EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018917 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4484 bases
Position: chrKQ557221.1:21376943-21381426
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025333	La	PF05383.17	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025640	-	1137	-	ENSXCOP00000025333	378 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018917	-	88	31.407	ENSXCOG00000012654	larp6a	82	31.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018917	-	94	53.994	ENSAPOG00000003568	-	96	53.994	Acanthochromis_polyacanthus
ENSXCOG00000018917	-	92	53.333	ENSACIG00000008349	-	83	53.333	Amphilophus_citrinellus
ENSXCOG00000018917	-	93	55.556	ENSAOCG00000004646	larp6b	94	55.556	Amphiprion_ocellaris
ENSXCOG00000018917	-	94	55.914	ENSAPEG00000022748	-	93	55.914	Amphiprion_percula
ENSXCOG00000018917	-	94	55.764	ENSATEG00000021222	-	94	55.764	Anabas_testudineus
ENSXCOG00000018917	-	91	53.073	ENSACLG00000009988	larp6b	90	53.073	Astatotilapia_calliptera
ENSXCOG00000018917	-	52	48.780	ENSAMXG00000018956	larp6b	85	33.578	Astyanax_mexicanus
ENSXCOG00000018917	-	53	30.846	ENSCING00000018361	-	68	30.846	Ciona_intestinalis
ENSXCOG00000018917	-	99	67.460	ENSCVAG00000012145	-	97	67.460	Cyprinodon_variegatus
ENSXCOG00000018917	-	51	48.485	ENSDARG00000003968	larp6b	53	57.746	Danio_rerio
ENSXCOG00000018917	-	95	80.780	ENSFHEG00000010409	-	85	80.780	Fundulus_heteroclitus
ENSXCOG00000018917	-	94	97.486	ENSGAFG00000020138	-	90	97.486	Gambusia_affinis
ENSXCOG00000018917	-	91	52.793	ENSHBUG00000012344	larp6b	89	52.793	Haplochromis_burtoni
ENSXCOG00000018917	-	53	45.098	ENSIPUG00000007609	larp6b	85	33.747	Ictalurus_punctatus
ENSXCOG00000018917	-	92	54.469	ENSLBEG00000016460	-	98	54.294	Labrus_bergylta
ENSXCOG00000018917	-	93	56.011	ENSMAMG00000005509	-	91	56.011	Mastacembelus_armatus
ENSXCOG00000018917	-	91	52.793	ENSMZEG00005024390	larp6b	90	52.793	Maylandia_zebra
ENSXCOG00000018917	-	93	52.162	ENSNBRG00000012748	larp6b	92	52.162	Neolamprologus_brichardi
ENSXCOG00000018917	-	88	36.250	ENSPKIG00000025605	larp6b	82	35.338	Paramormyrops_kingsleyae
ENSXCOG00000018917	-	93	97.727	ENSPLAG00000005133	-	97	97.727	Poecilia_latipinna
ENSXCOG00000018917	-	93	98.011	ENSPMEG00000019947	-	99	98.011	Poecilia_mexicana
ENSXCOG00000018917	-	95	96.953	ENSPREG00000011853	-	89	96.953	Poecilia_reticulata
ENSXCOG00000018917	-	93	50.806	ENSPNYG00000007025	larp6b	89	50.806	Pundamilia_nyererei
ENSXCOG00000018917	-	87	35.980	ENSPNAG00000023854	larp6b	84	35.980	Pygocentrus_nattereri
ENSXCOG00000018917	-	68	62.738	ENSSDUG00000009842	-	80	62.738	Seriola_dumerili
ENSXCOG00000018917	-	88	57.061	ENSSLDG00000017081	-	80	57.061	Seriola_lalandi_dorsalis
ENSXCOG00000018917	-	92	55.526	ENSSPAG00000014320	-	90	55.703	Stegastes_partitus
ENSXCOG00000018917	-	95	100.000	ENSXMAG00000025734	-	96	100.000	Xiphophorus_maculatus