EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018547 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 32669 bases
Position: chrKQ557222.1:6776167-6808835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024845	zf-met	PF12874.7	3.7e-26	1	4
ENSXCOP00000024845	zf-met	PF12874.7	3.7e-26	2	4
ENSXCOP00000024845	zf-met	PF12874.7	3.7e-26	3	4
ENSXCOP00000024845	zf-met	PF12874.7	3.7e-26	4	4
ENSXCOP00000024845	zf-C2H2_jaz	PF12171.8	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025146	-	1272	-	ENSXCOP00000024845	423 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018547	-	86	37.135	ENSXCOG00000006303	-	80	37.666
ENSXCOG00000018547	-	57	48.548	ENSXCOG00000001430	znf385a	73	45.643
ENSXCOG00000018547	-	51	53.670	ENSXCOG00000020124	ZNF385D	73	53.488
ENSXCOG00000018547	-	84	52.941	ENSXCOG00000007312	znf385d	73	52.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018547	-	84	64.664	ENSG00000144331	ZNF385B	89	62.551	Homo_sapiens
ENSXCOG00000018547	-	84	63.251	ENSAMEG00000000330	ZNF385B	87	55.556	Ailuropoda_melanoleuca
ENSXCOG00000018547	-	89	63.702	ENSACIG00000020033	znf385b	82	67.342	Amphilophus_citrinellus
ENSXCOG00000018547	-	83	70.822	ENSAOCG00000023028	-	80	69.122	Amphiprion_ocellaris
ENSXCOG00000018547	-	85	56.369	ENSAPEG00000002636	znf385b	75	55.496	Amphiprion_percula
ENSXCOG00000018547	-	85	57.219	ENSAPLG00000003705	ZNF385B	79	57.219	Anas_platyrhynchos
ENSXCOG00000018547	-	84	58.621	ENSACAG00000017419	ZNF385B	70	60.000	Anolis_carolinensis
ENSXCOG00000018547	-	84	65.018	ENSANAG00000024683	ZNF385B	79	55.164	Aotus_nancymaae
ENSXCOG00000018547	-	83	73.077	ENSACLG00000025387	znf385b	59	95.489	Astatotilapia_calliptera
ENSXCOG00000018547	-	85	53.922	ENSBTAG00000003120	ZNF385B	79	55.416	Bos_taurus
ENSXCOG00000018547	-	84	64.664	ENSCJAG00000021534	ZNF385B	74	63.251	Callithrix_jacchus
ENSXCOG00000018547	-	85	56.171	ENSCAFG00000014146	ZNF385B	79	55.416	Canis_familiaris
ENSXCOG00000018547	-	84	63.958	ENSCAFG00020007213	ZNF385B	66	62.898	Canis_lupus_dingo
ENSXCOG00000018547	-	84	63.415	ENSCHIG00000024559	ZNF385B	63	63.958	Capra_hircus
ENSXCOG00000018547	-	84	65.371	ENSTSYG00000012455	ZNF385B	74	63.958	Carlito_syrichta
ENSXCOG00000018547	-	84	64.184	ENSCAPG00000006989	ZNF385B	79	54.731	Cavia_aperea
ENSXCOG00000018547	-	84	64.184	ENSCPOG00000014985	ZNF385B	74	62.816	Cavia_porcellus
ENSXCOG00000018547	-	84	65.018	ENSCCAG00000036046	ZNF385B	74	63.251	Cebus_capucinus
ENSXCOG00000018547	-	84	63.986	ENSCATG00000024097	ZNF385B	79	55.668	Cercocebus_atys
ENSXCOG00000018547	-	84	62.937	ENSCLAG00000014955	-	74	62.191	Chinchilla_lanigera
ENSXCOG00000018547	-	85	51.832	ENSCLAG00000004029	-	80	50.660	Chinchilla_lanigera
ENSXCOG00000018547	-	84	65.018	ENSCSAG00000012932	ZNF385B	74	63.958	Chlorocebus_sabaeus
ENSXCOG00000018547	-	83	56.812	ENSCHOG00000011835	ZNF385B	90	55.584	Choloepus_hoffmanni
ENSXCOG00000018547	-	85	55.867	ENSCPBG00000001823	ZNF385B	77	55.102	Chrysemys_picta_bellii
ENSXCOG00000018547	-	84	65.018	ENSCANG00000001510	ZNF385B	74	63.958	Colobus_angolensis_palliatus
ENSXCOG00000018547	-	84	63.066	ENSCGRG00001019414	Zfp385b	80	54.135	Cricetulus_griseus_chok1gshd
ENSXCOG00000018547	-	84	63.066	ENSCGRG00000003988	Zfp385b	74	62.898	Cricetulus_griseus_crigri
ENSXCOG00000018547	-	63	45.548	ENSDNOG00000044257	-	75	44.853	Dasypus_novemcinctus
ENSXCOG00000018547	-	84	61.702	ENSDNOG00000019250	-	80	61.088	Dasypus_novemcinctus
ENSXCOG00000018547	-	84	64.664	ENSDORG00000011958	Zfp385b	61	61.972	Dipodomys_ordii
ENSXCOG00000018547	-	64	76.699	ENSETEG00000005523	ZNF385B	56	76.699	Echinops_telfairi
ENSXCOG00000018547	-	54	44.915	ENSEBUG00000009311	ZNF385B	83	44.068	Eptatretus_burgeri
ENSXCOG00000018547	-	86	42.525	ENSEBUG00000014383	-	66	41.818	Eptatretus_burgeri
ENSXCOG00000018547	-	61	44.751	ENSEBUG00000002213	-	75	41.758	Eptatretus_burgeri
ENSXCOG00000018547	-	84	64.311	ENSEASG00005022300	ZNF385B	69	63.251	Equus_asinus_asinus
ENSXCOG00000018547	-	84	64.311	ENSECAG00000000538	ZNF385B	70	63.251	Equus_caballus
ENSXCOG00000018547	-	71	70.000	ENSEEUG00000007950	ZNF385B	69	70.000	Erinaceus_europaeus
ENSXCOG00000018547	-	95	51.907	ENSELUG00000006932	-	85	78.523	Esox_lucius
ENSXCOG00000018547	-	86	50.564	ENSELUG00000010611	znf385b	57	78.378	Esox_lucius
ENSXCOG00000018547	-	84	63.509	ENSFCAG00000026511	ZNF385B	74	62.456	Felis_catus
ENSXCOG00000018547	-	85	54.447	ENSFALG00000003483	ZNF385B	76	55.928	Ficedula_albicollis
ENSXCOG00000018547	-	84	61.356	ENSFDAG00000021322	ZNF385B	79	55.164	Fukomys_damarensis
ENSXCOG00000018547	-	76	92.908	ENSFHEG00000009602	znf385b	61	92.908	Fundulus_heteroclitus
ENSXCOG00000018547	-	84	65.217	ENSGALG00000009012	ZNF385B	70	64.855	Gallus_gallus
ENSXCOG00000018547	-	85	55.596	ENSGALG00000011283	-	70	55.435	Gallus_gallus
ENSXCOG00000018547	-	85	79.200	ENSGAFG00000021154	znf385b	62	98.621	Gambusia_affinis
ENSXCOG00000018547	-	87	61.671	ENSGACG00000002075	znf385b	86	62.563	Gasterosteus_aculeatus
ENSXCOG00000018547	-	84	61.324	ENSGAGG00000007880	ZNF385B	78	58.466	Gopherus_agassizii
ENSXCOG00000018547	-	84	65.018	ENSGGOG00000008716	ZNF385B	74	63.958	Gorilla_gorilla
ENSXCOG00000018547	-	84	64.311	ENSHGLG00000004054	ZNF385B	74	61.972	Heterocephalus_glaber_female
ENSXCOG00000018547	-	84	64.311	ENSHGLG00100011134	ZNF385B	74	63.251	Heterocephalus_glaber_male
ENSXCOG00000018547	-	54	52.321	ENSHCOG00000004144	-	70	51.739	Hippocampus_comes
ENSXCOG00000018547	-	85	53.056	ENSIPUG00000005866	znf385b	79	53.616	Ictalurus_punctatus
ENSXCOG00000018547	-	84	64.311	ENSSTOG00000009646	ZNF385B	74	62.898	Ictidomys_tridecemlineatus
ENSXCOG00000018547	-	84	64.029	ENSJJAG00000011065	Zfp385b	85	53.634	Jaculus_jaculus
ENSXCOG00000018547	-	85	92.537	ENSLBEG00000020454	znf385b	62	82.822	Labrus_bergylta
ENSXCOG00000018547	-	84	62.278	ENSLACG00000010531	ZNF385B	70	61.290	Latimeria_chalumnae
ENSXCOG00000018547	-	85	56.171	ENSLAFG00000016135	ZNF385B	79	54.912	Loxodonta_africana
ENSXCOG00000018547	-	84	63.986	ENSMFAG00000043013	ZNF385B	74	63.604	Macaca_fascicularis
ENSXCOG00000018547	-	84	63.986	ENSMMUG00000003855	ZNF385B	74	63.604	Macaca_mulatta
ENSXCOG00000018547	-	84	63.986	ENSMNEG00000033615	ZNF385B	74	63.604	Macaca_nemestrina
ENSXCOG00000018547	-	84	63.986	ENSMLEG00000034603	ZNF385B	74	63.604	Mandrillus_leucophaeus
ENSXCOG00000018547	-	84	69.110	ENSMAMG00000018932	znf385b	79	68.421	Mastacembelus_armatus
ENSXCOG00000018547	-	84	64.539	ENSMGAG00000009267	ZNF385B	71	64.493	Meleagris_gallopavo
ENSXCOG00000018547	-	84	63.028	ENSMAUG00000017440	Zfp385b	74	61.972	Mesocricetus_auratus
ENSXCOG00000018547	-	84	65.018	ENSMICG00000016924	ZNF385B	74	63.604	Microcebus_murinus
ENSXCOG00000018547	-	84	64.664	ENSMOCG00000006938	Zfp385b	74	63.251	Microtus_ochrogaster
ENSXCOG00000018547	-	83	72.826	ENSMMOG00000019718	znf385b	79	70.523	Mola_mola
ENSXCOG00000018547	-	84	63.194	ENSMODG00000010201	ZNF385B	70	62.411	Monodelphis_domestica
ENSXCOG00000018547	-	84	61.905	ENSMALG00000001871	-	63	83.648	Monopterus_albus
ENSXCOG00000018547	-	84	62.887	MGP_CAROLIEiJ_G0023695	Zfp385b	74	62.544	Mus_caroli
ENSXCOG00000018547	-	84	62.543	ENSMUSG00000027016	Zfp385b	74	62.191	Mus_musculus
ENSXCOG00000018547	-	84	63.958	MGP_PahariEiJ_G0025146	Zfp385b	74	63.251	Mus_pahari
ENSXCOG00000018547	-	84	62.887	MGP_SPRETEiJ_G0024616	Zfp385b	74	62.544	Mus_spretus
ENSXCOG00000018547	-	85	52.381	ENSMPUG00000002440	ZNF385B	80	51.667	Mustela_putorius_furo
ENSXCOG00000018547	-	84	63.732	ENSMLUG00000013424	ZNF385B	71	62.898	Myotis_lucifugus
ENSXCOG00000018547	-	84	63.958	ENSNGAG00000010574	Zfp385b	74	63.604	Nannospalax_galili
ENSXCOG00000018547	-	84	66.935	ENSNBRG00000019339	ZNF385B	85	70.219	Neolamprologus_brichardi
ENSXCOG00000018547	-	84	65.018	ENSNLEG00000006238	ZNF385B	74	63.958	Nomascus_leucogenys
ENSXCOG00000018547	-	76	47.507	ENSMEUG00000010020	ZNF385B	69	46.903	Notamacropus_eugenii
ENSXCOG00000018547	-	53	69.444	ENSOPRG00000005865	ZNF385B	55	59.223	Ochotona_princeps
ENSXCOG00000018547	-	89	53.035	ENSODEG00000012465	ZNF385B	78	50.794	Octodon_degus
ENSXCOG00000018547	-	85	66.262	ENSONIG00000006893	znf385b	85	63.146	Oreochromis_niloticus
ENSXCOG00000018547	-	85	51.059	ENSOANG00000008647	ZNF385B	79	48.372	Ornithorhynchus_anatinus
ENSXCOG00000018547	-	84	63.830	ENSOCUG00000004877	ZNF385B	70	63.251	Oryctolagus_cuniculus
ENSXCOG00000018547	-	84	72.386	ENSOMEG00000015261	znf385b	80	70.352	Oryzias_melastigma
ENSXCOG00000018547	-	84	61.486	ENSOGAG00000008520	ZNF385B	79	53.788	Otolemur_garnettii
ENSXCOG00000018547	-	84	63.415	ENSOARG00000016924	ZNF385B	71	63.958	Ovis_aries
ENSXCOG00000018547	-	84	65.018	ENSPPAG00000035510	ZNF385B	74	63.958	Pan_paniscus
ENSXCOG00000018547	-	84	63.158	ENSPPRG00000001753	ZNF385B	74	62.105	Panthera_pardus
ENSXCOG00000018547	-	84	63.860	ENSPTIG00000020003	ZNF385B	63	62.105	Panthera_tigris_altaica
ENSXCOG00000018547	-	84	65.018	ENSPTRG00000012696	ZNF385B	74	63.958	Pan_troglodytes
ENSXCOG00000018547	-	84	63.986	ENSPANG00000004252	ZNF385B	79	55.668	Papio_anubis
ENSXCOG00000018547	-	85	55.990	ENSPKIG00000021255	znf385b	80	53.435	Paramormyrops_kingsleyae
ENSXCOG00000018547	-	85	55.155	ENSPSIG00000008641	ZNF385B	72	54.220	Pelodiscus_sinensis
ENSXCOG00000018547	-	84	64.664	ENSPEMG00000011546	Zfp385b	74	65.108	Peromyscus_maniculatus_bairdii
ENSXCOG00000018547	-	73	45.641	ENSPMAG00000004000	-	100	64.130	Petromyzon_marinus
ENSXCOG00000018547	-	62	51.773	ENSPMAG00000005906	znf385b	81	48.148	Petromyzon_marinus
ENSXCOG00000018547	-	86	46.416	ENSPMAG00000002991	-	82	45.392	Petromyzon_marinus
ENSXCOG00000018547	-	84	65.591	ENSPCIG00000011178	ZNF385B	69	62.057	Phascolarctos_cinereus
ENSXCOG00000018547	-	52	59.761	ENSPFOG00000015103	znf385b	78	98.611	Poecilia_formosa
ENSXCOG00000018547	-	52	59.761	ENSPLAG00000021353	-	79	98.611	Poecilia_latipinna
ENSXCOG00000018547	-	85	75.610	ENSPREG00000004272	znf385b	77	75.342	Poecilia_reticulata
ENSXCOG00000018547	-	85	56.397	ENSPPYG00000012984	ZNF385B	79	56.658	Pongo_abelii
ENSXCOG00000018547	-	85	55.000	ENSPCAG00000000584	ZNF385B	79	55.352	Procavia_capensis
ENSXCOG00000018547	-	84	65.018	ENSPCOG00000024514	ZNF385B	74	63.604	Propithecus_coquereli
ENSXCOG00000018547	-	67	74.359	ENSPVAG00000011496	ZNF385B	62	74.359	Pteropus_vampyrus
ENSXCOG00000018547	-	83	68.067	ENSPNYG00000010394	znf385b	81	68.286	Pundamilia_nyererei
ENSXCOG00000018547	-	84	63.230	ENSRNOG00000019065	Zfp385b	69	62.898	Rattus_norvegicus
ENSXCOG00000018547	-	84	65.018	ENSRBIG00000043516	ZNF385B	74	63.958	Rhinopithecus_bieti
ENSXCOG00000018547	-	84	65.018	ENSRROG00000003706	ZNF385B	74	63.958	Rhinopithecus_roxellana
ENSXCOG00000018547	-	84	65.018	ENSSBOG00000033350	ZNF385B	74	63.251	Saimiri_boliviensis_boliviensis
ENSXCOG00000018547	-	84	61.356	ENSSHAG00000015010	ZNF385B	81	62.411	Sarcophilus_harrisii
ENSXCOG00000018547	-	81	53.937	ENSSFOG00015021104	-	80	54.365	Scleropages_formosus
ENSXCOG00000018547	-	62	65.428	ENSSFOG00015011882	znf385b	67	62.406	Scleropages_formosus
ENSXCOG00000018547	-	60	49.810	ENSSFOG00015014622	-	69	48.669	Scleropages_formosus
ENSXCOG00000018547	-	83	52.660	ENSSFOG00015011689	-	81	52.660	Scleropages_formosus
ENSXCOG00000018547	-	86	61.205	ENSSMAG00000004759	znf385b	90	64.815	Scophthalmus_maximus
ENSXCOG00000018547	-	85	96.350	ENSSLDG00000023206	znf385b	73	66.580	Seriola_lalandi_dorsalis
ENSXCOG00000018547	-	82	48.000	ENSSARG00000005573	ZNF385B	93	48.000	Sorex_araneus
ENSXCOG00000018547	-	84	62.807	ENSSPUG00000006364	ZNF385B	70	61.348	Sphenodon_punctatus
ENSXCOG00000018547	-	85	66.839	ENSSPAG00000008778	-	82	68.718	Stegastes_partitus
ENSXCOG00000018547	-	84	63.889	ENSSSCG00000023181	ZNF385B	62	62.898	Sus_scrofa
ENSXCOG00000018547	-	85	55.388	ENSTGUG00000009316	ZNF385B	80	55.385	Taeniopygia_guttata
ENSXCOG00000018547	-	83	64.208	ENSTRUG00000014480	znf385b	89	63.612	Takifugu_rubripes
ENSXCOG00000018547	-	62	73.063	ENSTNIG00000005547	znf385b	80	71.642	Tetraodon_nigroviridis
ENSXCOG00000018547	-	83	56.836	ENSTBEG00000013865	ZNF385B	90	56.604	Tupaia_belangeri
ENSXCOG00000018547	-	85	55.779	ENSTTRG00000006824	ZNF385B	79	55.779	Tursiops_truncatus
ENSXCOG00000018547	-	84	63.830	ENSUMAG00000016683	ZNF385B	76	62.724	Ursus_maritimus
ENSXCOG00000018547	-	83	54.545	ENSVPAG00000003514	ZNF385B	77	55.440	Vicugna_pacos
ENSXCOG00000018547	-	84	64.516	ENSVVUG00000009783	ZNF385B	71	63.441	Vulpes_vulpes
ENSXCOG00000018547	-	84	66.065	ENSXETG00000015059	znf385b	70	62.044	Xenopus_tropicalis
ENSXCOG00000018547	-	51	59.919	ENSXMAG00000001492	znf385b	68	82.258	Xiphophorus_maculatus