EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018421 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 693 bases
Position: chrKQ557208.1:10503895-10504587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024654	MMR_HSR1	PF01926.23	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024952	-	693	-	ENSXCOP00000024654	230 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018421	-	81	36.126	ENSXCOG00000014966	zgc:113625	78	36.126
ENSXCOG00000018421	-	70	35.928	ENSXCOG00000006729	-	72	35.928
ENSXCOG00000018421	-	84	37.186	ENSXCOG00000012536	-	52	37.186
ENSXCOG00000018421	-	86	42.714	ENSXCOG00000009005	-	86	39.035
ENSXCOG00000018421	-	85	33.500	ENSXCOG00000014518	-	59	33.495
ENSXCOG00000018421	-	88	35.961	ENSXCOG00000014517	-	69	35.961
ENSXCOG00000018421	-	81	35.106	ENSXCOG00000009883	-	60	35.106
ENSXCOG00000018421	-	83	35.468	ENSXCOG00000006802	-	67	35.468
ENSXCOG00000018421	-	77	32.461	ENSXCOG00000006801	-	55	32.461
ENSXCOG00000018421	-	98	35.217	ENSXCOG00000009375	si:ch211-113e8.5	82	35.217
ENSXCOG00000018421	-	88	34.928	ENSXCOG00000016294	-	74	33.190
ENSXCOG00000018421	-	87	32.420	ENSXCOG00000016292	-	76	32.420
ENSXCOG00000018421	-	85	30.097	ENSXCOG00000016291	-	94	30.097
ENSXCOG00000018421	-	96	31.466	ENSXCOG00000013367	-	74	31.466
ENSXCOG00000018421	-	85	35.025	ENSXCOG00000011339	-	71	35.025
ENSXCOG00000018421	-	85	35.329	ENSXCOG00000006733	-	82	35.329
ENSXCOG00000018421	-	99	35.470	ENSXCOG00000017908	-	63	35.652
ENSXCOG00000018421	-	98	32.159	ENSXCOG00000018711	-	77	32.159
ENSXCOG00000018421	-	77	35.519	ENSXCOG00000018335	-	65	35.519
ENSXCOG00000018421	-	81	35.789	ENSXCOG00000018338	-	77	35.789
ENSXCOG00000018421	-	77	38.298	ENSXCOG00000013594	-	72	38.298
ENSXCOG00000018421	-	97	30.222	ENSXCOG00000019572	-	61	30.222
ENSXCOG00000018421	-	81	32.979	ENSXCOG00000019571	-	73	32.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018421	-	100	40.161	ENSAPOG00000019154	-	55	40.161	Acanthochromis_polyacanthus
ENSXCOG00000018421	-	99	36.245	ENSAPOG00000006502	-	54	36.245	Acanthochromis_polyacanthus
ENSXCOG00000018421	-	75	36.416	ENSACIG00000007737	-	68	37.569	Amphilophus_citrinellus
ENSXCOG00000018421	-	87	36.232	ENSACIG00000009811	-	85	36.232	Amphilophus_citrinellus
ENSXCOG00000018421	-	96	40.991	ENSACIG00000007725	-	78	40.991	Amphilophus_citrinellus
ENSXCOG00000018421	-	97	46.277	ENSAOCG00000004579	-	80	47.727	Amphiprion_ocellaris
ENSXCOG00000018421	-	91	35.160	ENSAOCG00000003425	-	82	35.160	Amphiprion_ocellaris
ENSXCOG00000018421	-	81	47.340	ENSAPEG00000014403	-	62	47.340	Amphiprion_percula
ENSXCOG00000018421	-	100	40.964	ENSAPEG00000001491	-	67	40.964	Amphiprion_percula
ENSXCOG00000018421	-	87	37.129	ENSATEG00000023053	-	87	37.129	Anabas_testudineus
ENSXCOG00000018421	-	100	47.917	ENSATEG00000015654	-	70	47.917	Anabas_testudineus
ENSXCOG00000018421	-	99	45.652	ENSACLG00000014795	-	73	45.652	Astatotilapia_calliptera
ENSXCOG00000018421	-	77	37.363	ENSAMXG00000009216	-	85	37.363	Astyanax_mexicanus
ENSXCOG00000018421	-	95	47.644	ENSAMXG00000030744	-	88	44.954	Astyanax_mexicanus
ENSXCOG00000018421	-	99	40.984	ENSAMXG00000006064	-	77	40.984	Astyanax_mexicanus
ENSXCOG00000018421	-	80	43.229	ENSAMXG00000026085	-	76	41.981	Astyanax_mexicanus
ENSXCOG00000018421	-	100	35.242	ENSAMXG00000021387	-	76	35.242	Astyanax_mexicanus
ENSXCOG00000018421	-	99	46.087	ENSAMXG00000019109	-	94	46.087	Astyanax_mexicanus
ENSXCOG00000018421	-	95	37.864	ENSAMXG00000033117	-	94	35.135	Astyanax_mexicanus
ENSXCOG00000018421	-	97	40.000	ENSCSEG00000021519	-	76	49.057	Cynoglossus_semilaevis
ENSXCOG00000018421	-	99	42.616	ENSCVAG00000003054	-	78	42.616	Cyprinodon_variegatus
ENSXCOG00000018421	-	100	79.654	ENSCVAG00000012268	-	76	79.654	Cyprinodon_variegatus
ENSXCOG00000018421	-	81	54.787	ENSCVAG00000005778	-	65	54.787	Cyprinodon_variegatus
ENSXCOG00000018421	-	83	39.062	ENSDARG00000102683	CR626941.1	71	39.062	Danio_rerio
ENSXCOG00000018421	-	96	48.691	ENSDARG00000063481	si:ch211-214j24.15	63	44.344	Danio_rerio
ENSXCOG00000018421	-	79	39.130	ENSELUG00000018709	-	55	39.130	Esox_lucius
ENSXCOG00000018421	-	79	50.820	ENSELUG00000024502	-	66	50.820	Esox_lucius
ENSXCOG00000018421	-	81	48.663	ENSELUG00000018192	-	87	48.663	Esox_lucius
ENSXCOG00000018421	-	81	35.294	ENSELUG00000003217	-	78	35.294	Esox_lucius
ENSXCOG00000018421	-	77	37.222	ENSFHEG00000020783	-	78	37.222	Fundulus_heteroclitus
ENSXCOG00000018421	-	77	45.506	ENSFHEG00000023334	-	68	45.506	Fundulus_heteroclitus
ENSXCOG00000018421	-	81	42.564	ENSGMOG00000001626	-	98	43.017	Gadus_morhua
ENSXCOG00000018421	-	77	34.078	ENSGAFG00000020826	-	80	34.078	Gambusia_affinis
ENSXCOG00000018421	-	83	50.000	ENSHBUG00000016284	-	88	50.000	Haplochromis_burtoni
ENSXCOG00000018421	-	86	41.500	ENSHBUG00000008326	-	96	40.991	Haplochromis_burtoni
ENSXCOG00000018421	-	98	35.931	ENSHBUG00000001242	-	56	35.931	Haplochromis_burtoni
ENSXCOG00000018421	-	80	39.683	ENSIPUG00000013342	-	60	39.683	Ictalurus_punctatus
ENSXCOG00000018421	-	96	42.222	ENSKMAG00000004774	-	74	42.381	Kryptolebias_marmoratus
ENSXCOG00000018421	-	94	37.727	ENSKMAG00000014605	-	71	37.727	Kryptolebias_marmoratus
ENSXCOG00000018421	-	77	35.065	ENSKMAG00000014764	-	75	35.065	Kryptolebias_marmoratus
ENSXCOG00000018421	-	99	42.358	ENSKMAG00000009600	-	80	42.358	Kryptolebias_marmoratus
ENSXCOG00000018421	-	83	41.451	ENSLBEG00000019652	-	66	43.523	Labrus_bergylta
ENSXCOG00000018421	-	81	46.032	ENSLOCG00000012075	-	85	46.561	Lepisosteus_oculatus
ENSXCOG00000018421	-	97	40.517	ENSLOCG00000016496	-	66	40.517	Lepisosteus_oculatus
ENSXCOG00000018421	-	87	45.274	ENSLOCG00000000082	-	89	40.741	Lepisosteus_oculatus
ENSXCOG00000018421	-	83	50.259	ENSLOCG00000017852	-	80	46.364	Lepisosteus_oculatus
ENSXCOG00000018421	-	95	42.922	ENSLOCG00000018072	-	84	42.922	Lepisosteus_oculatus
ENSXCOG00000018421	-	83	44.271	ENSLOCG00000000517	-	59	44.271	Lepisosteus_oculatus
ENSXCOG00000018421	-	83	44.792	ENSLOCG00000000385	-	70	43.256	Lepisosteus_oculatus
ENSXCOG00000018421	-	95	42.793	ENSMAMG00000021969	-	60	42.793	Mastacembelus_armatus
ENSXCOG00000018421	-	83	46.073	ENSMAMG00000015600	-	69	44.149	Mastacembelus_armatus
ENSXCOG00000018421	-	93	35.514	ENSMAMG00000021970	-	93	35.514	Mastacembelus_armatus
ENSXCOG00000018421	-	78	35.359	ENSMMOG00000016864	-	69	35.417	Mola_mola
ENSXCOG00000018421	-	100	39.662	ENSMMOG00000012876	-	73	39.662	Mola_mola
ENSXCOG00000018421	-	90	38.528	ENSNBRG00000002136	-	79	38.528	Neolamprologus_brichardi
ENSXCOG00000018421	-	97	40.265	ENSORLG00000002537	-	65	40.265	Oryzias_latipes
ENSXCOG00000018421	-	97	44.920	ENSORLG00000002031	-	63	44.920	Oryzias_latipes
ENSXCOG00000018421	-	82	32.632	ENSORLG00020017387	-	80	32.632	Oryzias_latipes_hni
ENSXCOG00000018421	-	99	44.920	ENSORLG00020008286	-	82	44.920	Oryzias_latipes_hni
ENSXCOG00000018421	-	97	44.920	ENSORLG00020008323	-	62	44.920	Oryzias_latipes_hni
ENSXCOG00000018421	-	99	41.126	ENSORLG00020011284	-	76	41.126	Oryzias_latipes_hni
ENSXCOG00000018421	-	97	44.920	ENSORLG00015004522	-	61	44.920	Oryzias_latipes_hsok
ENSXCOG00000018421	-	75	34.286	ENSORLG00015023234	-	88	34.286	Oryzias_latipes_hsok
ENSXCOG00000018421	-	97	41.518	ENSORLG00015004110	-	65	41.518	Oryzias_latipes_hsok
ENSXCOG00000018421	-	97	42.396	ENSOMEG00000020433	-	83	41.892	Oryzias_melastigma
ENSXCOG00000018421	-	100	45.833	ENSOMEG00000010594	-	83	45.833	Oryzias_melastigma
ENSXCOG00000018421	-	82	47.895	ENSPKIG00000017193	-	81	47.895	Paramormyrops_kingsleyae
ENSXCOG00000018421	-	99	45.415	ENSPKIG00000017688	-	80	45.415	Paramormyrops_kingsleyae
ENSXCOG00000018421	-	77	37.017	ENSPMGG00000017993	-	71	37.017	Periophthalmus_magnuspinnatus
ENSXCOG00000018421	-	87	43.350	ENSPMGG00000014055	-	81	43.350	Periophthalmus_magnuspinnatus
ENSXCOG00000018421	-	96	36.726	ENSPMGG00000014056	-	85	36.726	Periophthalmus_magnuspinnatus
ENSXCOG00000018421	-	100	84.416	ENSPFOG00000015875	-	84	84.416	Poecilia_formosa
ENSXCOG00000018421	-	98	81.858	ENSPFOG00000015871	-	84	81.858	Poecilia_formosa
ENSXCOG00000018421	-	99	66.834	ENSPFOG00000022853	-	91	66.834	Poecilia_formosa
ENSXCOG00000018421	-	100	43.147	ENSPFOG00000016787	-	92	43.147	Poecilia_formosa
ENSXCOG00000018421	-	100	83.550	ENSPFOG00000013349	-	77	83.550	Poecilia_formosa
ENSXCOG00000018421	-	76	69.492	ENSPFOG00000022479	-	75	69.492	Poecilia_formosa
ENSXCOG00000018421	-	100	85.217	ENSPFOG00000013109	-	89	85.789	Poecilia_formosa
ENSXCOG00000018421	-	99	82.105	ENSPFOG00000015865	-	91	82.105	Poecilia_formosa
ENSXCOG00000018421	-	98	66.055	ENSPFOG00000000191	-	74	66.055	Poecilia_formosa
ENSXCOG00000018421	-	86	44.221	ENSPFOG00000005689	si:dkey-185m8.2	70	44.221	Poecilia_formosa
ENSXCOG00000018421	-	99	84.348	ENSPFOG00000012732	-	73	84.348	Poecilia_formosa
ENSXCOG00000018421	-	80	34.637	ENSPFOG00000006124	-	80	34.637	Poecilia_formosa
ENSXCOG00000018421	-	81	52.790	ENSPLAG00000018692	-	84	53.879	Poecilia_latipinna
ENSXCOG00000018421	-	99	82.969	ENSPLAG00000003020	-	77	82.969	Poecilia_latipinna
ENSXCOG00000018421	-	76	33.523	ENSPLAG00000018911	-	65	33.523	Poecilia_latipinna
ENSXCOG00000018421	-	94	40.092	ENSPLAG00000018606	-	83	40.092	Poecilia_latipinna
ENSXCOG00000018421	-	99	85.864	ENSPLAG00000020776	-	83	85.864	Poecilia_latipinna
ENSXCOG00000018421	-	81	50.000	ENSPLAG00000018664	-	66	51.667	Poecilia_latipinna
ENSXCOG00000018421	-	100	82.684	ENSPMEG00000005912	-	73	82.684	Poecilia_mexicana
ENSXCOG00000018421	-	76	32.955	ENSPMEG00000018950	-	65	32.955	Poecilia_mexicana
ENSXCOG00000018421	-	100	40.889	ENSPMEG00000000604	-	75	40.889	Poecilia_mexicana
ENSXCOG00000018421	-	100	86.147	ENSPMEG00000020297	-	83	86.147	Poecilia_mexicana
ENSXCOG00000018421	-	68	78.616	ENSPMEG00000020252	-	70	78.616	Poecilia_mexicana
ENSXCOG00000018421	-	97	52.209	ENSPMEG00000000724	-	68	52.209	Poecilia_mexicana
ENSXCOG00000018421	-	82	54.974	ENSPMEG00000010605	-	77	54.974	Poecilia_mexicana
ENSXCOG00000018421	-	77	60.221	ENSPMEG00000006334	-	63	60.221	Poecilia_mexicana
ENSXCOG00000018421	-	100	81.304	ENSPREG00000001250	-	91	81.304	Poecilia_reticulata
ENSXCOG00000018421	-	100	39.732	ENSPREG00000020440	-	77	39.732	Poecilia_reticulata
ENSXCOG00000018421	-	98	85.398	ENSPREG00000001530	-	78	85.398	Poecilia_reticulata
ENSXCOG00000018421	-	99	38.528	ENSPNYG00000010004	-	79	38.528	Pundamilia_nyererei
ENSXCOG00000018421	-	80	39.474	ENSPNAG00000025850	-	67	39.474	Pygocentrus_nattereri
ENSXCOG00000018421	-	94	40.476	ENSPNAG00000013132	-	70	40.476	Pygocentrus_nattereri
ENSXCOG00000018421	-	99	42.105	ENSPNAG00000002097	-	91	42.105	Pygocentrus_nattereri
ENSXCOG00000018421	-	97	38.596	ENSPNAG00000019899	-	89	38.596	Pygocentrus_nattereri
ENSXCOG00000018421	-	96	40.984	ENSPNAG00000014932	-	64	40.984	Pygocentrus_nattereri
ENSXCOG00000018421	-	93	34.802	ENSSFOG00015002503	-	87	34.802	Scleropages_formosus
ENSXCOG00000018421	-	78	39.779	ENSSFOG00015002507	-	69	39.779	Scleropages_formosus
ENSXCOG00000018421	-	90	39.130	ENSSFOG00015002420	-	78	39.130	Scleropages_formosus
ENSXCOG00000018421	-	95	38.739	ENSSMAG00000012187	-	64	38.739	Scophthalmus_maximus
ENSXCOG00000018421	-	99	41.304	ENSSDUG00000022299	-	87	41.304	Seriola_dumerili
ENSXCOG00000018421	-	95	41.892	ENSSLDG00000005786	-	66	41.892	Seriola_lalandi_dorsalis
ENSXCOG00000018421	-	87	45.833	ENSSLDG00000009168	-	90	41.880	Seriola_lalandi_dorsalis
ENSXCOG00000018421	-	99	44.059	ENSSLDG00000010531	-	91	42.152	Seriola_lalandi_dorsalis
ENSXCOG00000018421	-	99	40.000	ENSSPAG00000017616	-	79	40.000	Stegastes_partitus
ENSXCOG00000018421	-	98	39.381	ENSSPAG00000015927	-	89	41.150	Stegastes_partitus
ENSXCOG00000018421	-	95	36.036	ENSTRUG00000020422	-	75	36.036	Takifugu_rubripes
ENSXCOG00000018421	-	95	42.273	ENSTRUG00000018070	-	72	42.273	Takifugu_rubripes
ENSXCOG00000018421	-	95	40.000	ENSTNIG00000004275	-	92	40.000	Tetraodon_nigroviridis
ENSXCOG00000018421	-	93	42.593	ENSTNIG00000004220	-	87	42.593	Tetraodon_nigroviridis
ENSXCOG00000018421	-	100	82.743	ENSXMAG00000023360	-	83	82.743	Xiphophorus_maculatus