EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000018775 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
2537 bases
Position
chrKQ557203.1:23567340-23569876
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000025141CBFNTPF08143.111.9e-0811
ENSXCOP00000025141RRM_1PF00076.222.7e-3712
ENSXCOP00000025141RRM_1PF00076.222.7e-3722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000025446-792-ENSXCOP00000025141263 (aa)--
Gene Model
Click here to download ENSXCOG00000018775's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018775's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000018775-6738.251ENSXCOG00000009001-9934.934
ENSXCOG00000018775-7337.000ENSXCOG00000019224HNRNPA1P487137.647
ENSXCOG00000018775-5732.877ENSXCOG00000009422slirp8332.877
ENSXCOG00000018775-9386.957ENSXCOG00000003397hnrnpaba10070.696
ENSXCOG00000018775-6868.098ENSXCOG00000017639hnrnpd10053.077
ENSXCOG00000018775-6840.541ENSXCOG00000008262cirbpa7848.980
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000018775-8774.123ENSG00000197451HNRNPAB8273.160Homo_sapiens
ENSXCOG00000018775-10093.233ENSAPOG00000016726-9193.233Acanthochromis_polyacanthus
ENSXCOG00000018775-9382.609ENSAPOG00000009207hnrnpaba7271.849Acanthochromis_polyacanthus
ENSXCOG00000018775-6583.529ENSAMEG00000006465HNRNPAB6383.030Ailuropoda_melanoleuca
ENSXCOG00000018775-8592.035ENSACIG00000012959-7592.035Amphilophus_citrinellus
ENSXCOG00000018775-8470.661ENSACIG00000017341hnrnpaba7271.429Amphilophus_citrinellus
ENSXCOG00000018775-10088.603ENSAOCG00000020596-8990.074Amphiprion_ocellaris
ENSXCOG00000018775-9382.609ENSAOCG00000012562hnrnpaba7271.849Amphiprion_ocellaris
ENSXCOG00000018775-8892.735ENSAPEG00000001689-7292.735Amphiprion_percula
ENSXCOG00000018775-9382.609ENSAPEG00000017599hnrnpaba10069.965Amphiprion_percula
ENSXCOG00000018775-8894.017ENSATEG00000022784-8195.000Anabas_testudineus
ENSXCOG00000018775-9382.609ENSATEG00000006705hnrnpaba7270.833Anabas_testudineus
ENSXCOG00000018775-8058.935ENSAPLG00000014040HNRNPAB6380.606Anas_platyrhynchos
ENSXCOG00000018775-8774.561ENSACAG00000016946HNRNPAB7967.433Anolis_carolinensis
ENSXCOG00000018775-8774.249ENSANAG00000026991HNRNPAB8272.961Aotus_nancymaae
ENSXCOG00000018775-8772.807ENSANAG00000026572-8272.807Aotus_nancymaae
ENSXCOG00000018775-10069.580ENSACLG00000007827hnrnpaba10068.531Astatotilapia_calliptera
ENSXCOG00000018775-8469.796ENSACLG00000007958hnrnpaba7270.124Astatotilapia_calliptera
ENSXCOG00000018775-10085.714ENSACLG00000024583-10084.211Astatotilapia_calliptera
ENSXCOG00000018775-10060.377ENSAMXG00000039814hnrnpabb10062.893Astyanax_mexicanus
ENSXCOG00000018775-8573.750ENSAMXG00000002560hnrnpaba7273.191Astyanax_mexicanus
ENSXCOG00000018775-8774.249ENSBTAG00000013627HNRNPAB8272.961Bos_taurus
ENSXCOG00000018775-8774.249ENSCJAG00000012235HNRNPAB8272.961Callithrix_jacchus
ENSXCOG00000018775-6577.193ENSCAFG00000000241HNRNPAB6379.394Canis_familiaris
ENSXCOG00000018775-7181.383ENSCAFG00020003646HNRNPAB5580.874Canis_lupus_dingo
ENSXCOG00000018775-8774.678ENSCHIG00000021687HNRNPAB8273.391Capra_hircus
ENSXCOG00000018775-8661.233ENSTSYG00000037019-8459.471Carlito_syrichta
ENSXCOG00000018775-8086.735ENSCAPG00000005367HNRNPAB10086.735Cavia_aperea
ENSXCOG00000018775-8774.123ENSCPOG00000025972HNRNPAB8174.123Cavia_porcellus
ENSXCOG00000018775-8774.249ENSCCAG00000036244HNRNPAB8272.961Cebus_capucinus
ENSXCOG00000018775-8774.249ENSCATG00000032328HNRNPAB8272.961Cercocebus_atys
ENSXCOG00000018775-8175.000ENSCLAG00000011022HNRNPAB7875.000Chinchilla_lanigera
ENSXCOG00000018775-8773.391ENSCSAG00000002626-8772.103Chlorocebus_sabaeus
ENSXCOG00000018775-7141.553ENSCSAG00000008658-5840.187Chlorocebus_sabaeus
ENSXCOG00000018775-10068.382ENSCPBG00000008819HNRNPAB10068.382Chrysemys_picta_bellii
ENSXCOG00000018775-8045.972ENSCING00000016737-6745.972Ciona_intestinalis
ENSXCOG00000018775-7548.744ENSCSAVG00000000188-5253.892Ciona_savignyi
ENSXCOG00000018775-9739.016ENSCSAVG00000009774-6450.340Ciona_savignyi
ENSXCOG00000018775-8872.131ENSCANG00000033320HNRNPAB10070.492Colobus_angolensis_palliatus
ENSXCOG00000018775-8875.217ENSCGRG00001005044Hnrnpab8074.348Cricetulus_griseus_chok1gshd
ENSXCOG00000018775-9476.190ENSCGRG00000018216Hnrnpab8576.190Cricetulus_griseus_crigri
ENSXCOG00000018775-10070.251ENSCSEG00000011636hnrnpaba10068.459Cynoglossus_semilaevis
ENSXCOG00000018775-8582.063ENSCSEG00000010345-7082.110Cynoglossus_semilaevis
ENSXCOG00000018775-8475.105ENSCVAG00000019772hnrnpaba7174.249Cyprinodon_variegatus
ENSXCOG00000018775-10059.118ENSDARG00000007960hnrnpaba10073.958Danio_rerio
ENSXCOG00000018775-10060.377ENSDARG00000099865hnrnpabb6874.886Danio_rerio
ENSXCOG00000018775-6863.128ENSDNOG00000036054-5763.128Dasypus_novemcinctus
ENSXCOG00000018775-5570.139ENSDNOG00000032858-6669.504Dasypus_novemcinctus
ENSXCOG00000018775-7180.851ENSDNOG00000013820-5580.328Dasypus_novemcinctus
ENSXCOG00000018775-8773.684ENSDORG00000011015Hnrnpab8173.684Dipodomys_ordii
ENSXCOG00000018775-7163.830ENSETEG00000004998-5562.842Echinops_telfairi
ENSXCOG00000018775-8456.388ENSETEG00000001755-8458.150Echinops_telfairi
ENSXCOG00000018775-7167.204ENSEBUG00000016446HNRNPAB5067.196Eptatretus_burgeri
ENSXCOG00000018775-7765.842ENSEBUG00000007449HNRNPAB5766.497Eptatretus_burgeri
ENSXCOG00000018775-8773.504ENSEASG00005012572-8273.077Equus_asinus_asinus
ENSXCOG00000018775-7057.065ENSEASG00005004245-5959.322Equus_asinus_asinus
ENSXCOG00000018775-7854.106ENSECAG00000037355-6558.696Equus_caballus
ENSXCOG00000018775-7180.851ENSECAG00000018242-5880.328Equus_caballus
ENSXCOG00000018775-7370.861ENSEEUG00000013226HNRNPAB6070.068Erinaceus_europaeus
ENSXCOG00000018775-10057.849ENSELUG00000015443hnrnpaba10058.721Esox_lucius
ENSXCOG00000018775-9975.000ENSELUG00000020765hnrnpabb9975.352Esox_lucius
ENSXCOG00000018775-8774.249ENSFCAG00000027603HNRNPAB8272.961Felis_catus
ENSXCOG00000018775-7080.473ENSFALG00000007654HNRNPAB6380.488Ficedula_albicollis
ENSXCOG00000018775-8075.238ENSFDAG00000016490HNRNPAB8675.238Fukomys_damarensis
ENSXCOG00000018775-8396.789ENSFHEG00000005659-6996.789Fundulus_heteroclitus
ENSXCOG00000018775-9382.609ENSFHEG00000013108hnrnpaba10072.302Fundulus_heteroclitus
ENSXCOG00000018775-9286.957ENSGMOG00000009355-7073.016Gadus_morhua
ENSXCOG00000018775-8774.783ENSGALG00000014381HNRNPAB5572.881Gallus_gallus
ENSXCOG00000018775-10083.387ENSGAFG00000011265-79100.000Gambusia_affinis
ENSXCOG00000018775-9382.609ENSGAFG00000008331hnrnpaba7173.246Gambusia_affinis
ENSXCOG00000018775-9382.609ENSGACG00000018116hnrnpaba7268.750Gasterosteus_aculeatus
ENSXCOG00000018775-10068.731ENSGACG00000020830-7286.638Gasterosteus_aculeatus
ENSXCOG00000018775-10068.015ENSGAGG00000007175HNRNPAB10068.015Gopherus_agassizii
ENSXCOG00000018775-8773.820ENSGGOG00000011692HNRNPAB8272.532Gorilla_gorilla
ENSXCOG00000018775-8666.960ENSGGOG00000028444-9566.667Gorilla_gorilla
ENSXCOG00000018775-10072.152ENSHBUG00000014556-7090.498Haplochromis_burtoni
ENSXCOG00000018775-8469.796ENSHBUG00000002484hnrnpaba7270.124Haplochromis_burtoni
ENSXCOG00000018775-8774.138ENSHGLG00000014490HNRNPAB8273.276Heterocephalus_glaber_female
ENSXCOG00000018775-8075.829ENSHGLG00100007384HNRNPAB8474.194Heterocephalus_glaber_male
ENSXCOG00000018775-8283.333ENSHCOG00000009363-6883.482Hippocampus_comes
ENSXCOG00000018775-9774.906ENSHCOG00000015341hnrnpaba9873.507Hippocampus_comes
ENSXCOG00000018775-9960.245ENSIPUG00000020220hnrnpab9962.229Ictalurus_punctatus
ENSXCOG00000018775-10053.666ENSIPUG00000018218HNRNPAB7170.082Ictalurus_punctatus
ENSXCOG00000018775-8774.138ENSSTOG00000024394HNRNPAB8272.845Ictidomys_tridecemlineatus
ENSXCOG00000018775-8075.000ENSJJAG00000022240Hnrnpab9374.057Jaculus_jaculus
ENSXCOG00000018775-8090.610ENSKMAG00000003831-76100.000Kryptolebias_marmoratus
ENSXCOG00000018775-9382.609ENSKMAG00000005188hnrnpaba10073.381Kryptolebias_marmoratus
ENSXCOG00000018775-7380.105ENSLBEG00000006595hnrnpaba5579.255Labrus_bergylta
ENSXCOG00000018775-9186.957ENSLBEG00000004479-7779.528Labrus_bergylta
ENSXCOG00000018775-8572.247ENSLACG00000015227HNRNPAB7072.072Latimeria_chalumnae
ENSXCOG00000018775-10058.209ENSLOCG00000009773hnrnpabb6671.186Lepisosteus_oculatus
ENSXCOG00000018775-7081.622ENSLAFG00000001189HNRNPAB5580.663Loxodonta_africana
ENSXCOG00000018775-8774.249ENSMFAG00000035188HNRNPAB8272.961Macaca_fascicularis
ENSXCOG00000018775-8774.026ENSMMUG00000003996HNRNPAB8273.593Macaca_mulatta
ENSXCOG00000018775-8774.249ENSMNEG00000044677HNRNPAB8272.961Macaca_nemestrina
ENSXCOG00000018775-8872.131ENSMLEG00000039381-10070.492Mandrillus_leucophaeus
ENSXCOG00000018775-9382.609ENSMAMG00000008021hnrnpaba7270.886Mastacembelus_armatus
ENSXCOG00000018775-10092.857ENSMAMG00000020142-10092.857Mastacembelus_armatus
ENSXCOG00000018775-10085.714ENSMZEG00005011821-10084.211Maylandia_zebra
ENSXCOG00000018775-8469.796ENSMZEG00005012480hnrnpaba7270.124Maylandia_zebra
ENSXCOG00000018775-8075.943ENSMGAG00000007727HNRNPAB10075.472Meleagris_gallopavo
ENSXCOG00000018775-8773.820ENSMICG00000027030HNRNPAB8273.391Microcebus_murinus
ENSXCOG00000018775-8874.561ENSMOCG00000014470Hnrnpab8074.561Microtus_ochrogaster
ENSXCOG00000018775-10087.970ENSMMOG00000016852-10087.970Mola_mola
ENSXCOG00000018775-6484.694ENSMMOG00000004165HNRNPAB6584.694Mola_mola
ENSXCOG00000018775-10092.481ENSMALG00000010467-10092.481Monopterus_albus
ENSXCOG00000018775-8472.314ENSMALG00000015091hnrnpaba7271.849Monopterus_albus
ENSXCOG00000018775-8874.561MGP_CAROLIEiJ_G0016311Hnrnpab8074.561Mus_caroli
ENSXCOG00000018775-8874.561ENSMUSG00000020358Hnrnpab8074.561Mus_musculus
ENSXCOG00000018775-8874.561MGP_PahariEiJ_G0017446Hnrnpab8074.561Mus_pahari
ENSXCOG00000018775-8874.561MGP_SPRETEiJ_G0017155Hnrnpab8074.561Mus_spretus
ENSXCOG00000018775-7379.581ENSMPUG00000000743HNRNPAB5579.032Mustela_putorius_furo
ENSXCOG00000018775-7178.836ENSMLUG00000003380HNRNPAB6967.241Myotis_lucifugus
ENSXCOG00000018775-8774.348ENSNGAG00000021642Hnrnpab8073.478Nannospalax_galili
ENSXCOG00000018775-10069.930ENSNBRG00000011408hnrnpaba10068.881Neolamprologus_brichardi
ENSXCOG00000018775-10073.333ENSNBRG00000014795-7390.909Neolamprologus_brichardi
ENSXCOG00000018775-7370.543ENSNLEG00000034681-7970.968Nomascus_leucogenys
ENSXCOG00000018775-8872.131ENSNLEG00000015775-10070.492Nomascus_leucogenys
ENSXCOG00000018775-6581.765ENSMEUG00000007909HNRNPAB6477.473Notamacropus_eugenii
ENSXCOG00000018775-6583.529ENSOPRG00000002546HNRNPAB6383.030Ochotona_princeps
ENSXCOG00000018775-8773.160ENSODEG00000006830HNRNPAB8272.294Octodon_degus
ENSXCOG00000018775-10072.063ENSONIG00000013237-7490.598Oreochromis_niloticus
ENSXCOG00000018775-8470.492ENSONIG00000012982hnrnpaba7270.417Oreochromis_niloticus
ENSXCOG00000018775-8058.955ENSOANG00000004998HNRNPAB6280.000Ornithorhynchus_anatinus
ENSXCOG00000018775-6781.564ENSOCUG00000026424HNRNPAB6482.081Oryctolagus_cuniculus
ENSXCOG00000018775-8473.222ENSORLG00000005327hnrnpaba7173.191Oryzias_latipes
ENSXCOG00000018775-8473.222ENSORLG00020012133hnrnpaba7173.191Oryzias_latipes_hni
ENSXCOG00000018775-8473.222ENSORLG00015022877hnrnpaba7173.191Oryzias_latipes_hsok
ENSXCOG00000018775-10058.967ENSOMEG00000005936hnrnpaba7274.262Oryzias_melastigma
ENSXCOG00000018775-7180.851ENSOGAG00000030251HNRNPAB5580.328Otolemur_garnettii
ENSXCOG00000018775-7181.383ENSOARG00000006311HNRNPAB5580.874Ovis_aries
ENSXCOG00000018775-7272.105ENSPPAG00000041555-7174.576Pan_paniscus
ENSXCOG00000018775-8871.585ENSPPAG00000037536-10069.945Pan_paniscus
ENSXCOG00000018775-8075.714ENSPPRG00000020542HNRNPAB7975.472Panthera_pardus
ENSXCOG00000018775-8871.823ENSPTIG00000021727HNRNPAB10071.271Panthera_tigris_altaica
ENSXCOG00000018775-8773.391ENSPTRG00000017601HNRNPAB8272.961Pan_troglodytes
ENSXCOG00000018775-7074.054ENSPTRG00000048246-7074.576Pan_troglodytes
ENSXCOG00000018775-8774.249ENSPANG00000014427HNRNPAB8272.961Papio_anubis
ENSXCOG00000018775-9482.609ENSPKIG00000008659hnrnpaba7170.782Paramormyrops_kingsleyae
ENSXCOG00000018775-10060.909ENSPKIG00000018904-10061.818Paramormyrops_kingsleyae
ENSXCOG00000018775-8876.555ENSPSIG00000010617HNRNPAB10076.555Pelodiscus_sinensis
ENSXCOG00000018775-8074.194ENSPMGG00000004062HNRNPAB8573.373Periophthalmus_magnuspinnatus
ENSXCOG00000018775-7875.000ENSPMGG00000001821-7275.000Periophthalmus_magnuspinnatus
ENSXCOG00000018775-9473.009ENSPEMG00000023987Hnrnpab8475.000Peromyscus_maniculatus_bairdii
ENSXCOG00000018775-9382.609ENSPFOG00000008278hnrnpaba7173.684Poecilia_formosa
ENSXCOG00000018775-10084.244ENSPFOG00000012650-80100.000Poecilia_formosa
ENSXCOG00000018775-10084.244ENSPLAG00000019814-80100.000Poecilia_latipinna
ENSXCOG00000018775-9382.609ENSPLAG00000009450hnrnpaba7173.684Poecilia_latipinna
ENSXCOG00000018775-9382.609ENSPMEG00000019974hnrnpaba7173.684Poecilia_mexicana
ENSXCOG00000018775-100100.000ENSPMEG00000023285-100100.000Poecilia_mexicana
ENSXCOG00000018775-100100.000ENSPREG00000013528-100100.000Poecilia_reticulata
ENSXCOG00000018775-9382.609ENSPREG00000004086hnrnpaba7173.246Poecilia_reticulata
ENSXCOG00000018775-7382.249ENSPPYG00000016107-6381.707Pongo_abelii
ENSXCOG00000018775-7183.140ENSPCAG00000006760HNRNPAB6383.030Procavia_capensis
ENSXCOG00000018775-8773.820ENSPCOG00000015793-8372.532Propithecus_coquereli
ENSXCOG00000018775-6754.237ENSPCOG00000019033-7459.398Propithecus_coquereli
ENSXCOG00000018775-6581.287ENSPVAG00000016742HNRNPAB5281.287Pteropus_vampyrus
ENSXCOG00000018775-8469.796ENSPNYG00000000303hnrnpaba7270.124Pundamilia_nyererei
ENSXCOG00000018775-10072.152ENSPNYG00000013003-7090.498Pundamilia_nyererei
ENSXCOG00000018775-10060.726ENSPNAG00000000458hnrnpaba10061.873Pygocentrus_nattereri
ENSXCOG00000018775-10076.030ENSPNAG00000028963hnrnpabb10074.532Pygocentrus_nattereri
ENSXCOG00000018775-8874.561ENSRNOG00000046272Hnrnpab8074.561Rattus_norvegicus
ENSXCOG00000018775-8874.561ENSRNOG00000003645LOC1036899318074.561Rattus_norvegicus
ENSXCOG00000018775-8774.249ENSRBIG00000029449HNRNPAB8272.961Rhinopithecus_bieti
ENSXCOG00000018775-8774.249ENSRROG00000035729HNRNPAB8272.961Rhinopithecus_roxellana
ENSXCOG00000018775-8872.527ENSSBOG00000022526HNRNPAB10070.879Saimiri_boliviensis_boliviensis
ENSXCOG00000018775-6581.765ENSSHAG00000015802-6181.212Sarcophilus_harrisii
ENSXCOG00000018775-6461.765ENSSHAG00000000936-6561.538Sarcophilus_harrisii
ENSXCOG00000018775-10071.930ENSSFOG00015015634hnrnpaba10070.877Scleropages_formosus
ENSXCOG00000018775-10056.734ENSSFOG00015022519hnrnpabb7367.194Scleropages_formosus
ENSXCOG00000018775-8079.048ENSSMAG00000003760hnrnpaba8976.667Scophthalmus_maximus
ENSXCOG00000018775-9382.609ENSSDUG00000004787hnrnpaba7271.429Seriola_dumerili
ENSXCOG00000018775-10073.186ENSSDUG00000009050-8095.000Seriola_dumerili
ENSXCOG00000018775-10073.186ENSSLDG00000001911-8095.000Seriola_lalandi_dorsalis
ENSXCOG00000018775-9382.609ENSSLDG00000005199hnrnpaba7271.429Seriola_lalandi_dorsalis
ENSXCOG00000018775-8777.632ENSSPUG00000016806HNRNPAB9369.732Sphenodon_punctatus
ENSXCOG00000018775-10090.637ENSSPAG00000005377-10091.386Stegastes_partitus
ENSXCOG00000018775-9382.609ENSSPAG00000013787hnrnpaba7271.849Stegastes_partitus
ENSXCOG00000018775-8656.828ENSSSCG00000001932-8056.195Sus_scrofa
ENSXCOG00000018775-8773.932ENSSSCG00000014031-7973.504Sus_scrofa
ENSXCOG00000018775-8061.628ENSTGUG00000001168HNRNPAB6480.606Taeniopygia_guttata
ENSXCOG00000018775-10060.938ENSTRUG00000025954hnrnpaba10060.125Takifugu_rubripes
ENSXCOG00000018775-10077.068ENSTRUG00000008411-9376.316Takifugu_rubripes
ENSXCOG00000018775-8662.500ENSTNIG00000010512hnrnpaba6478.182Tetraodon_nigroviridis
ENSXCOG00000018775-10066.346ENSTNIG00000007596-10066.026Tetraodon_nigroviridis
ENSXCOG00000018775-7070.492ENSTTRG00000010604HNRNPAB5369.832Tursiops_truncatus
ENSXCOG00000018775-6873.481ENSUAMG00000003337HNRNPAB6279.394Ursus_americanus
ENSXCOG00000018775-8872.131ENSUMAG00000023918HNRNPAB10070.492Ursus_maritimus
ENSXCOG00000018775-7178.378ENSVVUG00000002657-9778.378Vulpes_vulpes
ENSXCOG00000018775-8774.678ENSVVUG00000001047-8473.391Vulpes_vulpes
ENSXCOG00000018775-8469.620ENSXETG00000003836hnrnpab7569.231Xenopus_tropicalis
ENSXCOG00000018775-9382.609ENSXMAG00000008957hnrnpaba7173.684Xiphophorus_maculatus
ENSXCOG00000018775-100100.000ENSXMAG00000015407-100100.000Xiphophorus_maculatus

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