EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000018976 (Gene tree)
Gene ID: -
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex%2C subunit 3b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 23303 bases
Position: chrKQ557205.1:3823477-3846779
Accession: ZDB-GENE-030131-5838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025406	Not3	PF04065.15	1.3e-94	1	1
ENSXCOP00000025406	NOT2_3_5	PF04153.18	3.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000025713	-	2532	-	ENSXCOP00000025406	843 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000018976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000018976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000018976	cnot3b	71	89.316	ENSXCOG00000019460	cnot3a	79	91.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000018976	cnot3b	68	83.498	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSXCOG00000018976	cnot3b	53	92.520	ENSAPOG00000015002	cnot3b	64	92.208	Acanthochromis_polyacanthus
ENSXCOG00000018976	cnot3b	57	78.136	ENSAPOG00000015499	CNOT3	86	78.136	Acanthochromis_polyacanthus
ENSXCOG00000018976	cnot3b	69	82.623	ENSAMEG00000004528	CNOT3	74	88.583	Ailuropoda_melanoleuca
ENSXCOG00000018976	cnot3b	66	93.304	ENSACIG00000003652	cnot3b	90	94.545	Amphilophus_citrinellus
ENSXCOG00000018976	cnot3b	61	89.316	ENSACIG00000006635	cnot3a	79	91.441	Amphilophus_citrinellus
ENSXCOG00000018976	cnot3b	96	72.009	ENSAOCG00000018385	-	92	77.665	Amphiprion_ocellaris
ENSXCOG00000018976	cnot3b	97	75.176	ENSAPEG00000002640	cnot3b	86	95.960	Amphiprion_percula
ENSXCOG00000018976	cnot3b	99	62.401	ENSATEG00000022737	cnot3a	96	62.108	Anabas_testudineus
ENSXCOG00000018976	cnot3b	99	78.271	ENSATEG00000015777	cnot3b	99	76.829	Anabas_testudineus
ENSXCOG00000018976	cnot3b	73	72.996	ENSACAG00000016085	CNOT3	77	89.370	Anolis_carolinensis
ENSXCOG00000018976	cnot3b	65	88.530	ENSANAG00000025756	CNOT3	74	88.976	Aotus_nancymaae
ENSXCOG00000018976	cnot3b	99	75.862	ENSACLG00000016702	cnot3b	97	75.583	Astatotilapia_calliptera
ENSXCOG00000018976	cnot3b	99	62.111	ENSAMXG00000012359	cnot3a	96	63.556	Astyanax_mexicanus
ENSXCOG00000018976	cnot3b	99	64.488	ENSAMXG00000009447	cnot3b	93	89.610	Astyanax_mexicanus
ENSXCOG00000018976	cnot3b	65	88.530	ENSBTAG00000014900	CNOT3	74	88.976	Bos_taurus
ENSXCOG00000018976	cnot3b	65	88.530	ENSCJAG00000001094	CNOT3	74	88.976	Callithrix_jacchus
ENSXCOG00000018976	cnot3b	69	82.951	ENSCAFG00000002699	CNOT3	74	88.976	Canis_familiaris
ENSXCOG00000018976	cnot3b	69	82.951	ENSCAFG00020018359	CNOT3	74	88.976	Canis_lupus_dingo
ENSXCOG00000018976	cnot3b	63	80.921	ENSCHIG00000015302	CNOT3	66	86.561	Capra_hircus
ENSXCOG00000018976	cnot3b	65	88.530	ENSTSYG00000008058	CNOT3	74	88.976	Carlito_syrichta
ENSXCOG00000018976	cnot3b	65	88.530	ENSCAPG00000009533	CNOT3	74	88.976	Cavia_aperea
ENSXCOG00000018976	cnot3b	65	88.530	ENSCPOG00000020741	CNOT3	74	88.976	Cavia_porcellus
ENSXCOG00000018976	cnot3b	65	88.530	ENSCCAG00000036290	CNOT3	74	88.976	Cebus_capucinus
ENSXCOG00000018976	cnot3b	65	88.530	ENSCATG00000030324	CNOT3	74	88.976	Cercocebus_atys
ENSXCOG00000018976	cnot3b	65	88.530	ENSCLAG00000003302	CNOT3	75	88.976	Chinchilla_lanigera
ENSXCOG00000018976	cnot3b	74	69.289	ENSCSAG00000001900	CNOT3	74	88.976	Chlorocebus_sabaeus
ENSXCOG00000018976	cnot3b	67	89.964	ENSCPBG00000011655	CNOT3	77	90.551	Chrysemys_picta_bellii
ENSXCOG00000018976	cnot3b	78	55.823	ENSCING00000000293	-	66	70.721	Ciona_intestinalis
ENSXCOG00000018976	cnot3b	68	83.498	ENSCANG00000013408	CNOT3	74	88.976	Colobus_angolensis_palliatus
ENSXCOG00000018976	cnot3b	77	71.277	ENSCGRG00001000855	Cnot3	74	89.370	Cricetulus_griseus_chok1gshd
ENSXCOG00000018976	cnot3b	51	69.302	ENSCGRG00000012929	Cnot3	71	69.159	Cricetulus_griseus_crigri
ENSXCOG00000018976	cnot3b	88	80.435	ENSCSEG00000016892	cnot3b	94	75.122	Cynoglossus_semilaevis
ENSXCOG00000018976	cnot3b	99	86.416	ENSCVAG00000022122	cnot3b	96	86.530	Cyprinodon_variegatus
ENSXCOG00000018976	cnot3b	99	68.161	ENSDARG00000019842	cnot3b	96	68.772	Danio_rerio
ENSXCOG00000018976	cnot3b	99	62.835	ENSDARG00000007135	cnot3a	96	63.636	Danio_rerio
ENSXCOG00000018976	cnot3b	68	83.168	ENSDNOG00000045972	CNOT3	74	88.583	Dasypus_novemcinctus
ENSXCOG00000018976	cnot3b	65	88.530	ENSDORG00000008021	Cnot3	74	88.976	Dipodomys_ordii
ENSXCOG00000018976	cnot3b	50	87.814	ENSETEG00000006305	CNOT3	53	88.189	Echinops_telfairi
ENSXCOG00000018976	cnot3b	61	67.778	ENSEBUG00000010437	cnot3a	57	71.705	Eptatretus_burgeri
ENSXCOG00000018976	cnot3b	99	60.419	ENSELUG00000014743	cnot3a	97	60.583	Esox_lucius
ENSXCOG00000018976	cnot3b	99	66.157	ENSELUG00000000953	cnot3b	97	69.197	Esox_lucius
ENSXCOG00000018976	cnot3b	79	69.543	ENSFCAG00000014042	CNOT3	74	88.976	Felis_catus
ENSXCOG00000018976	cnot3b	99	85.666	ENSFHEG00000001696	cnot3b	97	85.892	Fundulus_heteroclitus
ENSXCOG00000018976	cnot3b	70	89.744	ENSFHEG00000023166	cnot3a	71	91.892	Fundulus_heteroclitus
ENSXCOG00000018976	cnot3b	97	58.676	ENSGMOG00000005365	cnot3a	98	59.705	Gadus_morhua
ENSXCOG00000018976	cnot3b	99	92.571	ENSGAFG00000003459	cnot3b	96	92.571	Gambusia_affinis
ENSXCOG00000018976	cnot3b	54	62.397	ENSGACG00000009395	cnot3b	64	62.030	Gasterosteus_aculeatus
ENSXCOG00000018976	cnot3b	84	65.996	ENSGAGG00000012677	CNOT3	77	88.627	Gopherus_agassizii
ENSXCOG00000018976	cnot3b	68	83.498	ENSGGOG00000012996	CNOT3	75	88.976	Gorilla_gorilla
ENSXCOG00000018976	cnot3b	99	70.258	ENSHBUG00000019699	cnot3b	96	68.869	Haplochromis_burtoni
ENSXCOG00000018976	cnot3b	68	83.498	ENSHGLG00000008821	CNOT3	74	88.976	Heterocephalus_glaber_female
ENSXCOG00000018976	cnot3b	60	81.226	ENSHGLG00100006181	CNOT3	74	82.661	Heterocephalus_glaber_male
ENSXCOG00000018976	cnot3b	56	77.720	ENSHCOG00000020968	cnot3a	96	62.192	Hippocampus_comes
ENSXCOG00000018976	cnot3b	99	58.458	ENSIPUG00000000167	cnot3	96	57.859	Ictalurus_punctatus
ENSXCOG00000018976	cnot3b	99	67.366	ENSIPUG00000009046	cnot3b	96	66.394	Ictalurus_punctatus
ENSXCOG00000018976	cnot3b	65	88.530	ENSSTOG00000028248	CNOT3	74	88.976	Ictidomys_tridecemlineatus
ENSXCOG00000018976	cnot3b	65	88.889	ENSJJAG00000014594	Cnot3	74	89.370	Jaculus_jaculus
ENSXCOG00000018976	cnot3b	99	79.821	ENSKMAG00000018723	cnot3b	96	81.348	Kryptolebias_marmoratus
ENSXCOG00000018976	cnot3b	99	59.716	ENSKMAG00000004863	cnot3a	95	62.885	Kryptolebias_marmoratus
ENSXCOG00000018976	cnot3b	57	86.614	ENSLBEG00000017296	cnot3a	96	67.073	Labrus_bergylta
ENSXCOG00000018976	cnot3b	99	76.121	ENSLBEG00000018278	cnot3b	99	75.391	Labrus_bergylta
ENSXCOG00000018976	cnot3b	69	84.262	ENSLACG00000009742	CNOT3	76	90.551	Latimeria_chalumnae
ENSXCOG00000018976	cnot3b	52	92.000	ENSLOCG00000000005	cnot3b	74	92.000	Lepisosteus_oculatus
ENSXCOG00000018976	cnot3b	65	87.500	ENSLAFG00000022133	CNOT3	74	87.843	Loxodonta_africana
ENSXCOG00000018976	cnot3b	74	69.289	ENSMFAG00000040073	CNOT3	74	88.976	Macaca_fascicularis
ENSXCOG00000018976	cnot3b	61	89.076	ENSMMUG00000009698	CNOT3	69	98.571	Macaca_mulatta
ENSXCOG00000018976	cnot3b	65	88.530	ENSMNEG00000036750	CNOT3	74	88.976	Macaca_nemestrina
ENSXCOG00000018976	cnot3b	65	88.530	ENSMLEG00000036579	CNOT3	77	88.976	Mandrillus_leucophaeus
ENSXCOG00000018976	cnot3b	99	78.295	ENSMAMG00000019357	cnot3b	97	77.852	Mastacembelus_armatus
ENSXCOG00000018976	cnot3b	99	76.451	ENSMZEG00005002466	cnot3b	97	76.392	Maylandia_zebra
ENSXCOG00000018976	cnot3b	74	69.543	ENSMAUG00000014996	Cnot3	74	89.370	Mesocricetus_auratus
ENSXCOG00000018976	cnot3b	66	88.530	ENSMICG00000002370	CNOT3	74	88.976	Microcebus_murinus
ENSXCOG00000018976	cnot3b	69	89.744	ENSMMOG00000013086	cnot3b	92	91.892	Mola_mola
ENSXCOG00000018976	cnot3b	60	82.951	ENSMODG00000004066	CNOT3	65	88.976	Monodelphis_domestica
ENSXCOG00000018976	cnot3b	99	59.912	ENSMALG00000009204	cnot3a	96	61.436	Monopterus_albus
ENSXCOG00000018976	cnot3b	59	89.947	ENSMALG00000004936	cnot3b	71	89.011	Monopterus_albus
ENSXCOG00000018976	cnot3b	65	88.889	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSXCOG00000018976	cnot3b	65	88.889	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSXCOG00000018976	cnot3b	65	88.889	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSXCOG00000018976	cnot3b	65	88.889	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSXCOG00000018976	cnot3b	69	82.951	ENSMPUG00000010352	CNOT3	74	88.976	Mustela_putorius_furo
ENSXCOG00000018976	cnot3b	69	82.951	ENSNGAG00000013266	Cnot3	74	88.976	Nannospalax_galili
ENSXCOG00000018976	cnot3b	81	87.823	ENSNBRG00000003336	cnot3b	91	89.720	Neolamprologus_brichardi
ENSXCOG00000018976	cnot3b	74	69.036	ENSNLEG00000006272	CNOT3	73	88.976	Nomascus_leucogenys
ENSXCOG00000018976	cnot3b	65	88.530	ENSODEG00000000705	CNOT3	74	88.976	Octodon_degus
ENSXCOG00000018976	cnot3b	99	77.232	ENSONIG00000007047	cnot3b	97	76.233	Oreochromis_niloticus
ENSXCOG00000018976	cnot3b	74	69.543	ENSOCUG00000007691	CNOT3	74	88.976	Oryctolagus_cuniculus
ENSXCOG00000018976	cnot3b	99	76.655	ENSORLG00000005982	cnot3b	96	76.517	Oryzias_latipes
ENSXCOG00000018976	cnot3b	99	76.067	ENSORLG00020005779	cnot3b	96	76.180	Oryzias_latipes_hni
ENSXCOG00000018976	cnot3b	99	75.615	ENSORLG00015019021	cnot3b	96	75.839	Oryzias_latipes_hsok
ENSXCOG00000018976	cnot3b	92	76.812	ENSOMEG00000010309	cnot3a	96	62.099	Oryzias_melastigma
ENSXCOG00000018976	cnot3b	99	77.365	ENSOMEG00000015557	cnot3b	96	76.715	Oryzias_melastigma
ENSXCOG00000018976	cnot3b	65	88.530	ENSOGAG00000006945	CNOT3	74	88.976	Otolemur_garnettii
ENSXCOG00000018976	cnot3b	68	83.498	ENSPPAG00000002748	CNOT3	74	88.976	Pan_paniscus
ENSXCOG00000018976	cnot3b	79	69.543	ENSPPRG00000011705	CNOT3	74	88.976	Panthera_pardus
ENSXCOG00000018976	cnot3b	67	78.378	ENSPTIG00000008781	CNOT3	83	88.976	Panthera_tigris_altaica
ENSXCOG00000018976	cnot3b	68	83.498	ENSPTRG00000046717	-	74	88.976	Pan_troglodytes
ENSXCOG00000018976	cnot3b	68	83.498	ENSPTRG00000011444	CNOT3	74	88.976	Pan_troglodytes
ENSXCOG00000018976	cnot3b	65	88.530	ENSPANG00000009375	CNOT3	74	88.976	Papio_anubis
ENSXCOG00000018976	cnot3b	99	66.783	ENSPKIG00000015967	-	86	95.495	Paramormyrops_kingsleyae
ENSXCOG00000018976	cnot3b	99	61.147	ENSPKIG00000011733	CNOT3	97	61.153	Paramormyrops_kingsleyae
ENSXCOG00000018976	cnot3b	97	68.246	ENSPMGG00000022539	cnot3b	99	63.915	Periophthalmus_magnuspinnatus
ENSXCOG00000018976	cnot3b	73	71.277	ENSPEMG00000024185	Cnot3	74	89.370	Peromyscus_maniculatus_bairdii
ENSXCOG00000018976	cnot3b	69	83.279	ENSPCIG00000023018	CNOT3	80	89.370	Phascolarctos_cinereus
ENSXCOG00000018976	cnot3b	71	85.827	ENSPFOG00000008693	cnot3a	74	85.827	Poecilia_formosa
ENSXCOG00000018976	cnot3b	99	93.371	ENSPFOG00000007168	cnot3b	96	93.371	Poecilia_formosa
ENSXCOG00000018976	cnot3b	100	93.816	ENSPLAG00000013457	cnot3b	96	93.582	Poecilia_latipinna
ENSXCOG00000018976	cnot3b	100	93.932	ENSPMEG00000010184	cnot3b	98	93.932	Poecilia_mexicana
ENSXCOG00000018976	cnot3b	99	88.023	ENSPREG00000000662	cnot3b	98	87.558	Poecilia_reticulata
ENSXCOG00000018976	cnot3b	51	86.768	ENSPREG00000000766	-	100	86.117	Poecilia_reticulata
ENSXCOG00000018976	cnot3b	66	86.290	ENSPREG00000007592	cnot3a	86	86.290	Poecilia_reticulata
ENSXCOG00000018976	cnot3b	68	83.168	ENSPPYG00000010372	CNOT3	74	88.583	Pongo_abelii
ENSXCOG00000018976	cnot3b	69	82.951	ENSPCOG00000017673	CNOT3	73	88.976	Propithecus_coquereli
ENSXCOG00000018976	cnot3b	65	87.814	ENSPVAG00000015564	CNOT3	74	88.189	Pteropus_vampyrus
ENSXCOG00000018976	cnot3b	99	71.008	ENSPNYG00000003358	cnot3b	96	69.457	Pundamilia_nyererei
ENSXCOG00000018976	cnot3b	57	80.702	ENSPNAG00000017679	cnot3a	96	62.583	Pygocentrus_nattereri
ENSXCOG00000018976	cnot3b	99	67.381	ENSPNAG00000027459	cnot3b	96	67.869	Pygocentrus_nattereri
ENSXCOG00000018976	cnot3b	65	88.889	ENSRNOG00000053234	Cnot3	74	89.370	Rattus_norvegicus
ENSXCOG00000018976	cnot3b	74	69.289	ENSRBIG00000031025	CNOT3	74	88.976	Rhinopithecus_bieti
ENSXCOG00000018976	cnot3b	74	69.543	ENSRROG00000003872	CNOT3	74	88.976	Rhinopithecus_roxellana
ENSXCOG00000018976	cnot3b	65	88.530	ENSSBOG00000030268	CNOT3	74	88.976	Saimiri_boliviensis_boliviensis
ENSXCOG00000018976	cnot3b	99	66.102	ENSSFOG00015000248	cnot3	97	66.592	Scleropages_formosus
ENSXCOG00000018976	cnot3b	99	65.345	ENSSFOG00015019203	-	96	65.914	Scleropages_formosus
ENSXCOG00000018976	cnot3b	99	75.138	ENSSMAG00000016031	cnot3b	97	74.615	Scophthalmus_maximus
ENSXCOG00000018976	cnot3b	61	89.744	ENSSDUG00000008181	cnot3a	79	91.892	Seriola_dumerili
ENSXCOG00000018976	cnot3b	99	77.901	ENSSDUG00000003428	cnot3b	97	78.761	Seriola_dumerili
ENSXCOG00000018976	cnot3b	99	77.901	ENSSLDG00000014376	cnot3b	97	78.761	Seriola_lalandi_dorsalis
ENSXCOG00000018976	cnot3b	82	69.136	ENSSPUG00000008510	CNOT3	77	89.764	Sphenodon_punctatus
ENSXCOG00000018976	cnot3b	80	86.220	ENSSPAG00000003858	cnot3a	99	63.117	Stegastes_partitus
ENSXCOG00000018976	cnot3b	99	78.556	ENSSPAG00000001429	cnot3b	97	80.355	Stegastes_partitus
ENSXCOG00000018976	cnot3b	69	82.951	ENSSSCG00000003264	CNOT3	74	88.976	Sus_scrofa
ENSXCOG00000018976	cnot3b	99	89.937	ENSTRUG00000007248	cnot3b	88	89.937	Takifugu_rubripes
ENSXCOG00000018976	cnot3b	97	69.362	ENSTNIG00000005663	cnot3b	100	69.965	Tetraodon_nigroviridis
ENSXCOG00000018976	cnot3b	69	82.623	ENSUAMG00000005234	CNOT3	74	88.583	Ursus_americanus
ENSXCOG00000018976	cnot3b	71	87.097	ENSUMAG00000010934	CNOT3	80	91.892	Ursus_maritimus
ENSXCOG00000018976	cnot3b	66	88.530	ENSVVUG00000008239	CNOT3	77	88.976	Vulpes_vulpes
ENSXCOG00000018976	cnot3b	99	56.561	ENSXETG00000003166	cnot3	76	88.627	Xenopus_tropicalis
ENSXCOG00000018976	cnot3b	99	94.743	ENSXMAG00000014176	cnot3b	96	94.743	Xiphophorus_maculatus
ENSXCOG00000018976	cnot3b	99	60.899	ENSXMAG00000012273	cnot3a	96	60.619	Xiphophorus_maculatus