EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018295 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 21480 bases
Position: chrKQ557222.1:4751676-4773155
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024499	TUDOR	PF00567.24	3.5e-74	1	4
ENSXCOP00000024499	TUDOR	PF00567.24	3.5e-74	2	4
ENSXCOP00000024499	TUDOR	PF00567.24	3.5e-74	3	4
ENSXCOP00000024499	TUDOR	PF00567.24	3.5e-74	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024793	-	4110	-	ENSXCOP00000024499	1369 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018295	rnf17	97	31.219	ENSG00000132972	RNF17	99	34.606	Homo_sapiens
ENSXCOG00000018295	rnf17	99	61.302	ENSAPOG00000017034	rnf17	97	60.967	Acanthochromis_polyacanthus
ENSXCOG00000018295	rnf17	98	30.159	ENSAMEG00000017340	RNF17	87	30.159	Ailuropoda_melanoleuca
ENSXCOG00000018295	rnf17	99	62.253	ENSAOCG00000018283	rnf17	90	61.449	Amphiprion_ocellaris
ENSXCOG00000018295	rnf17	99	55.741	ENSAPEG00000022338	rnf17	85	62.476	Amphiprion_percula
ENSXCOG00000018295	rnf17	99	62.720	ENSATEG00000002067	rnf17	100	61.945	Anabas_testudineus
ENSXCOG00000018295	rnf17	76	34.324	ENSAPLG00000003969	RNF17	92	31.481	Anas_platyrhynchos
ENSXCOG00000018295	rnf17	96	31.152	ENSACAG00000001418	RNF17	68	33.813	Anolis_carolinensis
ENSXCOG00000018295	rnf17	76	30.528	ENSANAG00000029969	RNF17	69	30.360	Aotus_nancymaae
ENSXCOG00000018295	rnf17	99	61.100	ENSACLG00000018279	rnf17	90	60.095	Astatotilapia_calliptera
ENSXCOG00000018295	rnf17	88	47.919	ENSAMXG00000011002	rnf17	92	47.996	Astyanax_mexicanus
ENSXCOG00000018295	rnf17	54	33.932	ENSBTAG00000000278	RNF17	87	35.000	Bos_taurus
ENSXCOG00000018295	rnf17	77	34.067	ENSCJAG00000018937	RNF17	84	34.039	Callithrix_jacchus
ENSXCOG00000018295	rnf17	98	30.715	ENSCAFG00000007418	RNF17	78	33.116	Canis_familiaris
ENSXCOG00000018295	rnf17	54	33.213	ENSCAFG00020002919	-	86	33.750	Canis_lupus_dingo
ENSXCOG00000018295	rnf17	76	34.467	ENSCHIG00000026716	RNF17	87	35.000	Capra_hircus
ENSXCOG00000018295	rnf17	54	33.454	ENSTSYG00000000365	RNF17	82	33.454	Carlito_syrichta
ENSXCOG00000018295	rnf17	77	33.803	ENSCCAG00000026725	RNF17	84	33.392	Cebus_capucinus
ENSXCOG00000018295	rnf17	96	31.250	ENSCATG00000040352	RNF17	83	33.932	Cercocebus_atys
ENSXCOG00000018295	rnf17	76	34.050	ENSCLAG00000004127	RNF17	87	30.330	Chinchilla_lanigera
ENSXCOG00000018295	rnf17	99	30.759	ENSCSAG00000018019	RNF17	87	30.753	Chlorocebus_sabaeus
ENSXCOG00000018295	rnf17	97	32.135	ENSCPBG00000020920	RNF17	91	31.972	Chrysemys_picta_bellii
ENSXCOG00000018295	rnf17	96	31.064	ENSCANG00000032927	RNF17	83	34.470	Colobus_angolensis_palliatus
ENSXCOG00000018295	rnf17	87	33.773	ENSCGRG00001022658	Rnf17	87	30.648	Cricetulus_griseus_chok1gshd
ENSXCOG00000018295	rnf17	87	33.773	ENSCGRG00000009924	Rnf17	87	30.648	Cricetulus_griseus_crigri
ENSXCOG00000018295	rnf17	95	55.292	ENSCSEG00000008626	rnf17	97	54.808	Cynoglossus_semilaevis
ENSXCOG00000018295	rnf17	93	70.058	ENSCVAG00000017008	rnf17	100	70.058	Cyprinodon_variegatus
ENSXCOG00000018295	rnf17	99	42.321	ENSDARG00000056387	rnf17	91	41.904	Danio_rerio
ENSXCOG00000018295	rnf17	54	30.909	ENSEBUG00000016781	-	92	30.645	Eptatretus_burgeri
ENSXCOG00000018295	rnf17	54	32.616	ENSEASG00005001421	-	86	33.750	Equus_asinus_asinus
ENSXCOG00000018295	rnf17	76	34.016	ENSECAG00000017152	RNF17	85	30.007	Equus_caballus
ENSXCOG00000018295	rnf17	65	33.766	ENSEEUG00000000332	RNF17	64	33.036	Erinaceus_europaeus
ENSXCOG00000018295	rnf17	99	47.039	ENSELUG00000005626	rnf17	91	46.390	Esox_lucius
ENSXCOG00000018295	rnf17	76	34.164	ENSFCAG00000004914	RNF17	87	33.750	Felis_catus
ENSXCOG00000018295	rnf17	77	33.364	ENSFALG00000008766	RNF17	72	33.242	Ficedula_albicollis
ENSXCOG00000018295	rnf17	76	33.215	ENSFDAG00000017857	RNF17	85	30.284	Fukomys_damarensis
ENSXCOG00000018295	rnf17	99	67.948	ENSFHEG00000014822	rnf17	90	67.467	Fundulus_heteroclitus
ENSXCOG00000018295	rnf17	88	78.467	ENSGAFG00000004463	rnf17	90	78.467	Gambusia_affinis
ENSXCOG00000018295	rnf17	93	30.676	ENSGAGG00000016999	RNF17	90	30.829	Gopherus_agassizii
ENSXCOG00000018295	rnf17	98	31.254	ENSGGOG00000014491	RNF17	84	34.392	Gorilla_gorilla
ENSXCOG00000018295	rnf17	99	61.168	ENSHBUG00000003554	rnf17	90	60.163	Haplochromis_burtoni
ENSXCOG00000018295	rnf17	76	33.244	ENSHGLG00000007270	RNF17	86	30.068	Heterocephalus_glaber_female
ENSXCOG00000018295	rnf17	76	33.156	ENSHGLG00100017393	RNF17	86	30.000	Heterocephalus_glaber_male
ENSXCOG00000018295	rnf17	90	48.826	ENSHCOG00000017676	rnf17	90	48.187	Hippocampus_comes
ENSXCOG00000018295	rnf17	90	50.374	ENSIPUG00000001087	rnf17	87	49.953	Ictalurus_punctatus
ENSXCOG00000018295	rnf17	51	32.150	ENSSTOG00000011255	-	78	32.544	Ictidomys_tridecemlineatus
ENSXCOG00000018295	rnf17	76	33.989	ENSJJAG00000016584	Rnf17	85	30.546	Jaculus_jaculus
ENSXCOG00000018295	rnf17	99	62.560	ENSKMAG00000013403	rnf17	90	61.947	Kryptolebias_marmoratus
ENSXCOG00000018295	rnf17	99	57.976	ENSLBEG00000014910	rnf17	97	57.554	Labrus_bergylta
ENSXCOG00000018295	rnf17	78	32.982	ENSLACG00000000323	RNF17	97	32.837	Latimeria_chalumnae
ENSXCOG00000018295	rnf17	98	35.338	ENSLOCG00000010768	rnf17	89	34.836	Lepisosteus_oculatus
ENSXCOG00000018295	rnf17	96	31.277	ENSMFAG00000032388	RNF17	83	33.932	Macaca_fascicularis
ENSXCOG00000018295	rnf17	96	31.277	ENSMMUG00000014610	RNF17	83	33.932	Macaca_mulatta
ENSXCOG00000018295	rnf17	96	31.277	ENSMNEG00000011234	RNF17	83	33.932	Macaca_nemestrina
ENSXCOG00000018295	rnf17	96	31.437	ENSMLEG00000030227	RNF17	85	31.459	Mandrillus_leucophaeus
ENSXCOG00000018295	rnf17	90	58.595	ENSMAMG00000020403	rnf17	92	58.226	Mastacembelus_armatus
ENSXCOG00000018295	rnf17	99	61.236	ENSMZEG00005019166	rnf17	90	60.231	Maylandia_zebra
ENSXCOG00000018295	rnf17	82	37.500	ENSMGAG00000015138	RNF17	94	37.500	Meleagris_gallopavo
ENSXCOG00000018295	rnf17	97	30.624	ENSMICG00000010364	RNF17	83	33.214	Microcebus_murinus
ENSXCOG00000018295	rnf17	54	33.591	ENSMOCG00000011818	-	92	38.235	Microtus_ochrogaster
ENSXCOG00000018295	rnf17	89	58.201	ENSMMOG00000019514	rnf17	90	57.968	Mola_mola
ENSXCOG00000018295	rnf17	76	35.432	ENSMODG00000007827	RNF17	84	31.155	Monodelphis_domestica
ENSXCOG00000018295	rnf17	99	57.183	ENSMALG00000016943	rnf17	99	57.234	Monopterus_albus
ENSXCOG00000018295	rnf17	76	33.626	MGP_CAROLIEiJ_G0019337	Rnf17	87	30.559	Mus_caroli
ENSXCOG00000018295	rnf17	87	33.714	ENSMUSG00000000365	Rnf17	87	30.696	Mus_musculus
ENSXCOG00000018295	rnf17	76	34.105	MGP_PahariEiJ_G0030355	Rnf17	67	33.906	Mus_pahari
ENSXCOG00000018295	rnf17	86	33.864	MGP_SPRETEiJ_G0020228	Rnf17	87	30.764	Mus_spretus
ENSXCOG00000018295	rnf17	76	33.900	ENSMPUG00000013305	RNF17	68	33.662	Mustela_putorius_furo
ENSXCOG00000018295	rnf17	76	33.748	ENSMLUG00000003903	RNF17	68	33.542	Myotis_lucifugus
ENSXCOG00000018295	rnf17	96	30.903	ENSNGAG00000013553	Rnf17	86	30.833	Nannospalax_galili
ENSXCOG00000018295	rnf17	88	57.300	ENSNBRG00000012006	rnf17	87	60.571	Neolamprologus_brichardi
ENSXCOG00000018295	rnf17	97	31.616	ENSNLEG00000013780	RNF17	84	34.331	Nomascus_leucogenys
ENSXCOG00000018295	rnf17	99	60.297	ENSONIG00000015746	rnf17	97	61.724	Oreochromis_niloticus
ENSXCOG00000018295	rnf17	76	34.050	ENSOCUG00000007384	RNF17	67	33.904	Oryctolagus_cuniculus
ENSXCOG00000018295	rnf17	92	53.904	ENSORLG00000012818	rnf17	93	53.677	Oryzias_latipes
ENSXCOG00000018295	rnf17	99	53.310	ENSORLG00020009879	-	90	53.101	Oryzias_latipes_hni
ENSXCOG00000018295	rnf17	99	52.962	ENSORLG00015013027	-	90	52.753	Oryzias_latipes_hsok
ENSXCOG00000018295	rnf17	88	57.372	ENSOMEG00000009891	rnf17	97	56.993	Oryzias_melastigma
ENSXCOG00000018295	rnf17	76	33.842	ENSOGAG00000014803	RNF17	69	36.250	Otolemur_garnettii
ENSXCOG00000018295	rnf17	76	34.199	ENSOARG00000014641	RNF17	68	34.087	Ovis_aries
ENSXCOG00000018295	rnf17	82	34.048	ENSPPAG00000028779	RNF17	84	34.513	Pan_paniscus
ENSXCOG00000018295	rnf17	97	30.459	ENSPPRG00000009230	RNF17	87	33.750	Panthera_pardus
ENSXCOG00000018295	rnf17	97	30.530	ENSPTIG00000001738	RNF17	87	33.750	Panthera_tigris_altaica
ENSXCOG00000018295	rnf17	97	31.404	ENSPTRG00000005713	RNF17	84	33.800	Pan_troglodytes
ENSXCOG00000018295	rnf17	96	31.206	ENSPANG00000007640	RNF17	83	33.932	Papio_anubis
ENSXCOG00000018295	rnf17	85	43.176	ENSPKIG00000001648	rnf17	95	42.622	Paramormyrops_kingsleyae
ENSXCOG00000018295	rnf17	76	35.897	ENSPSIG00000011245	RNF17	99	35.814	Pelodiscus_sinensis
ENSXCOG00000018295	rnf17	76	34.161	ENSPEMG00000008693	Rnf17	87	30.616	Peromyscus_maniculatus_bairdii
ENSXCOG00000018295	rnf17	63	34.517	ENSPCIG00000009190	-	92	34.323	Phascolarctos_cinereus
ENSXCOG00000018295	rnf17	99	81.991	ENSPFOG00000007124	rnf17	90	81.991	Poecilia_formosa
ENSXCOG00000018295	rnf17	99	82.912	ENSPLAG00000006198	rnf17	90	82.843	Poecilia_latipinna
ENSXCOG00000018295	rnf17	100	86.838	ENSPMEG00000022432	rnf17	100	86.767	Poecilia_mexicana
ENSXCOG00000018295	rnf17	81	89.474	ENSPREG00000001414	rnf17	80	89.474	Poecilia_reticulata
ENSXCOG00000018295	rnf17	97	31.171	ENSPPYG00000005215	RNF17	68	34.012	Pongo_abelii
ENSXCOG00000018295	rnf17	73	47.727	ENSPVAG00000013021	RNF17	70	47.727	Pteropus_vampyrus
ENSXCOG00000018295	rnf17	88	51.889	ENSPNAG00000027505	rnf17	92	51.763	Pygocentrus_nattereri
ENSXCOG00000018295	rnf17	76	33.392	ENSRNOG00000008059	Rnf17	87	30.293	Rattus_norvegicus
ENSXCOG00000018295	rnf17	84	32.459	ENSRBIG00000027010	RNF17	71	33.485	Rhinopithecus_bieti
ENSXCOG00000018295	rnf17	96	31.081	ENSRROG00000022801	RNF17	83	34.353	Rhinopithecus_roxellana
ENSXCOG00000018295	rnf17	77	33.656	ENSSBOG00000021661	RNF17	84	33.857	Saimiri_boliviensis_boliviensis
ENSXCOG00000018295	rnf17	76	34.857	ENSSHAG00000005609	RNF17	85	30.674	Sarcophilus_harrisii
ENSXCOG00000018295	rnf17	76	44.256	ENSSFOG00015023037	rnf17	80	44.087	Scleropages_formosus
ENSXCOG00000018295	rnf17	99	58.560	ENSSMAG00000007429	rnf17	98	58.071	Scophthalmus_maximus
ENSXCOG00000018295	rnf17	98	64.890	ENSSDUG00000013530	rnf17	100	64.037	Seriola_dumerili
ENSXCOG00000018295	rnf17	99	64.186	ENSSLDG00000019577	rnf17	99	63.282	Seriola_lalandi_dorsalis
ENSXCOG00000018295	rnf17	68	33.929	ENSSARG00000003016	RNF17	60	33.333	Sorex_araneus
ENSXCOG00000018295	rnf17	96	32.991	ENSSPUG00000008917	RNF17	91	33.065	Sphenodon_punctatus
ENSXCOG00000018295	rnf17	97	64.067	ENSSPAG00000001925	rnf17	99	63.703	Stegastes_partitus
ENSXCOG00000018295	rnf17	76	33.452	ENSSSCG00000009572	RNF17	82	30.327	Sus_scrofa
ENSXCOG00000018295	rnf17	56	34.745	ENSTGUG00000011267	-	99	34.513	Taeniopygia_guttata
ENSXCOG00000018295	rnf17	97	48.802	ENSTRUG00000015498	rnf17	87	48.478	Takifugu_rubripes
ENSXCOG00000018295	rnf17	76	52.700	ENSTNIG00000015681	rnf17	93	51.721	Tetraodon_nigroviridis
ENSXCOG00000018295	rnf17	81	31.898	ENSTBEG00000000282	RNF17	60	31.898	Tupaia_belangeri
ENSXCOG00000018295	rnf17	54	32.496	ENSUMAG00000013953	-	87	33.750	Ursus_maritimus
ENSXCOG00000018295	rnf17	98	30.715	ENSVVUG00000006226	RNF17	69	33.919	Vulpes_vulpes
ENSXCOG00000018295	rnf17	71	30.217	ENSXETG00000034020	RNF17	83	33.512	Xenopus_tropicalis
ENSXCOG00000018295	rnf17	100	97.325	ENSXMAG00000014747	rnf17	100	97.325	Xiphophorus_maculatus