EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018732 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5827 bases
Position: chrKQ557222.1:9412992-9418818
Accession: ZDB-GENE-040426-1090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025094	RNase_H2-Ydr279	PF09468.10	6.7e-15	1	1
ENSXCOP00000025092	RNase_H2-Ydr279	PF09468.10	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025397	-	900	-	ENSXCOP00000025092	299 (aa)	-	-
ENSXCOT00000025399	-	885	-	ENSXCOP00000025094	294 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018732	rnaseh2b	90	51.471	ENSG00000136104	RNASEH2B	87	64.198	Homo_sapiens
ENSXCOG00000018732	rnaseh2b	100	82.736	ENSAPOG00000010496	rnaseh2b	100	82.736	Acanthochromis_polyacanthus
ENSXCOG00000018732	rnaseh2b	89	50.376	ENSAMEG00000012040	RNASEH2B	92	51.103	Ailuropoda_melanoleuca
ENSXCOG00000018732	rnaseh2b	100	76.190	ENSACIG00000021991	rnaseh2b	100	76.190	Amphilophus_citrinellus
ENSXCOG00000018732	rnaseh2b	100	83.388	ENSAOCG00000013398	rnaseh2b	100	83.388	Amphiprion_ocellaris
ENSXCOG00000018732	rnaseh2b	100	83.062	ENSAPEG00000006033	rnaseh2b	100	83.062	Amphiprion_percula
ENSXCOG00000018732	rnaseh2b	100	81.433	ENSATEG00000008370	rnaseh2b	100	81.433	Anabas_testudineus
ENSXCOG00000018732	rnaseh2b	84	61.200	ENSAPLG00000008955	RNASEH2B	99	60.886	Anas_platyrhynchos
ENSXCOG00000018732	rnaseh2b	92	53.818	ENSACAG00000011679	RNASEH2B	94	53.405	Anolis_carolinensis
ENSXCOG00000018732	rnaseh2b	89	52.091	ENSANAG00000020662	RNASEH2B	86	51.673	Aotus_nancymaae
ENSXCOG00000018732	rnaseh2b	100	78.502	ENSACLG00000000467	rnaseh2b	100	78.502	Astatotilapia_calliptera
ENSXCOG00000018732	rnaseh2b	99	68.078	ENSAMXG00000014351	rnaseh2b	99	68.078	Astyanax_mexicanus
ENSXCOG00000018732	rnaseh2b	87	52.416	ENSBTAG00000020149	RNASEH2B	87	52.416	Bos_taurus
ENSXCOG00000018732	rnaseh2b	88	52.107	ENSCJAG00000008585	-	88	52.788	Callithrix_jacchus
ENSXCOG00000018732	rnaseh2b	70	46.860	ENSCJAG00000003822	-	79	46.948	Callithrix_jacchus
ENSXCOG00000018732	rnaseh2b	87	50.973	ENSCAFG00000004295	RNASEH2B	88	50.558	Canis_familiaris
ENSXCOG00000018732	rnaseh2b	89	49.430	ENSCAFG00020000250	RNASEH2B	88	50.929	Canis_lupus_dingo
ENSXCOG00000018732	rnaseh2b	88	50.958	ENSCHIG00000018220	RNASEH2B	87	51.685	Capra_hircus
ENSXCOG00000018732	rnaseh2b	79	47.414	ENSCHIG00000012982	-	82	47.845	Capra_hircus
ENSXCOG00000018732	rnaseh2b	87	52.529	ENSTSYG00000009176	-	87	52.416	Carlito_syrichta
ENSXCOG00000018732	rnaseh2b	89	44.275	ENSTSYG00000031177	-	87	45.318	Carlito_syrichta
ENSXCOG00000018732	rnaseh2b	87	44.747	ENSCAPG00000009978	RNASEH2B	93	43.431	Cavia_aperea
ENSXCOG00000018732	rnaseh2b	96	47.018	ENSCPOG00000032527	RNASEH2B	92	47.018	Cavia_porcellus
ENSXCOG00000018732	rnaseh2b	89	52.091	ENSCCAG00000026979	RNASEH2B	88	52.434	Cebus_capucinus
ENSXCOG00000018732	rnaseh2b	87	52.344	ENSCATG00000031336	RNASEH2B	74	52.290	Cercocebus_atys
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSCLAG00000003517	RNASEH2B	74	51.301	Chinchilla_lanigera
ENSXCOG00000018732	rnaseh2b	86	51.311	ENSCSAG00000017701	RNASEH2B	81	51.311	Chlorocebus_sabaeus
ENSXCOG00000018732	rnaseh2b	94	41.786	ENSCHOG00000013688	RNASEH2B	91	43.060	Choloepus_hoffmanni
ENSXCOG00000018732	rnaseh2b	99	55.195	ENSCPBG00000008684	RNASEH2B	95	55.195	Chrysemys_picta_bellii
ENSXCOG00000018732	rnaseh2b	83	35.857	ENSCING00000016454	-	81	36.653	Ciona_intestinalis
ENSXCOG00000018732	rnaseh2b	89	51.880	ENSCANG00000041511	-	87	51.838	Colobus_angolensis_palliatus
ENSXCOG00000018732	rnaseh2b	96	50.352	ENSCGRG00001000611	Rnaseh2b	92	50.704	Cricetulus_griseus_chok1gshd
ENSXCOG00000018732	rnaseh2b	96	50.352	ENSCGRG00000006077	Rnaseh2b	92	50.704	Cricetulus_griseus_crigri
ENSXCOG00000018732	rnaseh2b	100	80.612	ENSCSEG00000004910	rnaseh2b	100	80.612	Cynoglossus_semilaevis
ENSXCOG00000018732	rnaseh2b	100	84.039	ENSCVAG00000005212	rnaseh2b	100	84.039	Cyprinodon_variegatus
ENSXCOG00000018732	rnaseh2b	99	66.993	ENSDARG00000005128	rnaseh2b	99	66.993	Danio_rerio
ENSXCOG00000018732	rnaseh2b	89	49.242	ENSDNOG00000049666	-	87	49.259	Dasypus_novemcinctus
ENSXCOG00000018732	rnaseh2b	95	44.326	ENSDNOG00000034290	-	92	44.326	Dasypus_novemcinctus
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSDORG00000010708	Rnaseh2b	86	52.612	Dipodomys_ordii
ENSXCOG00000018732	rnaseh2b	87	37.891	ENSEBUG00000005965	rnaseh2b	97	38.132	Eptatretus_burgeri
ENSXCOG00000018732	rnaseh2b	89	52.852	ENSEASG00005017323	RNASEH2B	86	52.416	Equus_asinus_asinus
ENSXCOG00000018732	rnaseh2b	89	53.232	ENSECAG00000014262	RNASEH2B	86	52.788	Equus_caballus
ENSXCOG00000018732	rnaseh2b	100	73.377	ENSELUG00000019560	rnaseh2b	100	73.377	Esox_lucius
ENSXCOG00000018732	rnaseh2b	87	49.609	ENSFCAG00000014257	RNASEH2B	82	50.382	Felis_catus
ENSXCOG00000018732	rnaseh2b	90	60.674	ENSFALG00000008435	RNASEH2B	94	60.289	Ficedula_albicollis
ENSXCOG00000018732	rnaseh2b	89	50.190	ENSFDAG00000009920	RNASEH2B	93	50.186	Fukomys_damarensis
ENSXCOG00000018732	rnaseh2b	100	87.296	ENSFHEG00000012160	rnaseh2b	100	87.296	Fundulus_heteroclitus
ENSXCOG00000018732	rnaseh2b	100	68.667	ENSGMOG00000016830	rnaseh2b	100	68.667	Gadus_morhua
ENSXCOG00000018732	rnaseh2b	95	57.338	ENSGALG00000017015	RNASEH2B	100	57.792	Gallus_gallus
ENSXCOG00000018732	rnaseh2b	100	94.137	ENSGAFG00000021222	rnaseh2b	100	94.137	Gambusia_affinis
ENSXCOG00000018732	rnaseh2b	100	76.603	ENSGACG00000002821	rnaseh2b	100	76.603	Gasterosteus_aculeatus
ENSXCOG00000018732	rnaseh2b	91	57.706	ENSGAGG00000014722	RNASEH2B	99	57.706	Gopherus_agassizii
ENSXCOG00000018732	rnaseh2b	89	51.504	ENSGGOG00000001044	RNASEH2B	87	51.471	Gorilla_gorilla
ENSXCOG00000018732	rnaseh2b	100	80.272	ENSHBUG00000006049	rnaseh2b	100	80.272	Haplochromis_burtoni
ENSXCOG00000018732	rnaseh2b	89	50.190	ENSHGLG00100015953	RNASEH2B	91	50.186	Heterocephalus_glaber_male
ENSXCOG00000018732	rnaseh2b	100	73.986	ENSHCOG00000003318	rnaseh2b	100	73.986	Hippocampus_comes
ENSXCOG00000018732	rnaseh2b	100	68.506	ENSIPUG00000023815	rnaseh2b	100	68.506	Ictalurus_punctatus
ENSXCOG00000018732	rnaseh2b	89	51.527	ENSSTOG00000015126	RNASEH2B	91	52.612	Ictidomys_tridecemlineatus
ENSXCOG00000018732	rnaseh2b	91	51.838	ENSJJAG00000013335	Rnaseh2b	92	51.838	Jaculus_jaculus
ENSXCOG00000018732	rnaseh2b	100	83.713	ENSKMAG00000002198	rnaseh2b	100	83.713	Kryptolebias_marmoratus
ENSXCOG00000018732	rnaseh2b	100	80.456	ENSLBEG00000019331	rnaseh2b	100	80.456	Labrus_bergylta
ENSXCOG00000018732	rnaseh2b	71	59.906	ENSLACG00000010782	RNASEH2B	92	60.088	Latimeria_chalumnae
ENSXCOG00000018732	rnaseh2b	100	65.909	ENSLOCG00000009296	rnaseh2b	100	65.909	Lepisosteus_oculatus
ENSXCOG00000018732	rnaseh2b	89	51.894	ENSLAFG00000030158	RNASEH2B	87	51.673	Loxodonta_africana
ENSXCOG00000018732	rnaseh2b	89	52.091	ENSMFAG00000038464	-	86	52.045	Macaca_fascicularis
ENSXCOG00000018732	rnaseh2b	89	47.529	ENSMMUG00000021746	RNASEH2B	85	49.254	Macaca_mulatta
ENSXCOG00000018732	rnaseh2b	89	52.091	ENSMNEG00000030580	RNASEH2B	86	52.045	Macaca_nemestrina
ENSXCOG00000018732	rnaseh2b	89	51.504	ENSMLEG00000043911	-	87	51.471	Mandrillus_leucophaeus
ENSXCOG00000018732	rnaseh2b	100	81.107	ENSMAMG00000017109	rnaseh2b	100	81.107	Mastacembelus_armatus
ENSXCOG00000018732	rnaseh2b	100	77.152	ENSMZEG00005021926	rnaseh2b	100	77.152	Maylandia_zebra
ENSXCOG00000018732	rnaseh2b	85	60.456	ENSMGAG00000015025	RNASEH2B	97	60.791	Meleagris_gallopavo
ENSXCOG00000018732	rnaseh2b	87	52.918	ENSMAUG00000016520	Rnaseh2b	87	52.045	Mesocricetus_auratus
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSMICG00000000528	RNASEH2B	87	52.045	Microcebus_murinus
ENSXCOG00000018732	rnaseh2b	99	79.667	ENSMMOG00000019799	rnaseh2b	99	81.338	Mola_mola
ENSXCOG00000018732	rnaseh2b	98	53.465	ENSMODG00000010775	RNASEH2B	99	53.465	Monodelphis_domestica
ENSXCOG00000018732	rnaseh2b	99	81.046	ENSMALG00000004463	rnaseh2b	100	81.046	Monopterus_albus
ENSXCOG00000018732	rnaseh2b	75	54.505	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	55.856	Mus_caroli
ENSXCOG00000018732	rnaseh2b	89	53.612	ENSMUSG00000021932	Rnaseh2b	87	53.532	Mus_musculus
ENSXCOG00000018732	rnaseh2b	89	41.534	MGP_PahariEiJ_G0030407	-	90	41.534	Mus_pahari
ENSXCOG00000018732	rnaseh2b	68	47.619	ENSMPUG00000018010	RNASEH2B	87	47.619	Mustela_putorius_furo
ENSXCOG00000018732	rnaseh2b	89	53.992	ENSMLUG00000004065	-	86	54.275	Myotis_lucifugus
ENSXCOG00000018732	rnaseh2b	100	78.502	ENSNBRG00000003253	rnaseh2b	100	78.502	Neolamprologus_brichardi
ENSXCOG00000018732	rnaseh2b	89	51.504	ENSNLEG00000003804	RNASEH2B	87	51.103	Nomascus_leucogenys
ENSXCOG00000018732	rnaseh2b	90	57.778	ENSMEUG00000003665	RNASEH2B	97	55.830	Notamacropus_eugenii
ENSXCOG00000018732	rnaseh2b	55	52.469	ENSOPRG00000003695	-	51	54.037	Ochotona_princeps
ENSXCOG00000018732	rnaseh2b	91	50.735	ENSODEG00000006793	-	88	50.735	Octodon_degus
ENSXCOG00000018732	rnaseh2b	76	47.368	ENSODEG00000005412	-	91	47.368	Octodon_degus
ENSXCOG00000018732	rnaseh2b	100	77.199	ENSONIG00000006657	rnaseh2b	100	78.502	Oreochromis_niloticus
ENSXCOG00000018732	rnaseh2b	94	54.770	ENSOANG00000015537	RNASEH2B	96	56.272	Ornithorhynchus_anatinus
ENSXCOG00000018732	rnaseh2b	88	50.385	ENSOCUG00000008904	RNASEH2B	85	50.735	Oryctolagus_cuniculus
ENSXCOG00000018732	rnaseh2b	99	75.578	ENSORLG00000011850	rnaseh2b	100	75.578	Oryzias_latipes
ENSXCOG00000018732	rnaseh2b	99	75.578	ENSORLG00020012081	rnaseh2b	100	75.578	Oryzias_latipes_hni
ENSXCOG00000018732	rnaseh2b	99	74.917	ENSORLG00015015468	rnaseh2b	100	74.917	Oryzias_latipes_hsok
ENSXCOG00000018732	rnaseh2b	99	76.898	ENSOMEG00000012441	rnaseh2b	100	76.898	Oryzias_melastigma
ENSXCOG00000018732	rnaseh2b	89	52.632	ENSOGAG00000016486	RNASEH2B	91	53.676	Otolemur_garnettii
ENSXCOG00000018732	rnaseh2b	88	50.958	ENSOARG00000008701	RNASEH2B	90	51.685	Ovis_aries
ENSXCOG00000018732	rnaseh2b	87	52.308	ENSPPAG00000026374	RNASEH2B	89	51.471	Pan_paniscus
ENSXCOG00000018732	rnaseh2b	89	49.064	ENSPPRG00000012450	RNASEH2B	94	46.875	Panthera_pardus
ENSXCOG00000018732	rnaseh2b	87	50.192	ENSPTIG00000013918	RNASEH2B	97	50.183	Panthera_tigris_altaica
ENSXCOG00000018732	rnaseh2b	89	51.504	ENSPTRG00000005886	RNASEH2B	95	54.217	Pan_troglodytes
ENSXCOG00000018732	rnaseh2b	96	49.306	ENSPANG00000022424	-	92	49.306	Papio_anubis
ENSXCOG00000018732	rnaseh2b	100	64.610	ENSPKIG00000013386	rnaseh2b	100	64.610	Paramormyrops_kingsleyae
ENSXCOG00000018732	rnaseh2b	57	52.874	ENSPSIG00000002224	RNASEH2B	81	52.874	Pelodiscus_sinensis
ENSXCOG00000018732	rnaseh2b	66	78.974	ENSPMGG00000010299	rnaseh2b	95	78.974	Periophthalmus_magnuspinnatus
ENSXCOG00000018732	rnaseh2b	89	52.852	ENSPEMG00000019721	Rnaseh2b	87	52.788	Peromyscus_maniculatus_bairdii
ENSXCOG00000018732	rnaseh2b	94	51.724	ENSPCIG00000014535	-	97	51.724	Phascolarctos_cinereus
ENSXCOG00000018732	rnaseh2b	100	91.262	ENSPFOG00000016722	rnaseh2b	100	91.262	Poecilia_formosa
ENSXCOG00000018732	rnaseh2b	100	91.531	ENSPLAG00000011755	rnaseh2b	100	91.531	Poecilia_latipinna
ENSXCOG00000018732	rnaseh2b	100	91.857	ENSPMEG00000002721	rnaseh2b	100	91.857	Poecilia_mexicana
ENSXCOG00000018732	rnaseh2b	100	91.857	ENSPREG00000007737	rnaseh2b	100	91.857	Poecilia_reticulata
ENSXCOG00000018732	rnaseh2b	89	51.504	ENSPPYG00000005378	RNASEH2B	86	51.471	Pongo_abelii
ENSXCOG00000018732	rnaseh2b	89	52.273	ENSPCOG00000026623	RNASEH2B	87	52.593	Propithecus_coquereli
ENSXCOG00000018732	rnaseh2b	76	51.271	ENSPVAG00000000508	RNASEH2B	88	51.271	Pteropus_vampyrus
ENSXCOG00000018732	rnaseh2b	100	79.932	ENSPNYG00000013552	rnaseh2b	100	79.932	Pundamilia_nyererei
ENSXCOG00000018732	rnaseh2b	99	67.427	ENSPNAG00000024825	rnaseh2b	99	67.427	Pygocentrus_nattereri
ENSXCOG00000018732	rnaseh2b	89	52.852	ENSRNOG00000009192	Rnaseh2b	87	53.160	Rattus_norvegicus
ENSXCOG00000018732	rnaseh2b	87	46.124	ENSRBIG00000036017	-	86	46.212	Rhinopithecus_bieti
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSRBIG00000028928	-	86	51.119	Rhinopithecus_bieti
ENSXCOG00000018732	rnaseh2b	71	40.385	ENSRROG00000044915	-	80	41.121	Rhinopithecus_roxellana
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSRROG00000018808	-	87	50.554	Rhinopithecus_roxellana
ENSXCOG00000018732	rnaseh2b	89	52.471	ENSSBOG00000008081	RNASEH2B	96	52.416	Saimiri_boliviensis_boliviensis
ENSXCOG00000018732	rnaseh2b	100	53.548	ENSSHAG00000016190	RNASEH2B	100	54.221	Sarcophilus_harrisii
ENSXCOG00000018732	rnaseh2b	99	67.101	ENSSFOG00015010190	rnaseh2b	100	67.101	Scleropages_formosus
ENSXCOG00000018732	rnaseh2b	100	80.065	ENSSMAG00000001546	rnaseh2b	100	80.065	Scophthalmus_maximus
ENSXCOG00000018732	rnaseh2b	100	82.085	ENSSDUG00000007567	rnaseh2b	100	82.085	Seriola_dumerili
ENSXCOG00000018732	rnaseh2b	100	84.000	ENSSLDG00000012485	rnaseh2b	100	84.000	Seriola_lalandi_dorsalis
ENSXCOG00000018732	rnaseh2b	88	54.406	ENSSPUG00000006745	-	94	54.406	Sphenodon_punctatus
ENSXCOG00000018732	rnaseh2b	100	82.410	ENSSPAG00000020926	rnaseh2b	100	82.410	Stegastes_partitus
ENSXCOG00000018732	rnaseh2b	88	50.958	ENSSSCG00000024385	RNASEH2B	95	53.689	Sus_scrofa
ENSXCOG00000018732	rnaseh2b	90	60.674	ENSTGUG00000012104	RNASEH2B	99	61.255	Taeniopygia_guttata
ENSXCOG00000018732	rnaseh2b	100	79.153	ENSTRUG00000015098	rnaseh2b	100	79.153	Takifugu_rubripes
ENSXCOG00000018732	rnaseh2b	100	77.922	ENSTNIG00000013861	rnaseh2b	100	77.922	Tetraodon_nigroviridis
ENSXCOG00000018732	rnaseh2b	88	45.455	ENSTTRG00000010761	RNASEH2B	87	47.037	Tursiops_truncatus
ENSXCOG00000018732	rnaseh2b	89	51.711	ENSUAMG00000022849	RNASEH2B	96	52.416	Ursus_americanus
ENSXCOG00000018732	rnaseh2b	93	50.000	ENSUMAG00000018556	RNASEH2B	98	50.000	Ursus_maritimus
ENSXCOG00000018732	rnaseh2b	88	52.672	ENSVPAG00000005679	RNASEH2B	92	52.985	Vicugna_pacos
ENSXCOG00000018732	rnaseh2b	89	49.810	ENSVVUG00000024015	RNASEH2B	80	50.929	Vulpes_vulpes
ENSXCOG00000018732	rnaseh2b	99	52.597	ENSXETG00000020720	rnaseh2b	100	52.597	Xenopus_tropicalis
ENSXCOG00000018732	rnaseh2b	100	96.417	ENSXMAG00000022554	rnaseh2b	100	96.417	Xiphophorus_maculatus