EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000019109 (Gene tree)
Gene ID
-
Gene Symbol
ssb
Alias
wu:fb17f11
Full Name
Sjogren syndrome antigen B (autoantigen La)
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
5138 bases
Position
chrKQ557222.1:13442173-13447310
Accession
ZDB-GENE-030131-223
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000025578RRM_1PF00076.223.8e-1211
ENSXCOP00000025578RRM_3PF08777.119.4e-2811
ENSXCOP00000025576LaPF05383.176.6e-2111
ENSXCOP00000025578LaPF05383.173.7e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000025885-408-ENSXCOP00000025576135 (aa)--
ENSXCOT00000025887-1131-ENSXCOP00000025578376 (aa)--
Gene Model
Click here to download ENSXCOG00000019109's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019109's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000019109ssb7335.000ENSXCOG00000004883larp76731.613
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000019109ssb9361.719ENSG00000138385SSB9861.017Homo_sapiens
ENSXCOG00000019109ssb9780.914ENSAPOG00000003448ssb9780.914Acanthochromis_polyacanthus
ENSXCOG00000019109ssb9360.938ENSAMEG00000010507SSB9453.418Ailuropoda_melanoleuca
ENSXCOG00000019109ssb9876.515ENSACIG00000001738ssb9774.670Amphilophus_citrinellus
ENSXCOG00000019109ssb9780.914ENSAOCG00000020398ssb9780.914Amphiprion_ocellaris
ENSXCOG00000019109ssb9780.914ENSAPEG00000020395ssb9780.914Amphiprion_percula
ENSXCOG00000019109ssb9878.016ENSATEG00000016884ssb9378.016Anabas_testudineus
ENSXCOG00000019109ssb9363.281ENSAPLG00000006109SSB7758.154Anas_platyrhynchos
ENSXCOG00000019109ssb9759.398ENSACAG00000017008SSB9253.281Anolis_carolinensis
ENSXCOG00000019109ssb9360.938ENSANAG00000027195-9247.895Aotus_nancymaae
ENSXCOG00000019109ssb9969.974ENSACLG00000010798ssb9969.974Astatotilapia_calliptera
ENSXCOG00000019109ssb9366.667ENSAMXG00000012606ssb9161.290Astyanax_mexicanus
ENSXCOG00000019109ssb9855.703ENSBTAG00000008716SSB9355.438Bos_taurus
ENSXCOG00000019109ssb7649.020WBGene00016653C44E4.47635.855Caenorhabditis_elegans
ENSXCOG00000019109ssb9361.719ENSCJAG00000045073SSB9263.710Callithrix_jacchus
ENSXCOG00000019109ssb9361.719ENSCAFG00000012418SSB9455.352Canis_familiaris
ENSXCOG00000019109ssb9361.719ENSCAFG00020002900SSB9455.352Canis_lupus_dingo
ENSXCOG00000019109ssb9955.352ENSCHIG00000022624-9455.091Capra_hircus
ENSXCOG00000019109ssb9951.697ENSCHIG00000022196-8355.589Capra_hircus
ENSXCOG00000019109ssb9361.719ENSTSYG00000000097SSB9455.091Carlito_syrichta
ENSXCOG00000019109ssb9955.875ENSCPOG00000003338SSB9455.614Cavia_porcellus
ENSXCOG00000019109ssb9361.719ENSCCAG00000035147SSB9363.710Cebus_capucinus
ENSXCOG00000019109ssb9841.734ENSCATG00000042909-9041.463Cercocebus_atys
ENSXCOG00000019109ssb7050.000ENSCATG00000036701SSB7749.627Cercocebus_atys
ENSXCOG00000019109ssb9361.719ENSCLAG00000004563-9761.935Chinchilla_lanigera
ENSXCOG00000019109ssb9955.352ENSCLAG00000015617-9455.091Chinchilla_lanigera
ENSXCOG00000019109ssb9361.719ENSCSAG00000015200SSB8354.569Chlorocebus_sabaeus
ENSXCOG00000019109ssb9358.594ENSCSAG00000018390-9650.914Chlorocebus_sabaeus
ENSXCOG00000019109ssb9361.719ENSCHOG00000007763SSB9454.569Choloepus_hoffmanni
ENSXCOG00000019109ssb9364.844ENSCPBG00000006519SSB9158.839Chrysemys_picta_bellii
ENSXCOG00000019109ssb9848.378ENSCANG00000033240-9347.520Colobus_angolensis_palliatus
ENSXCOG00000019109ssb9842.781ENSCANG00000028838-8842.513Colobus_angolensis_palliatus
ENSXCOG00000019109ssb9361.719ENSCANG00000027695SSB9454.569Colobus_angolensis_palliatus
ENSXCOG00000019109ssb9358.594ENSCGRG00001024831Ssb9152.815Cricetulus_griseus_chok1gshd
ENSXCOG00000019109ssb9358.594ENSCGRG00000005387Ssb9152.815Cricetulus_griseus_crigri
ENSXCOG00000019109ssb9578.846ENSCSEG00000011599ssb9178.846Cynoglossus_semilaevis
ENSXCOG00000019109ssb9385.714ENSCVAG00000021558ssb9385.523Cyprinodon_variegatus
ENSXCOG00000019109ssb9371.429ENSDARG00000029252ssb9362.567Danio_rerio
ENSXCOG00000019109ssb9361.719ENSDNOG00000013450SSB9454.830Dasypus_novemcinctus
ENSXCOG00000019109ssb9360.938ENSDORG00000005543Ssb9254.178Dipodomys_ordii
ENSXCOG00000019109ssb7550.000FBgn0011638La8035.802Drosophila_melanogaster
ENSXCOG00000019109ssb7966.038ENSETEG00000004614-5062.051Echinops_telfairi
ENSXCOG00000019109ssb9446.648ENSEBUG00000001237ssb8347.335Eptatretus_burgeri
ENSXCOG00000019109ssb9361.719ENSEASG00005022835SSB9255.703Equus_asinus_asinus
ENSXCOG00000019109ssb9361.719ENSECAG00000018495SSB9255.703Equus_caballus
ENSXCOG00000019109ssb9360.938ENSEEUG00000008077SSB7847.351Erinaceus_europaeus
ENSXCOG00000019109ssb9967.810ENSELUG00000020929ssb9465.172Esox_lucius
ENSXCOG00000019109ssb9956.136ENSFCAG00000011601SSB9455.875Felis_catus
ENSXCOG00000019109ssb9362.500ENSFALG00000000930SSB9454.948Ficedula_albicollis
ENSXCOG00000019109ssb9955.352ENSFDAG00000000598SSB9455.091Fukomys_damarensis
ENSXCOG00000019109ssb7778.146ENSFHEG00000003268ssb9778.413Fundulus_heteroclitus
ENSXCOG00000019109ssb8491.228ENSFHEG00000003003-10089.655Fundulus_heteroclitus
ENSXCOG00000019109ssb9668.649ENSGMOG00000002664ssb9368.649Gadus_morhua
ENSXCOG00000019109ssb9362.500ENSGALG00000009677SSB9254.474Gallus_gallus
ENSXCOG00000019109ssb9692.371ENSGAFG00000002749ssb9492.308Gambusia_affinis
ENSXCOG00000019109ssb9771.809ENSGACG00000005107ssb9371.809Gasterosteus_aculeatus
ENSXCOG00000019109ssb9364.062ENSGAGG00000007807SSB9158.311Gopherus_agassizii
ENSXCOG00000019109ssb7965.421ENSGGOG00000011507-8865.385Gorilla_gorilla
ENSXCOG00000019109ssb9946.475ENSGGOG00000024891-9345.953Gorilla_gorilla
ENSXCOG00000019109ssb9771.003ENSHBUG00000006584ssb9271.003Haplochromis_burtoni
ENSXCOG00000019109ssb9949.351ENSHGLG00000004478-9449.091Heterocephalus_glaber_female
ENSXCOG00000019109ssb9360.156ENSHGLG00000018387-9561.290Heterocephalus_glaber_female
ENSXCOG00000019109ssb9357.812ENSHGLG00000005832-9750.131Heterocephalus_glaber_female
ENSXCOG00000019109ssb9955.013ENSHGLG00000017580-9454.381Heterocephalus_glaber_female
ENSXCOG00000019109ssb7070.526ENSHGLG00000001810-7860.976Heterocephalus_glaber_female
ENSXCOG00000019109ssb8461.739ENSHGLG00000011331-9759.355Heterocephalus_glaber_female
ENSXCOG00000019109ssb10049.219ENSHGLG00100008767-9548.958Heterocephalus_glaber_male
ENSXCOG00000019109ssb8446.957ENSHGLG00100008353-6346.622Heterocephalus_glaber_male
ENSXCOG00000019109ssb9359.375ENSHGLG00100013137-7364.706Heterocephalus_glaber_male
ENSXCOG00000019109ssb9358.594ENSHGLG00100007213-8158.861Heterocephalus_glaber_male
ENSXCOG00000019109ssb8962.295ENSHGLG00100006391-8964.407Heterocephalus_glaber_male
ENSXCOG00000019109ssb8662.185ENSHGLG00100003175-10062.185Heterocephalus_glaber_male
ENSXCOG00000019109ssb9955.013ENSHGLG00100003084-9454.381Heterocephalus_glaber_male
ENSXCOG00000019109ssb8463.478ENSHGLG00100014205-8560.131Heterocephalus_glaber_male
ENSXCOG00000019109ssb9572.727ENSHCOG00000019011ssb9272.404Hippocampus_comes
ENSXCOG00000019109ssb9369.841ENSIPUG00000003681SSB9061.081Ictalurus_punctatus
ENSXCOG00000019109ssb9361.719ENSSTOG00000008416SSB9454.047Ictidomys_tridecemlineatus
ENSXCOG00000019109ssb8943.840ENSJJAG00000016250-9244.220Jaculus_jaculus
ENSXCOG00000019109ssb9361.719ENSJJAG00000023158-9849.389Jaculus_jaculus
ENSXCOG00000019109ssb9779.301ENSKMAG00000017317ssb9379.301Kryptolebias_marmoratus
ENSXCOG00000019109ssb9778.437ENSLBEG00000017345ssb9478.437Labrus_bergylta
ENSXCOG00000019109ssb8466.087ENSLACG00000014056SSB9253.439Latimeria_chalumnae
ENSXCOG00000019109ssb9765.583ENSLOCG00000007933ssb9065.583Lepisosteus_oculatus
ENSXCOG00000019109ssb8350.877ENSLAFG00000026721-9742.177Loxodonta_africana
ENSXCOG00000019109ssb9361.719ENSLAFG00000000867-9451.134Loxodonta_africana
ENSXCOG00000019109ssb9353.906ENSLAFG00000028909-9346.073Loxodonta_africana
ENSXCOG00000019109ssb9361.719ENSMFAG00000039066SSB9362.698Macaca_fascicularis
ENSXCOG00000019109ssb9354.688ENSMFAG00000041478-9150.774Macaca_fascicularis
ENSXCOG00000019109ssb9840.379ENSMMUG00000039889-9041.734Macaca_mulatta
ENSXCOG00000019109ssb9361.719ENSMMUG00000023051SSB9362.698Macaca_mulatta
ENSXCOG00000019109ssb9355.469ENSMMUG00000011724-7850.774Macaca_mulatta
ENSXCOG00000019109ssb9361.719ENSMNEG00000028321SSB9362.698Macaca_nemestrina
ENSXCOG00000019109ssb9354.688ENSMNEG00000034698-9150.774Macaca_nemestrina
ENSXCOG00000019109ssb9840.000ENSMLEG00000042644-7941.176Mandrillus_leucophaeus
ENSXCOG00000019109ssb9361.719ENSMLEG00000035717SSB9164.706Mandrillus_leucophaeus
ENSXCOG00000019109ssb9779.301ENSMAMG00000004800ssb9379.301Mastacembelus_armatus
ENSXCOG00000019109ssb9969.974ENSMZEG00005005749ssb9969.974Maylandia_zebra
ENSXCOG00000019109ssb9362.500ENSMGAG00000010328SSB9560.914Meleagris_gallopavo
ENSXCOG00000019109ssb9358.594ENSMAUG00000019529-9960.265Mesocricetus_auratus
ENSXCOG00000019109ssb9361.719ENSMICG00000033304-9351.771Microcebus_murinus
ENSXCOG00000019109ssb9361.719ENSMICG00000028252-9455.091Microcebus_murinus
ENSXCOG00000019109ssb9359.375ENSMOCG00000001823-9960.927Microtus_ochrogaster
ENSXCOG00000019109ssb8483.333ENSMMOG00000002088-8983.333Mola_mola
ENSXCOG00000019109ssb9357.812ENSMODG00000019271-9343.501Monodelphis_domestica
ENSXCOG00000019109ssb9353.906ENSMODG00000007027-9343.651Monodelphis_domestica
ENSXCOG00000019109ssb9855.026ENSMODG00000008227-9355.026Monodelphis_domestica
ENSXCOG00000019109ssb9575.069ENSMALG00000008045ssb9074.133Monopterus_albus
ENSXCOG00000019109ssb9360.156MGP_CAROLIEiJ_G0023629-9958.696Mus_caroli
ENSXCOG00000019109ssb9360.156ENSMUSG00000068882Ssb9958.696Mus_musculus
ENSXCOG00000019109ssb9359.375MGP_PahariEiJ_G0025081-9958.152Mus_pahari
ENSXCOG00000019109ssb9360.156MGP_SPRETEiJ_G0024551Ssb9958.696Mus_spretus
ENSXCOG00000019109ssb9955.875ENSMPUG00000000785SSB9455.614Mustela_putorius_furo
ENSXCOG00000019109ssb9362.992ENSMLUG00000016316SSB9254.167Myotis_lucifugus
ENSXCOG00000019109ssb8762.500ENSNGAG00000012920-8662.500Nannospalax_galili
ENSXCOG00000019109ssb9969.974ENSNBRG00000012661ssb9970.027Neolamprologus_brichardi
ENSXCOG00000019109ssb9361.719ENSNLEG00000004958SSB9363.710Nomascus_leucogenys
ENSXCOG00000019109ssb9542.618ENSNLEG00000028754-7845.092Nomascus_leucogenys
ENSXCOG00000019109ssb7963.208ENSMEUG00000001650-10058.233Notamacropus_eugenii
ENSXCOG00000019109ssb9360.938ENSODEG00000010041-9861.314Octodon_degus
ENSXCOG00000019109ssb8955.425ENSODEG00000004202-9255.132Octodon_degus
ENSXCOG00000019109ssb7358.163ENSODEG00000006639-7757.246Octodon_degus
ENSXCOG00000019109ssb9361.719ENSODEG00000010185-9960.326Octodon_degus
ENSXCOG00000019109ssb9772.162ENSONIG00000008776ssb9272.162Oreochromis_niloticus
ENSXCOG00000019109ssb9359.375ENSOANG00000008543SSB9255.200Ornithorhynchus_anatinus
ENSXCOG00000019109ssb9361.719ENSOCUG00000010396SSB9454.047Oryctolagus_cuniculus
ENSXCOG00000019109ssb9382.540ENSORLG00000017208ssb9377.151Oryzias_latipes
ENSXCOG00000019109ssb9382.540ENSORLG00020022574ssb9377.005Oryzias_latipes_hni
ENSXCOG00000019109ssb9382.540ENSORLG00015016592ssb9377.688Oryzias_latipes_hsok
ENSXCOG00000019109ssb9381.746ENSOMEG00000003193ssb9377.540Oryzias_melastigma
ENSXCOG00000019109ssb9361.719ENSOGAG00000029768SSB9452.513Otolemur_garnettii
ENSXCOG00000019109ssb9954.404ENSOARG00000002906SSB9455.091Ovis_aries
ENSXCOG00000019109ssb8946.407ENSPPAG00000006189-8543.695Pan_paniscus
ENSXCOG00000019109ssb9361.719ENSPPAG00000042673SSB9363.710Pan_paniscus
ENSXCOG00000019109ssb9354.688ENSPPAG00000032427-10057.364Pan_paniscus
ENSXCOG00000019109ssb9956.136ENSPPRG00000006599SSB9455.875Panthera_pardus
ENSXCOG00000019109ssb9956.136ENSPTIG00000011021SSB9155.875Panthera_tigris_altaica
ENSXCOG00000019109ssb9945.646ENSPTRG00000042880-9345.383Pan_troglodytes
ENSXCOG00000019109ssb9361.719ENSPTRG00000012620SSB9363.710Pan_troglodytes
ENSXCOG00000019109ssb8742.857ENSPANG00000034126-7645.426Papio_anubis
ENSXCOG00000019109ssb9839.730ENSPANG00000031877-9038.360Papio_anubis
ENSXCOG00000019109ssb9361.719ENSPANG00000007440SSB9362.698Papio_anubis
ENSXCOG00000019109ssb9766.577ENSPKIG00000019325ssb9866.846Paramormyrops_kingsleyae
ENSXCOG00000019109ssb9366.406ENSPSIG00000002265SSB8558.575Pelodiscus_sinensis
ENSXCOG00000019109ssb9064.723ENSPMGG00000020075ssb9166.959Periophthalmus_magnuspinnatus
ENSXCOG00000019109ssb9358.594ENSPEMG00000021746-9960.265Peromyscus_maniculatus_bairdii
ENSXCOG00000019109ssb9545.013ENSPMAG00000002982ssb8944.882Petromyzon_marinus
ENSXCOG00000019109ssb9357.812ENSPCIG00000016333-9261.240Phascolarctos_cinereus
ENSXCOG00000019109ssb9856.267ENSPCIG00000028591-9456.053Phascolarctos_cinereus
ENSXCOG00000019109ssb9991.005ENSPFOG00000009650ssb9491.247Poecilia_formosa
ENSXCOG00000019109ssb9591.781ENSPLAG00000020498ssb9491.777Poecilia_latipinna
ENSXCOG00000019109ssb9991.005ENSPMEG00000001051ssb9491.247Poecilia_mexicana
ENSXCOG00000019109ssb10091.623ENSPREG00000003708ssb10091.623Poecilia_reticulata
ENSXCOG00000019109ssb9361.719ENSPPYG00000012919SSB9454.308Pongo_abelii
ENSXCOG00000019109ssb9454.775ENSPCAG00000010276SSB9354.775Procavia_capensis
ENSXCOG00000019109ssb9361.719ENSPCOG00000023189-9348.564Propithecus_coquereli
ENSXCOG00000019109ssb9360.156ENSPCOG00000015741-9860.976Propithecus_coquereli
ENSXCOG00000019109ssb9356.056ENSPVAG00000006615SSB9955.775Pteropus_vampyrus
ENSXCOG00000019109ssb9969.974ENSPNYG00000006444ssb9969.974Pundamilia_nyererei
ENSXCOG00000019109ssb9367.460ENSPNAG00000011708ssb9159.838Pygocentrus_nattereri
ENSXCOG00000019109ssb9360.156ENSRNOG00000007998Ssb7954.848Rattus_norvegicus
ENSXCOG00000019109ssb9359.375ENSRNOG00000011606AABR07061825.19252.830Rattus_norvegicus
ENSXCOG00000019109ssb8550.459ENSRBIG00000041608-8847.305Rhinopithecus_bieti
ENSXCOG00000019109ssb9147.674ENSRBIG00000041232-8852.518Rhinopithecus_bieti
ENSXCOG00000019109ssb9361.719ENSRBIG00000041972SSB9563.200Rhinopithecus_bieti
ENSXCOG00000019109ssb9839.037ENSRBIG00000029918-9038.770Rhinopithecus_bieti
ENSXCOG00000019109ssb9647.922ENSRROG00000031684-9153.595Rhinopithecus_roxellana
ENSXCOG00000019109ssb9844.118ENSRROG00000007149-9143.850Rhinopithecus_roxellana
ENSXCOG00000019109ssb9361.719ENSRROG00000040346SSB9362.698Rhinopithecus_roxellana
ENSXCOG00000019109ssb8552.905ENSRROG00000034102-8052.599Rhinopithecus_roxellana
ENSXCOG00000019109ssb9361.719ENSSBOG00000027204SSB9264.228Saimiri_boliviensis_boliviensis
ENSXCOG00000019109ssb9856.533ENSSHAG00000018062SSB9455.875Sarcophilus_harrisii
ENSXCOG00000019109ssb9370.635ENSSFOG00015000550ssb9166.846Scleropages_formosus
ENSXCOG00000019109ssb9777.151ENSSMAG00000013885ssb9977.957Scophthalmus_maximus
ENSXCOG00000019109ssb9780.645ENSSDUG00000020117ssb9380.645Seriola_dumerili
ENSXCOG00000019109ssb9778.962ENSSLDG00000002525ssb9378.689Seriola_lalandi_dorsalis
ENSXCOG00000019109ssb9450.139ENSSARG00000007747SSB9349.861Sorex_araneus
ENSXCOG00000019109ssb9365.625ENSSPUG00000012112SSB9157.333Sphenodon_punctatus
ENSXCOG00000019109ssb9780.914ENSSPAG00000005696ssb9780.914Stegastes_partitus
ENSXCOG00000019109ssb9360.156ENSSSCG00000015938SSB9151.892Sus_scrofa
ENSXCOG00000019109ssb9362.500ENSTGUG00000007942SSB9055.764Taeniopygia_guttata
ENSXCOG00000019109ssb9773.118ENSTRUG00000017839ssb9376.613Takifugu_rubripes
ENSXCOG00000019109ssb9378.571ENSTNIG00000000915ssb10071.662Tetraodon_nigroviridis
ENSXCOG00000019109ssb8466.087ENSTBEG00000009056SSB7466.087Tupaia_belangeri
ENSXCOG00000019109ssb9361.719ENSTTRG00000002152SSB9156.417Tursiops_truncatus
ENSXCOG00000019109ssb9955.643ENSUAMG00000027833SSB9955.381Ursus_americanus
ENSXCOG00000019109ssb9955.352ENSUMAG00000013907SSB9455.091Ursus_maritimus
ENSXCOG00000019109ssb9955.875ENSVPAG00000007183SSB9555.614Vicugna_pacos
ENSXCOG00000019109ssb9361.719ENSVVUG00000016573SSB7355.352Vulpes_vulpes
ENSXCOG00000019109ssb9853.457ENSXETG00000025402ssb8852.926Xenopus_tropicalis
ENSXCOG00000019109ssb9994.737ENSXMAG00000004888ssb9494.737Xiphophorus_maculatus

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