rbfox3b10098.066ENSPREG00000012886rbfox3b9798.066Poecilia_reticulata
ENSXCOG00000018262rbfox3b8073.840ENSPPYG00000008704RBFOX38775.338Pongo_abelii
ENSXCOG00000018262rbfox3b8584.000ENSPCAG00000001401RBFOX310064.088Procavia_capensis
ENSXCOG00000018262rbfox3b9088.462ENSPCOG00000012689RBFOX310070.166Propithecus_coquereli
ENSXCOG00000018262rbfox3b9584.000ENSPVAG00000015243RBFOX39275.000Pteropus_vampyrus
ENSXCOG00000018262rbfox3b10086.913ENSPNYG00000010414rbfox3b9677.095Pundamilia_nyererei
ENSXCOG00000018262rbfox3b10080.135ENSPNYG00000009079-9375.967Pundamilia_nyererei
ENSXCOG00000018262rbfox3b10072.727ENSPNAG00000018173rbfox3b9072.727Pygocentrus_nattereri
ENSXCOG00000018262rbfox3b10084.196ENSPNAG00000002889rbfox3a9784.741Pygocentrus_nattereri
ENSXCOG00000018262rbfox3b8584.615ENSRNOG00000003386Rbfox310080.442Rattus_norvegicus
ENSXCOG00000018262rbfox3b9579.298ENSRBIG00000040449RBFOX39279.758Rhinopithecus_bieti
ENSXCOG00000018262rbfox3b9574.247ENSRROG00000000766RBFOX310081.270Rhinopithecus_roxellana
ENSXCOG00000018262rbfox3b9578.947ENSSBOG00000031591RBFOX310080.952Saimiri_boliviensis_boliviensis
ENSXCOG00000018262rbfox3b9569.091ENSSHAG00000016076RBFOX310071.975Sarcophilus_harrisii
ENSXCOG00000018262rbfox3b9968.975ENSSFOG00015004716RBFOX39968.219Scleropages_formosus
ENSXCOG00000018262rbfox3b10086.813ENSSFOG00015023260rbfox3a9787.088Scleropages_formosus
ENSXCOG00000018262rbfox3b10093.651ENSSMAG00000012618rbfox3b8593.651Scophthalmus_maximus
ENSXCOG00000018262rbfox3b10078.594ENSSMAG00000019052-10081.587Scophthalmus_maximus
ENSXCOG00000018262rbfox3b9976.880ENSSDUG00000015801-9677.716Seriola_dumerili
ENSXCOG00000018262rbfox3b10084.244ENSSDUG00000023183rbfox3b10088.179Seriola_dumerili
ENSXCOG00000018262rbfox3b9683.624ENSSLDG00000016098-9681.058Seriola_lalandi_dorsalis
ENSXCOG00000018262rbfox3b10098.338ENSSLDG00000000149rbfox3b9898.338Seriola_lalandi_dorsalis
ENSXCOG00000018262rbfox3b9577.667ENSSPUG00000011733RBFOX39982.166Sphenodon_punctatus
ENSXCOG00000018262rbfox3b10093.559ENSSPAG00000017571rbfox3b9682.913Stegastes_partitus
ENSXCOG00000018262rbfox3b8672.325ENSSPAG00000004898-8577.003Stegastes_partitus
ENSXCOG00000018262rbfox3b7688.462ENSSSCG00000039498RBFOX39669.279Sus_scrofa
ENSXCOG00000018262rbfox3b10084.112ENSTRUG00000004894rbfox3b9388.024Takifugu_rubripes
ENSXCOG00000018262rbfox3b10083.382ENSTNIG00000011278rbfox3b8987.360Tetraodon_nigroviridis
ENSXCOG00000018262rbfox3b8172.903ENSTBEG00000004296-8950.904Tupaia_belangeri
ENSXCOG00000018262rbfox3b7771.491ENSTTRG00000003676RBFOX38382.609Tursiops_truncatus
ENSXCOG00000018262rbfox3b9574.247ENSUAMG00000004668RBFOX310081.270Ursus_americanus
ENSXCOG00000018262rbfox3b9179.217ENSVVUG00000017864RBFOX310080.952Vulpes_vulpes
ENSXCOG00000018262rbfox3b10062.985ENSXETG00000020236rbfox38866.954Xenopus_tropicalis
ENSXCOG00000018262rbfox3b10098.338ENSXMAG00000012939rbfox3b9898.338Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us