EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018826 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4717 bases
Position: chrKQ557205.1:382257-386973
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025219	RRM_1	PF00076.22	3.8e-32	1	2
ENSXCOP00000025219	RRM_1	PF00076.22	3.8e-32	2	2
ENSXCOP00000025222	RRM_1	PF00076.22	8.4e-31	1	2
ENSXCOP00000025222	RRM_1	PF00076.22	8.4e-31	2	2
ENSXCOP00000025225	RRM_1	PF00076.22	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025527	-	1080	-	ENSXCOP00000025222	359 (aa)	-	-
ENSXCOT00000025524	-	1143	-	ENSXCOP00000025219	380 (aa)	-	-
ENSXCOT00000025530	-	399	-	ENSXCOP00000025225	132 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018826	srsf4	89	62.295	ENSXCOG00000001570	srsf5b	62	65.193
ENSXCOG00000018826	srsf4	72	30.769	ENSXCOG00000005917	srsf2a	50	31.532
ENSXCOG00000018826	srsf4	54	45.946	ENSXCOG00000010843	srsf7b	54	46.835
ENSXCOG00000018826	srsf4	89	61.290	ENSXCOG00000015338	srsf5a	60	63.587
ENSXCOG00000018826	srsf4	87	41.322	ENSXCOG00000017888	-	83	43.350
ENSXCOG00000018826	srsf4	89	66.400	ENSXCOG00000003212	-	55	73.822
ENSXCOG00000018826	srsf4	68	35.354	ENSXCOG00000008262	cirbpa	90	37.815
ENSXCOG00000018826	srsf4	55	43.421	ENSXCOG00000008757	-	63	39.815
ENSXCOG00000018826	srsf4	87	42.149	ENSXCOG00000009643	-	71	47.093
ENSXCOG00000018826	srsf4	81	31.193	ENSXCOG00000003730	-	67	31.193
ENSXCOG00000018826	srsf4	57	46.154	ENSXCOG00000009381	srsf7a	62	45.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018826	srsf4	89	81.513	ENSG00000116350	SRSF4	69	77.419	Homo_sapiens
ENSXCOG00000018826	srsf4	89	85.593	ENSAPOG00000020244	srsf4	99	68.919	Acanthochromis_polyacanthus
ENSXCOG00000018826	srsf4	89	71.667	ENSAPOG00000023399	-	60	76.374	Acanthochromis_polyacanthus
ENSXCOG00000018826	srsf4	89	91.525	ENSACIG00000018649	srsf4	93	95.588	Amphilophus_citrinellus
ENSXCOG00000018826	srsf4	89	93.220	ENSAOCG00000005997	srsf4	92	92.771	Amphiprion_ocellaris
ENSXCOG00000018826	srsf4	66	96.552	ENSAPEG00000020870	-	67	96.552	Amphiprion_percula
ENSXCOG00000018826	srsf4	71	63.218	ENSAPEG00000020826	srsf4	87	64.854	Amphiprion_percula
ENSXCOG00000018826	srsf4	87	91.453	ENSATEG00000005680	srsf4	60	89.503	Anabas_testudineus
ENSXCOG00000018826	srsf4	89	87.288	ENSACLG00000003395	srsf4	99	95.588	Astatotilapia_calliptera
ENSXCOG00000018826	srsf4	89	71.429	ENSACLG00000021269	-	51	76.087	Astatotilapia_calliptera
ENSXCOG00000018826	srsf4	89	85.593	ENSAMXG00000034811	srsf4	81	89.157	Astyanax_mexicanus
ENSXCOG00000018826	srsf4	89	50.000	WBGene00004698	rsp-1	97	53.103	Caenorhabditis_elegans
ENSXCOG00000018826	srsf4	89	81.513	ENSCPOG00000036234	SRSF4	71	57.851	Cavia_porcellus
ENSXCOG00000018826	srsf4	89	81.513	ENSCLAG00000009008	SRSF4	72	57.459	Chinchilla_lanigera
ENSXCOG00000018826	srsf4	62	74.699	ENSCHOG00000013858	SRSF4	70	52.160	Choloepus_hoffmanni
ENSXCOG00000018826	srsf4	89	57.252	ENSCING00000020631	-	80	61.026	Ciona_intestinalis
ENSXCOG00000018826	srsf4	89	52.857	ENSCING00000012370	-	68	63.000	Ciona_intestinalis
ENSXCOG00000018826	srsf4	89	58.400	ENSCING00000011362	-	65	60.109	Ciona_intestinalis
ENSXCOG00000018826	srsf4	89	50.376	ENSCING00000024718	-	56	56.784	Ciona_intestinalis
ENSXCOG00000018826	srsf4	89	62.712	ENSCSAVG00000002581	-	70	64.641	Ciona_savignyi
ENSXCOG00000018826	srsf4	89	85.246	ENSCSEG00000010058	srsf4	75	90.400	Cynoglossus_semilaevis
ENSXCOG00000018826	srsf4	79	63.877	ENSCVAG00000004342	srsf4	94	61.172	Cyprinodon_variegatus
ENSXCOG00000018826	srsf4	89	83.898	ENSDARG00000105293	srsf4	80	88.235	Danio_rerio
ENSXCOG00000018826	srsf4	89	81.513	ENSDORG00000002459	Srsf4	52	65.649	Dipodomys_ordii
ENSXCOG00000018826	srsf4	90	57.258	FBgn0004587	B52	97	58.015	Drosophila_melanogaster
ENSXCOG00000018826	srsf4	80	51.351	ENSEBUG00000003129	srsf4	69	62.745	Eptatretus_burgeri
ENSXCOG00000018826	srsf4	89	59.322	ENSEBUG00000001681	srsf4	67	60.556	Eptatretus_burgeri
ENSXCOG00000018826	srsf4	89	71.311	ENSELUG00000017551	srsf4	93	77.099	Esox_lucius
ENSXCOG00000018826	srsf4	95	87.786	ENSFHEG00000007472	srsf4	91	98.824	Fundulus_heteroclitus
ENSXCOG00000018826	srsf4	89	80.508	ENSGMOG00000012906	srsf4	57	89.944	Gadus_morhua
ENSXCOG00000018826	srsf4	93	95.082	ENSGAFG00000018496	srsf4	95	95.588	Gambusia_affinis
ENSXCOG00000018826	srsf4	89	88.983	ENSGACG00000002389	srsf4	98	60.961	Gasterosteus_aculeatus
ENSXCOG00000018826	srsf4	89	71.429	ENSHBUG00000011326	-	51	75.393	Haplochromis_burtoni
ENSXCOG00000018826	srsf4	58	98.684	ENSHBUG00000016897	-	98	80.556	Haplochromis_burtoni
ENSXCOG00000018826	srsf4	89	81.513	ENSHGLG00000011842	SRSF4	71	56.863	Heterocephalus_glaber_female
ENSXCOG00000018826	srsf4	89	81.513	ENSHGLG00100017279	SRSF4	71	56.863	Heterocephalus_glaber_male
ENSXCOG00000018826	srsf4	89	88.430	ENSHCOG00000012540	srsf4	92	98.485	Hippocampus_comes
ENSXCOG00000018826	srsf4	89	81.513	ENSSTOG00000015908	SRSF4	52	65.152	Ictidomys_tridecemlineatus
ENSXCOG00000018826	srsf4	89	94.068	ENSKMAG00000013631	srsf4	99	75.281	Kryptolebias_marmoratus
ENSXCOG00000018826	srsf4	56	100.000	ENSLBEG00000017163	-	76	98.780	Labrus_bergylta
ENSXCOG00000018826	srsf4	89	71.667	ENSLOCG00000001442	-	87	58.006	Lepisosteus_oculatus
ENSXCOG00000018826	srsf4	89	81.513	ENSLAFG00000002575	SRSF4	75	57.396	Loxodonta_africana
ENSXCOG00000018826	srsf4	89	93.220	ENSMAMG00000004888	srsf4	99	95.588	Mastacembelus_armatus
ENSXCOG00000018826	srsf4	89	87.288	ENSMZEG00005026275	srsf4	98	71.429	Maylandia_zebra
ENSXCOG00000018826	srsf4	58	98.684	ENSMZEG00005025078	-	94	82.692	Maylandia_zebra
ENSXCOG00000018826	srsf4	89	81.513	ENSMICG00000043567	SRSF4	79	53.500	Microcebus_murinus
ENSXCOG00000018826	srsf4	89	87.288	ENSMMOG00000013653	srsf4	95	95.588	Mola_mola
ENSXCOG00000018826	srsf4	89	81.513	ENSMODG00000011052	SRSF4	56	85.326	Monodelphis_domestica
ENSXCOG00000018826	srsf4	89	92.437	ENSMALG00000013392	srsf4	99	95.588	Monopterus_albus
ENSXCOG00000018826	srsf4	65	70.930	ENSMALG00000010062	-	90	70.930	Monopterus_albus
ENSXCOG00000018826	srsf4	89	81.513	ENSMPUG00000015470	SRSF4	70	57.500	Mustela_putorius_furo
ENSXCOG00000018826	srsf4	58	98.684	ENSNBRG00000014840	-	77	97.561	Neolamprologus_brichardi
ENSXCOG00000018826	srsf4	89	63.333	ENSNLEG00000030787	-	62	72.571	Nomascus_leucogenys
ENSXCOG00000018826	srsf4	89	87.288	ENSONIG00000013730	srsf4	93	73.626	Oreochromis_niloticus
ENSXCOG00000018826	srsf4	62	98.780	ENSORLG00000028783	-	75	98.780	Oryzias_latipes
ENSXCOG00000018826	srsf4	95	86.260	ENSORLG00020016052	srsf4	66	95.082	Oryzias_latipes_hni
ENSXCOG00000018826	srsf4	89	93.220	ENSORLG00015007566	srsf4	93	95.588	Oryzias_latipes_hsok
ENSXCOG00000018826	srsf4	95	86.260	ENSOMEG00000005541	srsf4	94	75.219	Oryzias_melastigma
ENSXCOG00000018826	srsf4	89	81.513	ENSOGAG00000015515	SRSF4	65	59.941	Otolemur_garnettii
ENSXCOG00000018826	srsf4	65	74.713	ENSOARG00000002451	SRSF4	50	78.065	Ovis_aries
ENSXCOG00000018826	srsf4	98	84.211	ENSPMGG00000013436	srsf4	93	94.118	Periophthalmus_magnuspinnatus
ENSXCOG00000018826	srsf4	89	60.833	ENSPMAG00000009397	srsf4	68	65.241	Petromyzon_marinus
ENSXCOG00000018826	srsf4	95	88.550	ENSPFOG00000001306	srsf4	94	88.663	Poecilia_formosa
ENSXCOG00000018826	srsf4	95	91.603	ENSPLAG00000008812	srsf4	91	94.203	Poecilia_latipinna
ENSXCOG00000018826	srsf4	95	91.603	ENSPMEG00000023638	srsf4	95	92.097	Poecilia_mexicana
ENSXCOG00000018826	srsf4	99	93.075	ENSPREG00000009639	srsf4	94	95.652	Poecilia_reticulata
ENSXCOG00000018826	srsf4	89	81.513	ENSPCAG00000009879	SRSF4	73	57.453	Procavia_capensis
ENSXCOG00000018826	srsf4	89	88.983	ENSPNYG00000003796	srsf4	56	93.989	Pundamilia_nyererei
ENSXCOG00000018826	srsf4	89	86.441	ENSPNAG00000023844	srsf4	54	89.071	Pygocentrus_nattereri
ENSXCOG00000018826	srsf4	89	81.513	ENSRNOG00000010007	Srsf4	72	56.704	Rattus_norvegicus
ENSXCOG00000018826	srsf4	66	75.000	ENSSHAG00000012407	SRSF4	51	82.353	Sarcophilus_harrisii
ENSXCOG00000018826	srsf4	89	88.136	ENSSFOG00015020292	srsf4	82	89.189	Scleropages_formosus
ENSXCOG00000018826	srsf4	89	91.667	ENSSMAG00000001707	srsf4	50	94.054	Scophthalmus_maximus
ENSXCOG00000018826	srsf4	95	86.260	ENSSDUG00000007387	srsf4	99	68.347	Seriola_dumerili
ENSXCOG00000018826	srsf4	89	66.102	ENSSLDG00000009745	srsf4	61	81.871	Seriola_lalandi_dorsalis
ENSXCOG00000018826	srsf4	64	80.233	ENSSPUG00000019124	-	97	80.233	Sphenodon_punctatus
ENSXCOG00000018826	srsf4	98	81.955	ENSSPAG00000014538	srsf4	83	92.437	Stegastes_partitus
ENSXCOG00000018826	srsf4	89	87.288	ENSTRUG00000011891	srsf4	100	66.755	Takifugu_rubripes
ENSXCOG00000018826	srsf4	89	81.513	ENSTTRG00000002572	SRSF4	67	56.657	Tursiops_truncatus
ENSXCOG00000018826	srsf4	89	81.513	ENSUAMG00000006106	SRSF4	61	61.783	Ursus_americanus
ENSXCOG00000018826	srsf4	65	74.713	ENSVVUG00000012690	SRSF4	65	53.312	Vulpes_vulpes
ENSXCOG00000018826	srsf4	63	100.000	ENSXMAG00000021549	-	70	100.000	Xiphophorus_maculatus