EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018425 (Gene tree)
Gene ID: -
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: guanine nucleotide binding protein-like 3 (nucleolar)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4264 bases
Position: chrKQ557213.1:8545972-8550235
Accession: ZDB-GENE-030131-616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024665	GN3L_Grn1	PF08701.11	1.3e-22	1	1
ENSXCOP00000024670	GN3L_Grn1	PF08701.11	1.3e-22	1	1
ENSXCOP00000024666	GN3L_Grn1	PF08701.11	2.1e-20	1	1
ENSXCOP00000024663	GN3L_Grn1	PF08701.11	2.3e-19	1	1
ENSXCOP00000024666	MMR_HSR1	PF01926.23	8.9e-15	1	1
ENSXCOP00000024665	MMR_HSR1	PF01926.23	1.1e-14	1	1
ENSXCOP00000024663	MMR_HSR1	PF01926.23	1.3e-14	1	1
ENSXCOP00000024670	MMR_HSR1	PF01926.23	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000024961	-	1344	-	ENSXCOP00000024663	447 (aa)	-	-
ENSXCOT00000024968	-	1275	-	ENSXCOP00000024670	425 (aa)	-	-
ENSXCOT00000024963	-	1404	-	ENSXCOP00000024665	467 (aa)	-	-
ENSXCOT00000024964	-	1242	-	ENSXCOP00000024666	413 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018425	gnl3	95	40.288	ENSXCOG00000011839	gnl3l	70	43.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018425	gnl3	95	47.758	ENSG00000163938	GNL3	100	53.623	Homo_sapiens
ENSXCOG00000018425	gnl3	97	77.419	ENSAPOG00000004048	gnl3	86	77.419	Acanthochromis_polyacanthus
ENSXCOG00000018425	gnl3	94	46.602	ENSAMEG00000008456	GNL3	79	44.889	Ailuropoda_melanoleuca
ENSXCOG00000018425	gnl3	99	70.194	ENSACIG00000000545	gnl3	96	67.804	Amphilophus_citrinellus
ENSXCOG00000018425	gnl3	96	77.419	ENSAOCG00000012879	gnl3	99	56.058	Amphiprion_ocellaris
ENSXCOG00000018425	gnl3	96	77.419	ENSAPEG00000006146	gnl3	86	77.419	Amphiprion_percula
ENSXCOG00000018425	gnl3	96	80.645	ENSATEG00000024242	gnl3	99	54.529	Anabas_testudineus
ENSXCOG00000018425	gnl3	91	48.387	ENSAPLG00000005171	GNL3	75	48.049	Anas_platyrhynchos
ENSXCOG00000018425	gnl3	93	50.843	ENSACAG00000007357	GNL3	80	48.000	Anolis_carolinensis
ENSXCOG00000018425	gnl3	95	47.085	ENSANAG00000033209	GNL3	81	47.085	Aotus_nancymaae
ENSXCOG00000018425	gnl3	97	69.365	ENSACLG00000007381	gnl3	99	61.404	Astatotilapia_calliptera
ENSXCOG00000018425	gnl3	95	56.473	ENSAMXG00000020880	gnl3	88	50.203	Astyanax_mexicanus
ENSXCOG00000018425	gnl3	96	48.222	ENSBTAG00000014549	GNL3	80	48.444	Bos_taurus
ENSXCOG00000018425	gnl3	95	46.861	ENSCJAG00000006864	-	81	46.861	Callithrix_jacchus
ENSXCOG00000018425	gnl3	95	46.861	ENSCJAG00000044256	-	81	46.861	Callithrix_jacchus
ENSXCOG00000018425	gnl3	94	47.816	ENSCAFG00000009004	GNL3	79	46.222	Canis_familiaris
ENSXCOG00000018425	gnl3	94	48.058	ENSCAFG00020002613	GNL3	88	46.429	Canis_lupus_dingo
ENSXCOG00000018425	gnl3	95	48.667	ENSCHIG00000022181	GNL3	88	44.699	Capra_hircus
ENSXCOG00000018425	gnl3	96	46.222	ENSTSYG00000006851	GNL3	88	43.154	Carlito_syrichta
ENSXCOG00000018425	gnl3	95	44.686	ENSCPOG00000000282	GNL3	82	44.270	Cavia_porcellus
ENSXCOG00000018425	gnl3	95	47.085	ENSCCAG00000033281	GNL3	81	47.085	Cebus_capucinus
ENSXCOG00000018425	gnl3	95	47.309	ENSCATG00000040886	GNL3	80	47.309	Cercocebus_atys
ENSXCOG00000018425	gnl3	95	47.129	ENSCLAG00000010109	-	81	46.847	Chinchilla_lanigera
ENSXCOG00000018425	gnl3	95	46.861	ENSCSAG00000013315	GNL3	80	46.861	Chlorocebus_sabaeus
ENSXCOG00000018425	gnl3	99	42.653	ENSCHOG00000002726	GNL3	87	43.061	Choloepus_hoffmanni
ENSXCOG00000018425	gnl3	74	53.185	ENSCPBG00000018330	-	70	52.795	Chrysemys_picta_bellii
ENSXCOG00000018425	gnl3	94	46.469	ENSCANG00000039969	GNL3	80	46.469	Colobus_angolensis_palliatus
ENSXCOG00000018425	gnl3	100	43.711	ENSCGRG00001020950	Gnl3	90	43.711	Cricetulus_griseus_chok1gshd
ENSXCOG00000018425	gnl3	100	43.711	ENSCGRG00000015225	Gnl3	90	43.711	Cricetulus_griseus_crigri
ENSXCOG00000018425	gnl3	99	66.161	ENSCSEG00000005009	gnl3	87	62.553	Cynoglossus_semilaevis
ENSXCOG00000018425	gnl3	95	82.405	ENSCVAG00000010679	gnl3	81	82.405	Cyprinodon_variegatus
ENSXCOG00000018425	gnl3	98	55.531	ENSDARG00000006219	gnl3	85	52.842	Danio_rerio
ENSXCOG00000018425	gnl3	94	48.780	ENSDNOG00000001037	GNL3	79	47.758	Dasypus_novemcinctus
ENSXCOG00000018425	gnl3	95	47.343	ENSDORG00000000674	Gnl3	82	47.297	Dipodomys_ordii
ENSXCOG00000018425	gnl3	92	75.758	ENSETEG00000016534	-	70	65.152	Echinops_telfairi
ENSXCOG00000018425	gnl3	94	48.900	ENSEASG00005014636	GNL3	99	40.000	Equus_asinus_asinus
ENSXCOG00000018425	gnl3	94	48.905	ENSECAG00000014850	GNL3	79	46.813	Equus_caballus
ENSXCOG00000018425	gnl3	96	47.439	ENSEEUG00000004427	GNL3	81	47.661	Erinaceus_europaeus
ENSXCOG00000018425	gnl3	96	71.875	ENSELUG00000008767	gnl3	86	71.875	Esox_lucius
ENSXCOG00000018425	gnl3	94	49.029	ENSFCAG00000015719	GNL3	80	48.000	Felis_catus
ENSXCOG00000018425	gnl3	95	52.759	ENSFALG00000008957	GNL3	81	52.759	Ficedula_albicollis
ENSXCOG00000018425	gnl3	95	45.169	ENSFDAG00000020679	GNL3	81	45.169	Fukomys_damarensis
ENSXCOG00000018425	gnl3	99	79.526	ENSFHEG00000020897	gnl3	99	64.168	Fundulus_heteroclitus
ENSXCOG00000018425	gnl3	95	61.830	ENSGMOG00000001745	gnl3	79	61.830	Gadus_morhua
ENSXCOG00000018425	gnl3	95	50.111	ENSGALG00000001613	GNL3	78	50.334	Gallus_gallus
ENSXCOG00000018425	gnl3	99	74.764	ENSGAFG00000007184	gnl3	100	72.600	Gambusia_affinis
ENSXCOG00000018425	gnl3	96	66.300	ENSGACG00000000309	gnl3	82	68.132	Gasterosteus_aculeatus
ENSXCOG00000018425	gnl3	75	52.698	ENSGAGG00000021579	-	72	53.374	Gopherus_agassizii
ENSXCOG00000018425	gnl3	95	47.758	ENSGGOG00000011444	GNL3	80	47.758	Gorilla_gorilla
ENSXCOG00000018425	gnl3	96	85.714	ENSHBUG00000001340	gnl3	86	85.714	Haplochromis_burtoni
ENSXCOG00000018425	gnl3	95	45.721	ENSHGLG00000018299	GNL3	88	40.535	Heterocephalus_glaber_female
ENSXCOG00000018425	gnl3	95	64.667	ENSHCOG00000009446	gnl3	85	59.958	Hippocampus_comes
ENSXCOG00000018425	gnl3	95	53.725	ENSIPUG00000023677	gnl3	92	49.680	Ictalurus_punctatus
ENSXCOG00000018425	gnl3	94	48.058	ENSSTOG00000000356	GNL3	80	46.014	Ictidomys_tridecemlineatus
ENSXCOG00000018425	gnl3	94	48.775	ENSJJAG00000021993	Gnl3	81	48.423	Jaculus_jaculus
ENSXCOG00000018425	gnl3	95	75.839	ENSKMAG00000005965	gnl3	99	59.484	Kryptolebias_marmoratus
ENSXCOG00000018425	gnl3	95	71.938	ENSLBEG00000011394	gnl3	99	57.326	Labrus_bergylta
ENSXCOG00000018425	gnl3	99	50.862	ENSLACG00000001259	GNL3	87	45.929	Latimeria_chalumnae
ENSXCOG00000018425	gnl3	95	56.541	ENSLOCG00000010542	gnl3	80	56.541	Lepisosteus_oculatus
ENSXCOG00000018425	gnl3	94	47.215	ENSLAFG00000016056	GNL3	79	46.309	Loxodonta_africana
ENSXCOG00000018425	gnl3	95	47.085	ENSMFAG00000000613	GNL3	80	47.085	Macaca_fascicularis
ENSXCOG00000018425	gnl3	94	46.241	ENSMMUG00000012511	GNL3	80	46.241	Macaca_mulatta
ENSXCOG00000018425	gnl3	94	46.469	ENSMNEG00000041979	GNL3	80	46.469	Macaca_nemestrina
ENSXCOG00000018425	gnl3	95	47.309	ENSMLEG00000027696	GNL3	80	47.309	Mandrillus_leucophaeus
ENSXCOG00000018425	gnl3	99	72.258	ENSMAMG00000008904	gnl3	83	72.258	Mastacembelus_armatus
ENSXCOG00000018425	gnl3	96	82.143	ENSMZEG00005014857	gnl3	86	82.143	Maylandia_zebra
ENSXCOG00000018425	gnl3	97	64.454	ENSMZEG00005014957	-	97	64.050	Maylandia_zebra
ENSXCOG00000018425	gnl3	95	41.242	ENSMGAG00000000848	GNL3	73	41.242	Meleagris_gallopavo
ENSXCOG00000018425	gnl3	95	47.573	ENSMAUG00000020178	Gnl3	90	41.273	Mesocricetus_auratus
ENSXCOG00000018425	gnl3	95	46.000	ENSMICG00000016373	GNL3	80	46.000	Microcebus_murinus
ENSXCOG00000018425	gnl3	96	46.444	ENSMOCG00000018437	Gnl3	82	46.444	Microtus_ochrogaster
ENSXCOG00000018425	gnl3	97	71.678	ENSMMOG00000002815	gnl3	88	70.044	Mola_mola
ENSXCOG00000018425	gnl3	95	48.661	ENSMODG00000011257	GNL3	88	43.852	Monodelphis_domestica
ENSXCOG00000018425	gnl3	91	72.558	ENSMALG00000021043	gnl3	99	62.062	Monopterus_albus
ENSXCOG00000018425	gnl3	96	46.341	MGP_CAROLIEiJ_G0019063	Gnl3	82	46.341	Mus_caroli
ENSXCOG00000018425	gnl3	96	46.341	ENSMUSG00000042354	Gnl3	100	57.047	Mus_musculus
ENSXCOG00000018425	gnl3	96	45.676	MGP_PahariEiJ_G0030080	Gnl3	82	45.676	Mus_pahari
ENSXCOG00000018425	gnl3	96	46.563	MGP_SPRETEiJ_G0019948	Gnl3	82	46.563	Mus_spretus
ENSXCOG00000018425	gnl3	95	46.000	ENSMPUG00000016777	GNL3	88	42.798	Mustela_putorius_furo
ENSXCOG00000018425	gnl3	95	49.272	ENSMLUG00000000728	GNL3	80	47.072	Myotis_lucifugus
ENSXCOG00000018425	gnl3	94	47.202	ENSNGAG00000017202	Gnl3	81	46.532	Nannospalax_galili
ENSXCOG00000018425	gnl3	97	66.514	ENSNBRG00000013161	gnl3	97	65.342	Neolamprologus_brichardi
ENSXCOG00000018425	gnl3	95	47.309	ENSNLEG00000007173	GNL3	80	47.309	Nomascus_leucogenys
ENSXCOG00000018425	gnl3	99	37.684	ENSMEUG00000011502	-	99	37.053	Notamacropus_eugenii
ENSXCOG00000018425	gnl3	75	43.492	ENSOPRG00000009356	GNL3	73	43.252	Ochotona_princeps
ENSXCOG00000018425	gnl3	95	47.002	ENSODEG00000009492	GNL3	80	46.847	Octodon_degus
ENSXCOG00000018425	gnl3	96	75.000	ENSONIG00000019335	gnl3	86	75.000	Oreochromis_niloticus
ENSXCOG00000018425	gnl3	97	47.807	ENSOANG00000013437	GNL3	82	46.711	Ornithorhynchus_anatinus
ENSXCOG00000018425	gnl3	95	47.309	ENSOCUG00000009841	GNL3	80	47.309	Oryctolagus_cuniculus
ENSXCOG00000018425	gnl3	95	69.488	ENSORLG00000016030	gnl3	99	53.631	Oryzias_latipes
ENSXCOG00000018425	gnl3	99	67.957	ENSORLG00020014358	gnl3	99	53.818	Oryzias_latipes_hni
ENSXCOG00000018425	gnl3	95	69.488	ENSORLG00015009489	gnl3	99	54.004	Oryzias_latipes_hsok
ENSXCOG00000018425	gnl3	99	67.742	ENSOMEG00000005462	gnl3	99	55.140	Oryzias_melastigma
ENSXCOG00000018425	gnl3	94	49.637	ENSOGAG00000004101	GNL3	79	47.672	Otolemur_garnettii
ENSXCOG00000018425	gnl3	95	48.438	ENSOARG00000002470	GNL3	88	44.785	Ovis_aries
ENSXCOG00000018425	gnl3	95	47.982	ENSPPAG00000019253	GNL3	80	47.982	Pan_paniscus
ENSXCOG00000018425	gnl3	94	48.544	ENSPPRG00000009550	GNL3	80	47.556	Panthera_pardus
ENSXCOG00000018425	gnl3	94	48.301	ENSPTIG00000009356	GNL3	80	47.333	Panthera_tigris_altaica
ENSXCOG00000018425	gnl3	95	47.982	ENSPTRG00000015009	GNL3	80	47.982	Pan_troglodytes
ENSXCOG00000018425	gnl3	95	44.843	ENSPANG00000016579	GNL3	79	44.843	Papio_anubis
ENSXCOG00000018425	gnl3	95	61.883	ENSPKIG00000024295	gnl3	80	62.022	Paramormyrops_kingsleyae
ENSXCOG00000018425	gnl3	94	51.818	ENSPSIG00000011486	GNL3	79	51.818	Pelodiscus_sinensis
ENSXCOG00000018425	gnl3	96	67.188	ENSPMGG00000008210	gnl3	97	63.063	Periophthalmus_magnuspinnatus
ENSXCOG00000018425	gnl3	96	45.898	ENSPEMG00000017577	Gnl3	84	45.898	Peromyscus_maniculatus_bairdii
ENSXCOG00000018425	gnl3	96	49.333	ENSPCIG00000018642	GNL3	78	48.000	Phascolarctos_cinereus
ENSXCOG00000018425	gnl3	99	88.961	ENSPFOG00000017601	gnl3	86	88.961	Poecilia_formosa
ENSXCOG00000018425	gnl3	99	88.745	ENSPLAG00000016968	gnl3	83	88.745	Poecilia_latipinna
ENSXCOG00000018425	gnl3	99	82.869	ENSPMEG00000018775	gnl3	100	74.004	Poecilia_mexicana
ENSXCOG00000018425	gnl3	99	83.726	ENSPREG00000002909	gnl3	100	76.482	Poecilia_reticulata
ENSXCOG00000018425	gnl3	95	47.309	ENSPPYG00000013800	GNL3	79	47.309	Pongo_abelii
ENSXCOG00000018425	gnl3	94	46.875	ENSPCAG00000002006	GNL3	80	45.638	Procavia_capensis
ENSXCOG00000018425	gnl3	95	47.758	ENSPCOG00000026637	GNL3	80	48.322	Propithecus_coquereli
ENSXCOG00000018425	gnl3	95	48.804	ENSPVAG00000012586	GNL3	80	47.640	Pteropus_vampyrus
ENSXCOG00000018425	gnl3	100	60.692	ENSPNYG00000005130	gnl3	97	60.692	Pundamilia_nyererei
ENSXCOG00000018425	gnl3	94	57.753	ENSPNAG00000013096	gnl3	87	50.713	Pygocentrus_nattereri
ENSXCOG00000018425	gnl3	96	46.000	ENSRNOG00000028461	Gnl3	89	43.033	Rattus_norvegicus
ENSXCOG00000018425	gnl3	95	47.085	ENSRBIG00000031778	GNL3	80	47.085	Rhinopithecus_bieti
ENSXCOG00000018425	gnl3	95	47.085	ENSRROG00000030086	GNL3	80	47.085	Rhinopithecus_roxellana
ENSXCOG00000018425	gnl3	95	47.111	ENSSBOG00000019990	GNL3	81	47.111	Saimiri_boliviensis_boliviensis
ENSXCOG00000018425	gnl3	95	48.775	ENSSHAG00000006141	GNL3	80	47.439	Sarcophilus_harrisii
ENSXCOG00000018425	gnl3	96	60.889	ENSSFOG00015021228	gnl3	81	60.889	Scleropages_formosus
ENSXCOG00000018425	gnl3	95	70.759	ENSSMAG00000006662	gnl3	99	54.679	Scophthalmus_maximus
ENSXCOG00000018425	gnl3	99	70.323	ENSSDUG00000000972	gnl3	99	55.738	Seriola_dumerili
ENSXCOG00000018425	gnl3	99	71.183	ENSSLDG00000008692	gnl3	77	71.183	Seriola_lalandi_dorsalis
ENSXCOG00000018425	gnl3	95	44.966	ENSSARG00000002226	GNL3	82	44.966	Sorex_araneus
ENSXCOG00000018425	gnl3	95	50.711	ENSSPUG00000003582	GNL3	78	50.552	Sphenodon_punctatus
ENSXCOG00000018425	gnl3	96	83.871	ENSSPAG00000020180	gnl3	86	83.871	Stegastes_partitus
ENSXCOG00000018425	gnl3	95	47.215	ENSSSCG00000011449	GNL3	79	46.637	Sus_scrofa
ENSXCOG00000018425	gnl3	95	52.232	ENSTGUG00000005774	GNL3	80	52.232	Taeniopygia_guttata
ENSXCOG00000018425	gnl3	98	64.440	ENSTRUG00000005552	gnl3	100	49.907	Takifugu_rubripes
ENSXCOG00000018425	gnl3	95	65.402	ENSTNIG00000007263	gnl3	99	50.820	Tetraodon_nigroviridis
ENSXCOG00000018425	gnl3	93	44.647	ENSTBEG00000017518	GNL3	80	44.647	Tupaia_belangeri
ENSXCOG00000018425	gnl3	55	75.000	ENSTTRG00000008574	-	100	35.112	Tursiops_truncatus
ENSXCOG00000018425	gnl3	99	43.064	ENSUAMG00000012347	GNL3	82	45.759	Ursus_americanus
ENSXCOG00000018425	gnl3	99	42.975	ENSUMAG00000021001	GNL3	80	45.305	Ursus_maritimus
ENSXCOG00000018425	gnl3	96	46.018	ENSVVUG00000024536	-	96	51.493	Vulpes_vulpes
ENSXCOG00000018425	gnl3	99	93.723	ENSXMAG00000022565	gnl3	83	93.723	Xiphophorus_maculatus