EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3100 bases
Position: chrKQ557208.1:23870257-23873356
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024520	zf-C2H2	PF00096.26	9.3e-15	1	2
ENSXCOP00000024520	zf-C2H2	PF00096.26	9.3e-15	2	2
ENSXCOP00000024520	zf-met	PF12874.7	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024816	-	543	-	ENSXCOP00000024520	180 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018315	-	94	58.491	ENSXCOG00000019443	-	97	48.718
ENSXCOG00000018315	-	94	38.667	ENSXCOG00000007499	zbtb41	61	38.667
ENSXCOG00000018315	-	90	31.933	ENSXCOG00000003001	-	90	31.933
ENSXCOG00000018315	-	91	51.515	ENSXCOG00000010567	-	77	51.515
ENSXCOG00000018315	-	88	47.368	ENSXCOG00000003499	-	51	47.368
ENSXCOG00000018315	-	92	39.785	ENSXCOG00000012921	-	88	37.500
ENSXCOG00000018315	-	88	45.614	ENSXCOG00000009781	-	60	40.000
ENSXCOG00000018315	-	92	42.029	ENSXCOG00000003093	-	71	42.029
ENSXCOG00000018315	-	97	51.064	ENSXCOG00000009665	-	79	51.064
ENSXCOG00000018315	-	96	43.548	ENSXCOG00000007957	-	85	43.548
ENSXCOG00000018315	-	94	38.776	ENSXCOG00000016117	-	97	38.776
ENSXCOG00000018315	-	96	47.059	ENSXCOG00000007076	-	99	47.059
ENSXCOG00000018315	-	91	43.038	ENSXCOG00000019457	-	88	38.776
ENSXCOG00000018315	-	91	38.983	ENSXCOG00000013066	-	87	38.983
ENSXCOG00000018315	-	91	46.269	ENSXCOG00000002473	-	88	45.745
ENSXCOG00000018315	-	92	41.892	ENSXCOG00000009785	-	63	41.892
ENSXCOG00000018315	-	87	61.538	ENSXCOG00000007981	-	85	45.333
ENSXCOG00000018315	-	92	46.875	ENSXCOG00000006614	-	93	46.875
ENSXCOG00000018315	-	92	36.170	ENSXCOG00000018117	znf710b	57	33.136
ENSXCOG00000018315	-	95	46.316	ENSXCOG00000008116	-	91	43.564
ENSXCOG00000018315	-	96	44.554	ENSXCOG00000009003	-	85	44.554
ENSXCOG00000018315	-	92	45.283	ENSXCOG00000002714	-	73	45.283
ENSXCOG00000018315	-	88	43.038	ENSXCOG00000009777	-	55	43.038
ENSXCOG00000018315	-	91	40.000	ENSXCOG00000014363	-	61	40.000
ENSXCOG00000018315	-	90	47.059	ENSXCOG00000014361	-	66	47.059
ENSXCOG00000018315	-	92	47.945	ENSXCOG00000003484	-	53	47.945
ENSXCOG00000018315	-	97	31.757	ENSXCOG00000003435	-	83	31.757
ENSXCOG00000018315	-	87	41.121	ENSXCOG00000007396	-	84	41.121
ENSXCOG00000018315	-	84	34.266	ENSXCOG00000020768	-	67	34.266
ENSXCOG00000018315	-	93	43.056	ENSXCOG00000019377	-	93	43.056
ENSXCOG00000018315	-	94	39.560	ENSXCOG00000007414	-	94	39.560
ENSXCOG00000018315	-	92	45.070	ENSXCOG00000007368	-	92	43.750
ENSXCOG00000018315	-	94	34.503	ENSXCOG00000003896	-	61	43.750
ENSXCOG00000018315	-	92	40.625	ENSXCOG00000003532	-	75	40.625
ENSXCOG00000018315	-	89	46.479	ENSXCOG00000007376	-	91	43.011
ENSXCOG00000018315	-	97	42.308	ENSXCOG00000009597	ZNF319	87	42.308
ENSXCOG00000018315	-	90	37.324	ENSXCOG00000010576	-	68	37.324
ENSXCOG00000018315	-	91	42.718	ENSXCOG00000010259	-	56	42.718
ENSXCOG00000018315	-	94	49.351	ENSXCOG00000019382	-	67	49.351
ENSXCOG00000018315	-	90	41.096	ENSXCOG00000007979	-	68	41.096
ENSXCOG00000018315	-	92	39.073	ENSXCOG00000013004	-	73	39.073
ENSXCOG00000018315	-	94	47.887	ENSXCOG00000001116	-	86	47.887
ENSXCOG00000018315	-	97	48.421	ENSXCOG00000002857	-	77	49.462
ENSXCOG00000018315	-	92	46.835	ENSXCOG00000010950	si:dkey-210j14.3	60	46.835
ENSXCOG00000018315	-	95	43.103	ENSXCOG00000015441	-	78	43.103
ENSXCOG00000018315	-	93	42.857	ENSXCOG00000007987	-	76	42.857
ENSXCOG00000018315	-	94	54.412	ENSXCOG00000016307	-	80	54.412
ENSXCOG00000018315	-	94	39.286	ENSXCOG00000003537	-	76	34.211
ENSXCOG00000018315	-	95	44.898	ENSXCOG00000019481	-	78	44.898
ENSXCOG00000018315	-	99	52.830	ENSXCOG00000016567	-	76	52.830
ENSXCOG00000018315	-	82	49.485	ENSXCOG00000013306	-	51	49.485
ENSXCOG00000018315	-	92	44.444	ENSXCOG00000009186	-	89	44.444
ENSXCOG00000018315	-	91	41.584	ENSXCOG00000003493	-	66	41.584
ENSXCOG00000018315	-	92	53.012	ENSXCOG00000001226	-	91	42.308
ENSXCOG00000018315	-	92	40.506	ENSXCOG00000006951	-	70	40.506
ENSXCOG00000018315	-	92	46.479	ENSXCOG00000003472	-	80	46.479
ENSXCOG00000018315	-	88	49.231	ENSXCOG00000007413	-	55	49.231
ENSXCOG00000018315	-	92	35.570	ENSXCOG00000009794	-	69	35.570
ENSXCOG00000018315	-	89	38.462	ENSXCOG00000009798	-	67	38.462
ENSXCOG00000018315	-	97	45.098	ENSXCOG00000007529	-	96	49.315
ENSXCOG00000018315	-	92	49.254	ENSXCOG00000007994	-	89	39.634
ENSXCOG00000018315	-	73	36.641	ENSXCOG00000018615	-	84	36.641
ENSXCOG00000018315	-	92	38.462	ENSXCOG00000012924	-	92	38.462
ENSXCOG00000018315	-	97	45.122	ENSXCOG00000012458	-	59	45.122
ENSXCOG00000018315	-	92	44.330	ENSXCOG00000000354	-	70	44.330
ENSXCOG00000018315	-	97	51.562	ENSXCOG00000007406	-	98	50.588
ENSXCOG00000018315	-	52	44.156	ENSXCOG00000000254	-	58	44.156
ENSXCOG00000018315	-	90	34.746	ENSXCOG00000002869	-	62	32.824
ENSXCOG00000018315	-	92	48.052	ENSXCOG00000019492	-	88	40.426
ENSXCOG00000018315	-	95	45.361	ENSXCOG00000008062	-	94	47.887
ENSXCOG00000018315	-	98	33.735	ENSXCOG00000009772	-	78	33.735
ENSXCOG00000018315	-	91	36.420	ENSXCOG00000015947	-	91	36.420
ENSXCOG00000018315	-	91	43.617	ENSXCOG00000009992	zbtb47b	66	43.617
ENSXCOG00000018315	-	91	43.056	ENSXCOG00000006553	-	72	43.056
ENSXCOG00000018315	-	90	39.785	ENSXCOG00000009668	-	58	39.785
ENSXCOG00000018315	-	92	39.241	ENSXCOG00000003530	-	83	39.241
ENSXCOG00000018315	-	92	48.052	ENSXCOG00000003538	-	100	46.988
ENSXCOG00000018315	-	97	45.263	ENSXCOG00000002898	-	74	45.263
ENSXCOG00000018315	-	90	47.312	ENSXCOG00000013870	-	71	47.312
ENSXCOG00000018315	-	97	47.500	ENSXCOG00000007139	-	70	47.500
ENSXCOG00000018315	-	96	36.923	ENSXCOG00000011725	-	92	37.255
ENSXCOG00000018315	-	93	42.958	ENSXCOG00000001200	-	92	39.205
ENSXCOG00000018315	-	95	35.838	ENSXCOG00000007941	-	90	35.811
ENSXCOG00000018315	-	97	36.875	ENSXCOG00000007945	-	88	43.939
ENSXCOG00000018315	-	89	41.304	ENSXCOG00000008978	-	89	41.304
ENSXCOG00000018315	-	87	50.794	ENSXCOG00000019484	-	87	39.286
ENSXCOG00000018315	-	89	39.362	ENSXCOG00000003431	-	79	39.362
ENSXCOG00000018315	-	91	42.593	ENSXCOG00000019482	-	80	42.593
ENSXCOG00000018315	-	96	45.545	ENSXCOG00000018253	-	90	45.545
ENSXCOG00000018315	-	96	37.580	ENSXCOG00000002512	-	80	48.837
ENSXCOG00000018315	-	92	37.342	ENSXCOG00000007937	-	73	37.342
ENSXCOG00000018315	-	93	45.000	ENSXCOG00000008083	-	90	36.095
ENSXCOG00000018315	-	99	39.130	ENSXCOG00000019401	-	94	39.130
ENSXCOG00000018315	-	93	41.837	ENSXCOG00000003451	-	85	40.449
ENSXCOG00000018315	-	91	36.306	ENSXCOG00000009768	-	74	36.306
ENSXCOG00000018315	-	91	54.545	ENSXCOG00000000528	-	78	54.545
ENSXCOG00000018315	-	94	49.296	ENSXCOG00000016860	-	97	37.423
ENSXCOG00000018315	-	92	37.113	ENSXCOG00000017871	zgc:113343	63	37.113
ENSXCOG00000018315	-	89	45.161	ENSXCOG00000003468	-	77	42.857
ENSXCOG00000018315	-	94	52.830	ENSXCOG00000017328	-	75	52.830
ENSXCOG00000018315	-	92	41.667	ENSXCOG00000001292	-	85	41.667
ENSXCOG00000018315	-	94	40.000	ENSXCOG00000015312	-	86	46.875
ENSXCOG00000018315	-	88	43.590	ENSXCOG00000015084	snai2	51	43.590
ENSXCOG00000018315	-	92	40.777	ENSXCOG00000008567	prdm5	58	33.088
ENSXCOG00000018315	-	88	45.652	ENSXCOG00000010488	-	60	45.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018315	-	88	43.038	ENSAPOG00000021496	-	50	43.038	Acanthochromis_polyacanthus
ENSXCOG00000018315	-	87	37.654	ENSACIG00000016133	-	57	37.654	Amphilophus_citrinellus
ENSXCOG00000018315	-	88	46.250	ENSAPEG00000011635	-	56	36.170	Amphiprion_percula
ENSXCOG00000018315	-	93	40.426	ENSATEG00000011235	-	54	40.426	Anabas_testudineus
ENSXCOG00000018315	-	91	44.304	ENSATEG00000024551	-	65	44.304	Anabas_testudineus
ENSXCOG00000018315	-	88	48.913	ENSATEG00000011202	-	51	48.913	Anabas_testudineus
ENSXCOG00000018315	-	98	53.247	ENSATEG00000022022	-	93	53.247	Anabas_testudineus
ENSXCOG00000018315	-	91	32.026	ENSATEG00000015828	-	63	32.026	Anabas_testudineus
ENSXCOG00000018315	-	86	39.437	ENSCVAG00000003630	-	54	39.437	Cyprinodon_variegatus
ENSXCOG00000018315	-	87	43.662	ENSCVAG00000004508	-	57	43.662	Cyprinodon_variegatus
ENSXCOG00000018315	-	79	48.750	ENSHCOG00000008205	-	67	48.750	Hippocampus_comes
ENSXCOG00000018315	-	95	42.029	ENSKMAG00000000520	-	51	42.029	Kryptolebias_marmoratus
ENSXCOG00000018315	-	88	46.250	ENSMALG00000014761	-	59	46.250	Monopterus_albus
ENSXCOG00000018315	-	88	47.297	ENSNBRG00000004381	-	74	50.877	Neolamprologus_brichardi
ENSXCOG00000018315	-	91	43.478	ENSORLG00000025719	-	52	43.478	Oryzias_latipes
ENSXCOG00000018315	-	92	33.750	ENSORLG00020009554	-	75	33.750	Oryzias_latipes_hni
ENSXCOG00000018315	-	88	37.755	ENSORLG00020005815	-	72	37.755	Oryzias_latipes_hni
ENSXCOG00000018315	-	91	43.478	ENSORLG00015012599	-	52	43.478	Oryzias_latipes_hsok
ENSXCOG00000018315	-	91	39.604	ENSOMEG00000015640	-	55	39.604	Oryzias_melastigma
ENSXCOG00000018315	-	88	41.414	ENSPLAG00000009651	-	63	36.047	Poecilia_latipinna
ENSXCOG00000018315	-	88	34.899	ENSPMEG00000023113	-	58	34.899	Poecilia_mexicana
ENSXCOG00000018315	-	91	43.750	ENSPREG00000004006	-	52	43.750	Poecilia_reticulata
ENSXCOG00000018315	-	91	37.895	ENSPREG00000016270	-	76	37.895	Poecilia_reticulata
ENSXCOG00000018315	-	89	45.000	ENSPNYG00000023882	-	63	45.000	Pundamilia_nyererei
ENSXCOG00000018315	-	97	39.796	ENSPNYG00000019187	-	69	39.796	Pundamilia_nyererei
ENSXCOG00000018315	-	99	54.054	ENSPNAG00000010317	-	85	54.054	Pygocentrus_nattereri
ENSXCOG00000018315	-	91	46.591	ENSSLDG00000007568	-	71	46.591	Seriola_lalandi_dorsalis
ENSXCOG00000018315	-	91	44.304	ENSSPAG00000010524	-	57	44.304	Stegastes_partitus
ENSXCOG00000018315	-	91	46.875	ENSXETG00000002690	-	54	46.875	Xenopus_tropicalis