EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018615 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3360 bases
Position: chrKQ557203.1:21206921-21210280
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000024931	zf-C2H2	PF00096.26	3.1e-14	1	2
ENSXCOP00000024931	zf-C2H2	PF00096.26	3.1e-14	2	2
ENSXCOP00000024931	zf-met	PF12874.7	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025235	-	387	-	ENSXCOP00000024931	128 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018615	-	96	45.545	ENSXCOG00000007979	-	61	45.545
ENSXCOG00000018615	-	98	46.341	ENSXCOG00000011725	-	96	41.964
ENSXCOG00000018615	-	89	53.226	ENSXCOG00000008062	-	95	50.000
ENSXCOG00000018615	-	93	47.561	ENSXCOG00000001116	-	91	47.561
ENSXCOG00000018615	-	98	41.667	ENSXCOG00000009665	-	85	41.667
ENSXCOG00000018615	-	100	33.962	ENSXCOG00000009668	-	68	44.444
ENSXCOG00000018615	-	92	39.759	ENSXCOG00000013066	-	68	39.759
ENSXCOG00000018615	-	70	52.381	ENSXCOG00000009674	-	74	52.381
ENSXCOG00000018615	-	100	47.273	ENSXCOG00000016567	-	76	47.273
ENSXCOG00000018615	-	98	54.762	ENSXCOG00000007529	-	99	54.762
ENSXCOG00000018615	-	95	48.438	ENSXCOG00000019484	-	89	45.098
ENSXCOG00000018615	-	95	42.727	ENSXCOG00000019482	-	82	42.727
ENSXCOG00000018615	-	96	45.570	ENSXCOG00000019481	-	81	45.570
ENSXCOG00000018615	-	91	37.963	ENSXCOG00000003435	-	61	37.963
ENSXCOG00000018615	-	86	43.636	ENSXCOG00000013306	-	56	43.636
ENSXCOG00000018615	-	95	45.946	ENSXCOG00000002473	-	89	45.946
ENSXCOG00000018615	-	100	44.144	ENSXCOG00000015441	-	88	44.144
ENSXCOG00000018615	-	70	48.718	ENSXCOG00000011372	-	59	48.718
ENSXCOG00000018615	-	100	43.089	ENSXCOG00000007368	-	93	43.089
ENSXCOG00000018615	-	86	44.444	ENSXCOG00000014363	-	61	44.444
ENSXCOG00000018615	-	98	44.248	ENSXCOG00000007406	-	98	41.441
ENSXCOG00000018615	-	86	41.304	ENSXCOG00000010488	-	51	41.304
ENSXCOG00000018615	-	86	45.098	ENSXCOG00000007139	-	71	45.055
ENSXCOG00000018615	-	86	40.659	ENSXCOG00000003896	-	66	40.659
ENSXCOG00000018615	-	86	41.758	ENSXCOG00000009794	-	71	41.758
ENSXCOG00000018615	-	84	37.736	ENSXCOG00000003493	-	62	37.736
ENSXCOG00000018615	-	88	38.318	ENSXCOG00000008567	prdm5	73	38.318
ENSXCOG00000018615	-	97	49.057	ENSXCOG00000009003	-	85	49.057
ENSXCOG00000018615	-	91	44.318	ENSXCOG00000019382	-	76	44.318
ENSXCOG00000018615	-	98	38.393	ENSXCOG00000000528	-	84	37.838
ENSXCOG00000018615	-	86	36.036	ENSXCOG00000009781	-	60	36.036
ENSXCOG00000018615	-	88	39.773	ENSXCOG00000009785	-	63	39.773
ENSXCOG00000018615	-	84	36.641	ENSXCOG00000018315	-	73	36.641
ENSXCOG00000018615	-	86	39.640	ENSXCOG00000010259	-	51	39.640
ENSXCOG00000018615	-	86	43.750	ENSXCOG00000009777	-	54	43.750
ENSXCOG00000018615	-	86	37.363	ENSXCOG00000009772	-	72	37.363
ENSXCOG00000018615	-	96	49.451	ENSXCOG00000016860	-	99	49.451
ENSXCOG00000018615	-	89	45.833	ENSXCOG00000009992	zbtb47b	67	45.833
ENSXCOG00000018615	-	89	43.363	ENSXCOG00000013004	-	73	43.363
ENSXCOG00000018615	-	86	48.529	ENSXCOG00000002898	-	84	39.394
ENSXCOG00000018615	-	88	39.560	ENSXCOG00000009597	ZNF319	62	39.560
ENSXCOG00000018615	-	96	44.144	ENSXCOG00000007945	-	88	44.144
ENSXCOG00000018615	-	100	42.202	ENSXCOG00000019401	-	85	42.202
ENSXCOG00000018615	-	85	40.506	ENSXCOG00000002714	-	53	40.506
ENSXCOG00000018615	-	99	42.593	ENSXCOG00000019457	-	91	42.593
ENSXCOG00000018615	-	95	42.342	ENSXCOG00000007941	-	87	42.342
ENSXCOG00000018615	-	100	42.727	ENSXCOG00000003530	-	74	47.273
ENSXCOG00000018615	-	86	39.091	ENSXCOG00000003532	-	72	39.091
ENSXCOG00000018615	-	86	40.000	ENSXCOG00000003537	-	74	38.095
ENSXCOG00000018615	-	88	44.318	ENSXCOG00000003538	-	97	44.318
ENSXCOG00000018615	-	97	38.889	ENSXCOG00000003472	-	81	38.889
ENSXCOG00000018615	-	95	39.796	ENSXCOG00000007499	zbtb41	53	39.796
ENSXCOG00000018615	-	86	39.048	ENSXCOG00000006553	-	84	39.048
ENSXCOG00000018615	-	86	43.902	ENSXCOG00000009798	-	67	43.902
ENSXCOG00000018615	-	70	40.449	ENSXCOG00000020769	-	73	40.449
ENSXCOG00000018615	-	87	38.393	ENSXCOG00000020768	-	68	38.393
ENSXCOG00000018615	-	100	42.727	ENSXCOG00000001200	-	93	42.727
ENSXCOG00000018615	-	86	44.444	ENSXCOG00000003093	-	82	44.444
ENSXCOG00000018615	-	100	48.352	ENSXCOG00000007994	-	89	42.609
ENSXCOG00000018615	-	86	45.556	ENSXCOG00000015947	-	92	45.556
ENSXCOG00000018615	-	88	43.925	ENSXCOG00000016307	-	83	45.122
ENSXCOG00000018615	-	88	37.963	ENSXCOG00000007413	-	57	37.963
ENSXCOG00000018615	-	97	40.909	ENSXCOG00000007414	-	91	40.909
ENSXCOG00000018615	-	88	56.604	ENSXCOG00000017328	-	77	44.444
ENSXCOG00000018615	-	86	50.000	ENSXCOG00000002512	-	78	50.000
ENSXCOG00000018615	-	86	43.038	ENSXCOG00000008083	-	92	40.541
ENSXCOG00000018615	-	89	40.217	ENSXCOG00000006951	-	71	40.217
ENSXCOG00000018615	-	93	42.045	ENSXCOG00000010567	-	88	43.373
ENSXCOG00000018615	-	95	40.000	ENSXCOG00000007076	-	99	40.000
ENSXCOG00000018615	-	88	42.169	ENSXCOG00000014361	-	57	42.169
ENSXCOG00000018615	-	95	49.451	ENSXCOG00000008116	-	81	46.226
ENSXCOG00000018615	-	91	45.055	ENSXCOG00000017871	zgc:113343	66	45.055
ENSXCOG00000018615	-	88	44.828	ENSXCOG00000003451	-	82	42.857
ENSXCOG00000018615	-	89	38.202	ENSXCOG00000003001	-	74	38.202
ENSXCOG00000018615	-	98	52.830	ENSXCOG00000000254	-	68	52.830
ENSXCOG00000018615	-	86	47.059	ENSXCOG00000008978	-	92	47.059
ENSXCOG00000018615	-	59	38.961	ENSXCOG00000015435	-	67	38.961
ENSXCOG00000018615	-	86	41.441	ENSXCOG00000007937	-	75	41.441
ENSXCOG00000018615	-	94	41.441	ENSXCOG00000010576	-	73	41.441
ENSXCOG00000018615	-	100	56.098	ENSXCOG00000019443	-	96	44.318
ENSXCOG00000018615	-	86	44.144	ENSXCOG00000000354	-	70	44.144
ENSXCOG00000018615	-	84	41.463	ENSXCOG00000009186	-	87	41.463
ENSXCOG00000018615	-	90	43.243	ENSXCOG00000016117	-	99	43.243
ENSXCOG00000018615	-	84	38.835	ENSXCOG00000015084	snai2	51	38.835
ENSXCOG00000018615	-	89	46.018	ENSXCOG00000001292	-	84	46.018
ENSXCOG00000018615	-	88	42.857	ENSXCOG00000007396	-	86	42.857
ENSXCOG00000018615	-	97	43.529	ENSXCOG00000003484	-	57	43.529
ENSXCOG00000018615	-	86	42.308	ENSXCOG00000012921	-	96	38.532
ENSXCOG00000018615	-	89	38.947	ENSXCOG00000012924	-	95	38.947
ENSXCOG00000018615	-	86	52.381	ENSXCOG00000010950	si:dkey-210j14.3	50	52.381
ENSXCOG00000018615	-	86	43.939	ENSXCOG00000019492	-	87	43.939
ENSXCOG00000018615	-	97	44.318	ENSXCOG00000001226	-	87	44.318
ENSXCOG00000018615	-	97	42.857	ENSXCOG00000006614	-	91	38.393
ENSXCOG00000018615	-	97	40.179	ENSXCOG00000015312	-	86	40.179
ENSXCOG00000018615	-	91	55.000	ENSXCOG00000007981	-	90	39.815
ENSXCOG00000018615	-	96	44.681	ENSXCOG00000007987	-	76	41.758
ENSXCOG00000018615	-	63	51.923	ENSXCOG00000007420	-	95	51.923
ENSXCOG00000018615	-	88	40.741	ENSXCOG00000003431	-	80	40.741
ENSXCOG00000018615	-	98	36.036	ENSXCOG00000007376	-	92	41.463
ENSXCOG00000018615	-	89	39.815	ENSXCOG00000018253	-	92	39.815
ENSXCOG00000018615	-	96	42.593	ENSXCOG00000019377	-	92	42.593
ENSXCOG00000018615	-	86	45.455	ENSXCOG00000002857	-	93	41.053
ENSXCOG00000018615	-	65	44.444	ENSXCOG00000015428	-	60	44.444
ENSXCOG00000018615	-	95	42.342	ENSXCOG00000007957	-	89	47.143
ENSXCOG00000018615	-	86	50.000	ENSXCOG00000012458	-	59	50.000
ENSXCOG00000018615	-	86	37.838	ENSXCOG00000003468	-	79	37.838
ENSXCOG00000018615	-	98	37.037	ENSXCOG00000013870	-	69	37.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018615	-	86	76.224	ENSACAG00000022971	-	98	76.224	Anolis_carolinensis
ENSXCOG00000018615	-	63	65.432	ENSCAPG00000007934	-	81	65.432	Cavia_aperea
ENSXCOG00000018615	-	77	65.657	ENSCPOG00000030326	-	64	65.657	Cavia_porcellus
ENSXCOG00000018615	-	77	65.657	ENSCLAG00000014824	-	71	65.657	Chinchilla_lanigera
ENSXCOG00000018615	-	63	66.667	ENSFDAG00000004155	-	81	66.667	Fukomys_damarensis
ENSXCOG00000018615	-	63	66.667	ENSHGLG00000015654	-	81	66.667	Heterocephalus_glaber_female
ENSXCOG00000018615	-	63	66.667	ENSHGLG00100005041	-	81	66.667	Heterocephalus_glaber_male
ENSXCOG00000018615	-	63	65.432	ENSODEG00000014837	-	81	65.432	Octodon_degus
ENSXCOG00000018615	-	100	95.349	ENSSHAG00000009882	ZBTB16	100	77.778	Sarcophilus_harrisii
ENSXCOG00000018615	-	100	97.674	ENSTNIG00000005798	zbtb16a	51	97.674	Tetraodon_nigroviridis