EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019310 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8507 bases
Position: chrKQ557221.1:23154335-23162841
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025837	MMR_HSR1	PF01926.23	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026147	-	735	-	ENSXCOP00000025837	244 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019310	rab12	70	41.279	ENSXCOG00000003428	rab42a	78	41.279
ENSXCOG00000019310	rab12	72	39.153	ENSXCOG00000000469	rab33ba	78	39.153
ENSXCOG00000019310	rab12	83	38.208	ENSXCOG00000009190	-	95	38.208
ENSXCOG00000019310	rab12	64	40.994	ENSXCOG00000008410	si:dkey-34d22.5	72	40.994
ENSXCOG00000019310	rab12	83	37.619	ENSXCOG00000004226	rab11al	95	37.619
ENSXCOG00000019310	rab12	70	40.588	ENSXCOG00000004227	rab25b	81	40.588
ENSXCOG00000019310	rab12	50	34.959	ENSXCOG00000011229	rras2	67	34.959
ENSXCOG00000019310	rab12	82	32.353	ENSXCOG00000020575	RAB9A	88	32.353
ENSXCOG00000019310	rab12	70	37.791	ENSXCOG00000016788	rab5c	78	37.791
ENSXCOG00000019310	rab12	77	37.500	ENSXCOG00000013344	rab33a	68	37.306
ENSXCOG00000019310	rab12	67	35.119	ENSXCOG00000019054	rab9a	76	35.119
ENSXCOG00000019310	rab12	70	38.372	ENSXCOG00000006300	-	75	38.372
ENSXCOG00000019310	rab12	69	51.479	ENSXCOG00000010770	-	67	51.479
ENSXCOG00000019310	rab12	82	38.350	ENSXCOG00000018683	zgc:101559	85	38.350
ENSXCOG00000019310	rab12	64	42.949	ENSXCOG00000006259	rab6a	75	42.949
ENSXCOG00000019310	rab12	64	41.667	ENSXCOG00000015802	RAB41	73	41.667
ENSXCOG00000019310	rab12	65	35.849	ENSXCOG00000016452	rab22a	81	35.849
ENSXCOG00000019310	rab12	76	37.368	ENSXCOG00000019921	rab7a	87	37.368
ENSXCOG00000019310	rab12	82	35.071	ENSXCOG00000016370	RAB29	97	35.071
ENSXCOG00000019310	rab12	71	46.552	ENSXCOG00000010695	zgc:171927	84	46.512
ENSXCOG00000019310	rab12	69	51.479	ENSXCOG00000013842	rab1ab	96	47.449
ENSXCOG00000019310	rab12	70	50.000	ENSXCOG00000019533	rab13	91	50.000
ENSXCOG00000019310	rab12	83	38.028	ENSXCOG00000001357	rab11a	78	38.028
ENSXCOG00000019310	rab12	75	31.522	ENSXCOG00000019281	rheb	95	31.522
ENSXCOG00000019310	rab12	78	38.220	ENSXCOG00000002232	rab6bb	91	38.220
ENSXCOG00000019310	rab12	68	41.667	ENSXCOG00000006807	rab39bb	78	41.667
ENSXCOG00000019310	rab12	67	34.524	ENSXCOG00000009094	rab9b	83	34.524
ENSXCOG00000019310	rab12	66	34.756	ENSXCOG00000009541	rab34a	63	34.756
ENSXCOG00000019310	rab12	73	37.989	ENSXCOG00000020121	rab5aa	81	37.989
ENSXCOG00000019310	rab12	86	37.264	ENSXCOG00000020125	rab25a	95	41.429
ENSXCOG00000019310	rab12	63	35.849	ENSXCOG00000011864	rab23	74	33.889
ENSXCOG00000019310	rab12	70	37.640	ENSXCOG00000012032	-	86	37.186
ENSXCOG00000019310	rab12	83	37.736	ENSXCOG00000008042	-	95	37.736
ENSXCOG00000019310	rab12	65	35.000	ENSXCOG00000007650	rras	87	34.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019310	rab12	100	78.138	ENSG00000206418	RAB12	100	82.186	Homo_sapiens
ENSXCOG00000019310	rab12	89	76.256	ENSAMEG00000007452	RAB12	94	79.909	Ailuropoda_melanoleuca
ENSXCOG00000019310	rab12	100	95.902	ENSACIG00000020616	rab12	100	95.902	Amphilophus_citrinellus
ENSXCOG00000019310	rab12	100	94.262	ENSAOCG00000002130	rab12	100	93.852	Amphiprion_ocellaris
ENSXCOG00000019310	rab12	100	94.262	ENSAPEG00000013255	rab12	100	93.852	Amphiprion_percula
ENSXCOG00000019310	rab12	100	93.852	ENSATEG00000019683	rab12	100	93.443	Anabas_testudineus
ENSXCOG00000019310	rab12	89	83.105	ENSACAG00000003360	RAB12	88	85.398	Anolis_carolinensis
ENSXCOG00000019310	rab12	100	95.082	ENSACLG00000007696	rab12	100	94.672	Astatotilapia_calliptera
ENSXCOG00000019310	rab12	100	86.179	ENSAMXG00000004882	rab12	100	86.992	Astyanax_mexicanus
ENSXCOG00000019310	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.186	Bos_taurus
ENSXCOG00000019310	rab12	93	82.456	ENSCJAG00000015468	RAB12	72	82.186	Callithrix_jacchus
ENSXCOG00000019310	rab12	93	82.018	ENSCAFG00020023721	RAB12	84	82.186	Canis_lupus_dingo
ENSXCOG00000019310	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.186	Capra_hircus
ENSXCOG00000019310	rab12	85	83.333	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSXCOG00000019310	rab12	100	78.543	ENSCCAG00000022862	RAB12	100	82.186	Cebus_capucinus
ENSXCOG00000019310	rab12	91	82.589	ENSCATG00000037784	RAB12	93	85.778	Cercocebus_atys
ENSXCOG00000019310	rab12	84	87.317	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSXCOG00000019310	rab12	93	80.870	ENSCPBG00000028375	RAB12	92	84.956	Chrysemys_picta_bellii
ENSXCOG00000019310	rab12	89	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSXCOG00000019310	rab12	93	83.333	ENSCGRG00001006958	Rab12	83	81.781	Cricetulus_griseus_chok1gshd
ENSXCOG00000019310	rab12	100	94.672	ENSCSEG00000016933	rab12	100	94.262	Cynoglossus_semilaevis
ENSXCOG00000019310	rab12	100	92.276	ENSCVAG00000003539	rab12	100	93.496	Cyprinodon_variegatus
ENSXCOG00000019310	rab12	100	84.836	ENSDARG00000089428	rab12	95	89.686	Danio_rerio
ENSXCOG00000019310	rab12	84	86.829	ENSDNOG00000046064	RAB12	52	85.333	Dasypus_novemcinctus
ENSXCOG00000019310	rab12	91	82.589	ENSDORG00000008920	Rab12	99	85.398	Dipodomys_ordii
ENSXCOG00000019310	rab12	77	65.079	ENSEBUG00000006581	rab12	92	64.062	Eptatretus_burgeri
ENSXCOG00000019310	rab12	93	82.018	ENSEASG00005002926	RAB12	83	81.377	Equus_asinus_asinus
ENSXCOG00000019310	rab12	93	82.018	ENSECAG00000007384	RAB12	71	81.377	Equus_caballus
ENSXCOG00000019310	rab12	100	88.934	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSXCOG00000019310	rab12	93	82.018	ENSFCAG00000027710	RAB12	72	82.186	Felis_catus
ENSXCOG00000019310	rab12	100	92.653	ENSFHEG00000004319	rab12	100	93.878	Fundulus_heteroclitus
ENSXCOG00000019310	rab12	86	89.524	ENSGMOG00000012335	rab12	87	89.048	Gadus_morhua
ENSXCOG00000019310	rab12	92	81.579	ENSGALG00000033608	RAB12	90	85.398	Gallus_gallus
ENSXCOG00000019310	rab12	90	89.954	ENSGACG00000016639	rab12	100	89.498	Gasterosteus_aculeatus
ENSXCOG00000019310	rab12	93	80.702	ENSGAGG00000007278	RAB12	92	84.956	Gopherus_agassizii
ENSXCOG00000019310	rab12	100	95.082	ENSHBUG00000008497	rab12	100	94.672	Haplochromis_burtoni
ENSXCOG00000019310	rab12	96	78.481	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSXCOG00000019310	rab12	100	89.796	ENSHCOG00000012376	rab12	100	88.115	Hippocampus_comes
ENSXCOG00000019310	rab12	100	86.066	ENSIPUG00000017401	rab12	100	86.066	Ictalurus_punctatus
ENSXCOG00000019310	rab12	93	79.565	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSXCOG00000019310	rab12	91	82.589	ENSJJAG00000019064	Rab12	99	85.778	Jaculus_jaculus
ENSXCOG00000019310	rab12	100	89.754	ENSKMAG00000020056	rab12	100	88.934	Kryptolebias_marmoratus
ENSXCOG00000019310	rab12	100	94.262	ENSLBEG00000013756	rab12	100	93.852	Labrus_bergylta
ENSXCOG00000019310	rab12	90	85.202	ENSLACG00000010461	RAB12	91	84.513	Latimeria_chalumnae
ENSXCOG00000019310	rab12	100	81.855	ENSLOCG00000002680	rab12	100	85.484	Lepisosteus_oculatus
ENSXCOG00000019310	rab12	100	77.642	ENSMFAG00000043551	RAB12	100	80.894	Macaca_fascicularis
ENSXCOG00000019310	rab12	84	87.317	ENSMNEG00000040853	RAB12	89	85.778	Macaca_nemestrina
ENSXCOG00000019310	rab12	100	93.852	ENSMAMG00000006862	rab12	100	93.443	Mastacembelus_armatus
ENSXCOG00000019310	rab12	100	95.082	ENSMZEG00005024316	rab12	100	94.672	Maylandia_zebra
ENSXCOG00000019310	rab12	83	82.843	ENSMGAG00000009197	RAB12	100	86.765	Meleagris_gallopavo
ENSXCOG00000019310	rab12	93	83.333	ENSMAUG00000008371	Rab12	83	81.781	Mesocricetus_auratus
ENSXCOG00000019310	rab12	91	82.143	ENSMICG00000030661	RAB12	94	85.333	Microcebus_murinus
ENSXCOG00000019310	rab12	89	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSXCOG00000019310	rab12	85	86.603	ENSMODG00000021452	RAB12	67	86.222	Monodelphis_domestica
ENSXCOG00000019310	rab12	100	91.803	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSXCOG00000019310	rab12	93	83.772	MGP_CAROLIEiJ_G0021839	Rab12	84	81.781	Mus_caroli
ENSXCOG00000019310	rab12	100	79.757	ENSMUSG00000023460	Rab12	100	81.781	Mus_musculus
ENSXCOG00000019310	rab12	100	79.757	MGP_PahariEiJ_G0020826	Rab12	100	81.781	Mus_pahari
ENSXCOG00000019310	rab12	93	83.772	MGP_SPRETEiJ_G0022750	Rab12	83	81.781	Mus_spretus
ENSXCOG00000019310	rab12	100	78.138	ENSMLUG00000002883	RAB12	100	81.377	Myotis_lucifugus
ENSXCOG00000019310	rab12	91	74.554	ENSNGAG00000019722	-	92	74.222	Nannospalax_galili
ENSXCOG00000019310	rab12	94	79.399	ENSNGAG00000024103	-	96	84.889	Nannospalax_galili
ENSXCOG00000019310	rab12	100	95.082	ENSNBRG00000014428	rab12	100	94.672	Neolamprologus_brichardi
ENSXCOG00000019310	rab12	100	78.138	ENSNLEG00000006939	RAB12	100	82.186	Nomascus_leucogenys
ENSXCOG00000019310	rab12	100	79.032	ENSMEUG00000000493	RAB12	91	86.222	Notamacropus_eugenii
ENSXCOG00000019310	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSXCOG00000019310	rab12	100	94.672	ENSONIG00000018469	rab12	100	94.262	Oreochromis_niloticus
ENSXCOG00000019310	rab12	100	93.033	ENSORLG00000003902	rab12	100	92.623	Oryzias_latipes
ENSXCOG00000019310	rab12	100	92.623	ENSORLG00020005131	rab12	100	92.213	Oryzias_latipes_hni
ENSXCOG00000019310	rab12	100	93.033	ENSORLG00015007869	rab12	100	92.623	Oryzias_latipes_hsok
ENSXCOG00000019310	rab12	100	93.852	ENSOMEG00000008191	rab12	100	93.443	Oryzias_melastigma
ENSXCOG00000019310	rab12	85	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSXCOG00000019310	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.116	Ovis_aries
ENSXCOG00000019310	rab12	84	82.609	ENSPPAG00000009152	RAB12	97	86.893	Pan_paniscus
ENSXCOG00000019310	rab12	100	78.138	ENSPPRG00000024521	RAB12	100	82.186	Panthera_pardus
ENSXCOG00000019310	rab12	100	78.138	ENSPTRG00000009853	RAB12	100	82.186	Pan_troglodytes
ENSXCOG00000019310	rab12	100	79.352	ENSPANG00000009320	RAB12	100	82.591	Papio_anubis
ENSXCOG00000019310	rab12	100	86.122	ENSPKIG00000008579	rab12	100	86.122	Paramormyrops_kingsleyae
ENSXCOG00000019310	rab12	100	89.754	ENSPMGG00000001890	rab12	100	89.754	Periophthalmus_magnuspinnatus
ENSXCOG00000019310	rab12	93	82.895	ENSPEMG00000021032	Rab12	84	81.377	Peromyscus_maniculatus_bairdii
ENSXCOG00000019310	rab12	88	85.714	ENSPCIG00000010453	RAB12	56	86.222	Phascolarctos_cinereus
ENSXCOG00000019310	rab12	100	97.541	ENSPFOG00000001579	rab12	100	97.541	Poecilia_formosa
ENSXCOG00000019310	rab12	100	97.541	ENSPLAG00000013594	rab12	100	97.541	Poecilia_latipinna
ENSXCOG00000019310	rab12	100	97.541	ENSPMEG00000010417	rab12	100	97.541	Poecilia_mexicana
ENSXCOG00000019310	rab12	100	97.951	ENSPREG00000017487	rab12	100	97.951	Poecilia_reticulata
ENSXCOG00000019310	rab12	93	82.018	ENSPPYG00000009015	-	72	82.186	Pongo_abelii
ENSXCOG00000019310	rab12	100	78.138	ENSPCAG00000015007	RAB12	100	81.781	Procavia_capensis
ENSXCOG00000019310	rab12	100	78.138	ENSPCOG00000019816	RAB12	100	82.186	Propithecus_coquereli
ENSXCOG00000019310	rab12	100	78.543	ENSPVAG00000002757	RAB12	100	82.591	Pteropus_vampyrus
ENSXCOG00000019310	rab12	100	95.082	ENSPNYG00000023905	rab12	100	94.672	Pundamilia_nyererei
ENSXCOG00000019310	rab12	100	95.082	ENSPNYG00000005654	rab12	100	94.672	Pundamilia_nyererei
ENSXCOG00000019310	rab12	100	86.179	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSXCOG00000019310	rab12	93	81.659	ENSRNOG00000019295	Rab12	100	79.200	Rattus_norvegicus
ENSXCOG00000019310	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	85.778	Rhinopithecus_bieti
ENSXCOG00000019310	rab12	91	82.589	ENSRROG00000019249	RAB12	94	85.778	Rhinopithecus_roxellana
ENSXCOG00000019310	rab12	94	77.922	ENSSBOG00000021125	RAB12	80	86.603	Saimiri_boliviensis_boliviensis
ENSXCOG00000019310	rab12	93	82.456	ENSSHAG00000001489	RAB12	91	86.829	Sarcophilus_harrisii
ENSXCOG00000019310	rab12	100	92.623	ENSSMAG00000012678	rab12	100	92.213	Scophthalmus_maximus
ENSXCOG00000019310	rab12	100	94.672	ENSSDUG00000008505	rab12	100	94.262	Seriola_dumerili
ENSXCOG00000019310	rab12	100	94.672	ENSSLDG00000022239	rab12	100	94.262	Seriola_lalandi_dorsalis
ENSXCOG00000019310	rab12	90	83.408	ENSSPUG00000003222	RAB12	92	86.283	Sphenodon_punctatus
ENSXCOG00000019310	rab12	100	94.672	ENSSPAG00000010822	rab12	100	94.262	Stegastes_partitus
ENSXCOG00000019310	rab12	93	82.456	ENSSSCG00000038026	RAB12	100	82.996	Sus_scrofa
ENSXCOG00000019310	rab12	93	80.519	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSXCOG00000019310	rab12	100	90.574	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSXCOG00000019310	rab12	100	91.803	ENSTNIG00000014859	rab12	100	90.984	Tetraodon_nigroviridis
ENSXCOG00000019310	rab12	89	82.648	ENSTTRG00000008711	RAB12	99	86.301	Tursiops_truncatus
ENSXCOG00000019310	rab12	100	78.138	ENSUAMG00000018092	RAB12	100	82.186	Ursus_americanus
ENSXCOG00000019310	rab12	90	81.900	ENSVVUG00000011748	RAB12	99	85.520	Vulpes_vulpes
ENSXCOG00000019310	rab12	93	81.659	ENSXETG00000004289	rab12	79	81.452	Xenopus_tropicalis
ENSXCOG00000019310	rab12	100	99.590	ENSXMAG00000023617	rab12	100	99.590	Xiphophorus_maculatus