EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000018776 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 1634 bases
Position: chrKQ557205.1:64548-66181
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025140	LSM	PF01423.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025445	-	480	-	ENSXCOP00000025140	159 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018776	oscp1a	75	61.345	ENSG00000181817	LSM10	97	61.345	Homo_sapiens
ENSXCOG00000018776	oscp1a	79	60.800	ENSAMEG00000019854	LSM10	96	60.800	Ailuropoda_melanoleuca
ENSXCOG00000018776	oscp1a	86	64.234	ENSACIG00000015420	oscp1a	86	65.385	Amphilophus_citrinellus
ENSXCOG00000018776	oscp1a	72	76.522	ENSAOCG00000014654	-	96	75.862	Amphiprion_ocellaris
ENSXCOG00000018776	oscp1a	76	65.625	ENSAOCG00000015607	LSM10	99	65.625	Amphiprion_ocellaris
ENSXCOG00000018776	oscp1a	72	76.522	ENSAOCG00000015618	LSM10	96	75.862	Amphiprion_ocellaris
ENSXCOG00000018776	oscp1a	72	76.522	ENSAPEG00000021845	-	96	75.862	Amphiprion_percula
ENSXCOG00000018776	oscp1a	76	65.625	ENSAPEG00000021851	LSM10	99	65.625	Amphiprion_percula
ENSXCOG00000018776	oscp1a	70	74.107	ENSATEG00000006310	oscp1a	83	74.107	Anabas_testudineus
ENSXCOG00000018776	oscp1a	73	59.483	ENSACAG00000001231	LSM10	94	59.483	Anolis_carolinensis
ENSXCOG00000018776	oscp1a	75	60.833	ENSANAG00000018759	-	98	60.833	Aotus_nancymaae
ENSXCOG00000018776	oscp1a	75	59.167	ENSANAG00000031489	-	98	59.167	Aotus_nancymaae
ENSXCOG00000018776	oscp1a	74	68.644	ENSACLG00000004728	oscp1a	96	68.644	Astatotilapia_calliptera
ENSXCOG00000018776	oscp1a	74	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSXCOG00000018776	oscp1a	76	60.331	ENSBTAG00000024096	LSM10	99	60.331	Bos_taurus
ENSXCOG00000018776	oscp1a	75	61.667	ENSCJAG00000044880	LSM10	98	61.667	Callithrix_jacchus
ENSXCOG00000018776	oscp1a	81	60.156	ENSCAFG00000003382	LSM10	98	60.156	Canis_familiaris
ENSXCOG00000018776	oscp1a	81	60.156	ENSCAFG00020008920	LSM10	98	60.156	Canis_lupus_dingo
ENSXCOG00000018776	oscp1a	76	60.331	ENSCHIG00000009398	LSM10	99	60.331	Capra_hircus
ENSXCOG00000018776	oscp1a	75	61.983	ENSCAPG00000012567	LSM10	98	61.983	Cavia_aperea
ENSXCOG00000018776	oscp1a	75	61.983	ENSCPOG00000039302	LSM10	98	61.983	Cavia_porcellus
ENSXCOG00000018776	oscp1a	75	58.333	ENSCCAG00000008378	-	98	58.333	Cebus_capucinus
ENSXCOG00000018776	oscp1a	75	60.833	ENSCCAG00000018913	-	98	60.833	Cebus_capucinus
ENSXCOG00000018776	oscp1a	79	60.000	ENSCATG00000006589	LSM10	96	60.000	Cercocebus_atys
ENSXCOG00000018776	oscp1a	74	62.712	ENSCLAG00000008633	LSM10	96	62.712	Chinchilla_lanigera
ENSXCOG00000018776	oscp1a	79	60.000	ENSCSAG00000000134	LSM10	96	60.000	Chlorocebus_sabaeus
ENSXCOG00000018776	oscp1a	72	61.538	ENSCHOG00000008615	LSM10	94	61.538	Choloepus_hoffmanni
ENSXCOG00000018776	oscp1a	64	33.663	ENSCSAVG00000001896	-	86	33.663	Ciona_savignyi
ENSXCOG00000018776	oscp1a	79	60.000	ENSCANG00000019928	LSM10	96	60.000	Colobus_angolensis_palliatus
ENSXCOG00000018776	oscp1a	72	57.759	ENSCGRG00001022673	-	93	57.759	Cricetulus_griseus_chok1gshd
ENSXCOG00000018776	oscp1a	72	64.348	ENSCGRG00001004317	-	94	64.348	Cricetulus_griseus_chok1gshd
ENSXCOG00000018776	oscp1a	72	57.759	ENSCGRG00000015514	-	93	57.759	Cricetulus_griseus_crigri
ENSXCOG00000018776	oscp1a	72	64.348	ENSCGRG00000014935	-	94	64.348	Cricetulus_griseus_crigri
ENSXCOG00000018776	oscp1a	74	70.339	ENSCSEG00000010374	oscp1a	79	70.339	Cynoglossus_semilaevis
ENSXCOG00000018776	oscp1a	81	68.217	ENSCVAG00000001536	oscp1a	98	68.217	Cyprinodon_variegatus
ENSXCOG00000018776	oscp1a	75	68.067	ENSDARG00000101222	oscp1a	98	68.067	Danio_rerio
ENSXCOG00000018776	oscp1a	73	63.793	ENSDNOG00000036662	LSM10	94	63.793	Dasypus_novemcinctus
ENSXCOG00000018776	oscp1a	79	60.800	ENSDORG00000007579	Lsm10	96	60.800	Dipodomys_ordii
ENSXCOG00000018776	oscp1a	72	63.478	ENSETEG00000005703	LSM10	93	63.478	Echinops_telfairi
ENSXCOG00000018776	oscp1a	70	53.571	ENSEBUG00000001312	oscp1a	92	53.571	Eptatretus_burgeri
ENSXCOG00000018776	oscp1a	79	60.800	ENSEASG00005012194	LSM10	96	60.800	Equus_asinus_asinus
ENSXCOG00000018776	oscp1a	79	60.800	ENSECAG00000005071	LSM10	96	60.800	Equus_caballus
ENSXCOG00000018776	oscp1a	79	62.400	ENSEEUG00000012032	LSM10	96	62.400	Erinaceus_europaeus
ENSXCOG00000018776	oscp1a	75	73.109	ENSELUG00000007452	oscp1a	98	73.109	Esox_lucius
ENSXCOG00000018776	oscp1a	73	66.379	ENSFALG00000000851	LSM10	94	66.379	Ficedula_albicollis
ENSXCOG00000018776	oscp1a	74	63.559	ENSFDAG00000021056	LSM10	96	63.559	Fukomys_damarensis
ENSXCOG00000018776	oscp1a	69	78.182	ENSFHEG00000001058	oscp1a	95	78.182	Fundulus_heteroclitus
ENSXCOG00000018776	oscp1a	73	65.517	ENSGMOG00000019832	oscp1a	97	65.517	Gadus_morhua
ENSXCOG00000018776	oscp1a	73	66.379	ENSGALG00000002127	LSM10	94	66.379	Gallus_gallus
ENSXCOG00000018776	oscp1a	64	95.098	ENSGAFG00000016445	oscp1a	84	94.175	Gambusia_affinis
ENSXCOG00000018776	oscp1a	75	71.667	ENSGACG00000002329	oscp1a	98	71.667	Gasterosteus_aculeatus
ENSXCOG00000018776	oscp1a	73	63.793	ENSGAGG00000024848	LSM10	94	63.793	Gopherus_agassizii
ENSXCOG00000018776	oscp1a	75	61.345	ENSGGOG00000003556	LSM10	97	61.345	Gorilla_gorilla
ENSXCOG00000018776	oscp1a	74	69.492	ENSHBUG00000001722	oscp1a	96	69.492	Haplochromis_burtoni
ENSXCOG00000018776	oscp1a	74	61.017	ENSHGLG00000011625	LSM10	96	61.017	Heterocephalus_glaber_female
ENSXCOG00000018776	oscp1a	74	61.017	ENSHGLG00100001769	LSM10	96	61.017	Heterocephalus_glaber_male
ENSXCOG00000018776	oscp1a	67	71.028	ENSIPUG00000005808	oscp1a	93	71.028	Ictalurus_punctatus
ENSXCOG00000018776	oscp1a	81	59.375	ENSSTOG00000000606	LSM10	98	59.375	Ictidomys_tridecemlineatus
ENSXCOG00000018776	oscp1a	74	77.119	ENSKMAG00000012143	oscp1a	98	77.119	Kryptolebias_marmoratus
ENSXCOG00000018776	oscp1a	70	72.072	ENSLBEG00000017764	oscp1a	91	72.072	Labrus_bergylta
ENSXCOG00000018776	oscp1a	79	56.000	ENSLACG00000015904	LSM10	91	56.000	Latimeria_chalumnae
ENSXCOG00000018776	oscp1a	74	67.797	ENSLOCG00000018277	oscp1a	97	67.797	Lepisosteus_oculatus
ENSXCOG00000018776	oscp1a	79	60.000	ENSLAFG00000009600	LSM10	94	62.931	Loxodonta_africana
ENSXCOG00000018776	oscp1a	79	60.000	ENSMFAG00000009115	LSM10	96	60.000	Macaca_fascicularis
ENSXCOG00000018776	oscp1a	79	60.000	ENSMMUG00000017338	LSM10	96	60.000	Macaca_mulatta
ENSXCOG00000018776	oscp1a	79	60.000	ENSMNEG00000020023	LSM10	96	60.000	Macaca_nemestrina
ENSXCOG00000018776	oscp1a	79	60.000	ENSMLEG00000025150	LSM10	96	60.000	Mandrillus_leucophaeus
ENSXCOG00000018776	oscp1a	74	72.881	ENSMAMG00000004427	oscp1a	97	72.881	Mastacembelus_armatus
ENSXCOG00000018776	oscp1a	74	68.644	ENSMZEG00005026307	oscp1a	96	68.644	Maylandia_zebra
ENSXCOG00000018776	oscp1a	73	65.517	ENSMGAG00000015707	LSM10	94	65.517	Meleagris_gallopavo
ENSXCOG00000018776	oscp1a	72	65.217	ENSMAUG00000016624	Lsm10	94	65.217	Mesocricetus_auratus
ENSXCOG00000018776	oscp1a	72	65.217	ENSMOCG00000021943	Lsm10	94	65.217	Microtus_ochrogaster
ENSXCOG00000018776	oscp1a	81	70.000	ENSMMOG00000013597	oscp1a	99	68.939	Mola_mola
ENSXCOG00000018776	oscp1a	73	65.517	ENSMODG00000023328	LSM10	94	65.517	Monodelphis_domestica
ENSXCOG00000018776	oscp1a	74	64.103	MGP_CAROLIEiJ_G0026467	Lsm10	95	65.909	Mus_caroli
ENSXCOG00000018776	oscp1a	74	64.103	ENSMUSG00000050188	Lsm10	95	65.909	Mus_musculus
ENSXCOG00000018776	oscp1a	74	64.103	MGP_PahariEiJ_G0028798	Lsm10	95	65.909	Mus_pahari
ENSXCOG00000018776	oscp1a	74	64.103	MGP_SPRETEiJ_G0027446	Lsm10	95	65.909	Mus_spretus
ENSXCOG00000018776	oscp1a	81	60.156	ENSMPUG00000018593	LSM10	98	60.156	Mustela_putorius_furo
ENSXCOG00000018776	oscp1a	75	64.463	ENSMLUG00000023895	LSM10	98	64.463	Myotis_lucifugus
ENSXCOG00000018776	oscp1a	72	62.609	ENSNGAG00000015011	Lsm10	93	62.609	Nannospalax_galili
ENSXCOG00000018776	oscp1a	76	66.942	ENSNBRG00000014306	oscp1a	98	66.942	Neolamprologus_brichardi
ENSXCOG00000018776	oscp1a	75	61.345	ENSNLEG00000033754	LSM10	97	61.345	Nomascus_leucogenys
ENSXCOG00000018776	oscp1a	73	65.517	ENSMEUG00000006313	LSM10	94	65.517	Notamacropus_eugenii
ENSXCOG00000018776	oscp1a	72	65.217	ENSOPRG00000001699	LSM10	95	64.103	Ochotona_princeps
ENSXCOG00000018776	oscp1a	74	62.712	ENSODEG00000019161	LSM10	96	62.712	Octodon_degus
ENSXCOG00000018776	oscp1a	75	68.067	ENSONIG00000020904	oscp1a	98	68.067	Oreochromis_niloticus
ENSXCOG00000018776	oscp1a	76	61.983	ENSOANG00000002066	LSM10	98	61.983	Ornithorhynchus_anatinus
ENSXCOG00000018776	oscp1a	74	62.712	ENSOCUG00000005333	LSM10	96	62.712	Oryctolagus_cuniculus
ENSXCOG00000018776	oscp1a	72	72.174	ENSORLG00000009504	oscp1a	93	74.107	Oryzias_latipes
ENSXCOG00000018776	oscp1a	72	72.174	ENSORLG00020016201	oscp1a	93	74.107	Oryzias_latipes_hni
ENSXCOG00000018776	oscp1a	72	71.304	ENSORLG00015007794	oscp1a	95	71.304	Oryzias_latipes_hsok
ENSXCOG00000018776	oscp1a	81	59.375	ENSOGAG00000002653	LSM10	98	59.375	Otolemur_garnettii
ENSXCOG00000018776	oscp1a	76	60.331	ENSOARG00000009596	LSM10	99	60.331	Ovis_aries
ENSXCOG00000018776	oscp1a	75	61.345	ENSPPAG00000023465	LSM10	97	61.345	Pan_paniscus
ENSXCOG00000018776	oscp1a	79	60.800	ENSPPRG00000014619	LSM10	96	60.800	Panthera_pardus
ENSXCOG00000018776	oscp1a	79	60.800	ENSPTIG00000004613	LSM10	96	60.800	Panthera_tigris_altaica
ENSXCOG00000018776	oscp1a	75	61.345	ENSPTRG00000000539	LSM10	97	61.345	Pan_troglodytes
ENSXCOG00000018776	oscp1a	79	60.000	ENSPANG00000023172	LSM10	96	60.000	Papio_anubis
ENSXCOG00000018776	oscp1a	76	69.421	ENSPKIG00000003728	oscp1a	98	69.421	Paramormyrops_kingsleyae
ENSXCOG00000018776	oscp1a	81	58.915	ENSPSIG00000000590	LSM10	99	58.915	Pelodiscus_sinensis
ENSXCOG00000018776	oscp1a	64	63.725	ENSPCIG00000014865	LSM10	75	63.725	Phascolarctos_cinereus
ENSXCOG00000018776	oscp1a	73	93.103	ENSPFOG00000020490	oscp1a	98	93.103	Poecilia_formosa
ENSXCOG00000018776	oscp1a	79	93.651	ENSPLAG00000016537	oscp1a	96	93.651	Poecilia_latipinna
ENSXCOG00000018776	oscp1a	68	92.593	ENSPMEG00000000174	oscp1a	94	92.593	Poecilia_mexicana
ENSXCOG00000018776	oscp1a	79	95.238	ENSPREG00000009899	oscp1a	96	95.238	Poecilia_reticulata
ENSXCOG00000018776	oscp1a	75	61.345	ENSPPYG00000001539	LSM10	97	61.345	Pongo_abelii
ENSXCOG00000018776	oscp1a	71	64.602	ENSPCAG00000002520	LSM10	93	64.602	Procavia_capensis
ENSXCOG00000018776	oscp1a	74	63.559	ENSPVAG00000008644	LSM10	96	63.559	Pteropus_vampyrus
ENSXCOG00000018776	oscp1a	74	69.492	ENSPNYG00000003138	oscp1a	96	69.492	Pundamilia_nyererei
ENSXCOG00000018776	oscp1a	72	70.435	ENSPNAG00000028829	oscp1a	95	70.435	Pygocentrus_nattereri
ENSXCOG00000018776	oscp1a	74	63.248	ENSRNOG00000025716	Lsm10	96	63.248	Rattus_norvegicus
ENSXCOG00000018776	oscp1a	79	60.000	ENSRBIG00000001561	LSM10	96	60.000	Rhinopithecus_bieti
ENSXCOG00000018776	oscp1a	79	60.000	ENSRROG00000011414	LSM10	96	60.000	Rhinopithecus_roxellana
ENSXCOG00000018776	oscp1a	75	60.833	ENSSBOG00000036413	-	98	60.833	Saimiri_boliviensis_boliviensis
ENSXCOG00000018776	oscp1a	73	65.517	ENSSHAG00000018056	LSM10	94	65.517	Sarcophilus_harrisii
ENSXCOG00000018776	oscp1a	75	72.269	ENSSFOG00015019954	lsm10	98	72.269	Scleropages_formosus
ENSXCOG00000018776	oscp1a	72	76.522	ENSSMAG00000001297	oscp1a	98	76.522	Scophthalmus_maximus
ENSXCOG00000018776	oscp1a	74	67.521	ENSSDUG00000007090	oscp1a	95	67.521	Seriola_dumerili
ENSXCOG00000018776	oscp1a	74	66.667	ENSSLDG00000000800	oscp1a	97	66.667	Seriola_lalandi_dorsalis
ENSXCOG00000018776	oscp1a	66	63.810	ENSSARG00000004211	LSM10	94	64.103	Sorex_araneus
ENSXCOG00000018776	oscp1a	74	74.576	ENSSPAG00000009229	oscp1a	98	74.576	Stegastes_partitus
ENSXCOG00000018776	oscp1a	75	60.833	ENSSSCG00000038916	LSM10	98	60.833	Sus_scrofa
ENSXCOG00000018776	oscp1a	73	67.241	ENSTGUG00000001602	-	95	67.241	Taeniopygia_guttata
ENSXCOG00000018776	oscp1a	73	66.379	ENSTGUG00000001600	-	95	66.379	Taeniopygia_guttata
ENSXCOG00000018776	oscp1a	75	70.588	ENSTRUG00000010531	oscp1a	97	70.000	Takifugu_rubripes
ENSXCOG00000018776	oscp1a	72	64.348	ENSTBEG00000016674	LSM10	93	64.348	Tupaia_belangeri
ENSXCOG00000018776	oscp1a	81	60.156	ENSUAMG00000020265	LSM10	98	60.156	Ursus_americanus
ENSXCOG00000018776	oscp1a	77	62.903	ENSUMAG00000001438	LSM10	57	62.903	Ursus_maritimus
ENSXCOG00000018776	oscp1a	81	60.156	ENSVVUG00000023209	LSM10	98	60.156	Vulpes_vulpes
ENSXCOG00000018776	oscp1a	76	58.678	ENSXETG00000027631	lsm10	98	58.678	Xenopus_tropicalis
ENSXCOG00000018776	oscp1a	68	99.074	ENSXMAG00000019963	oscp1a	86	99.074	Xiphophorus_maculatus