EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019354 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 11058 bases
Position: chrKQ557221.1:23580264-23591321
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000025904	KH_1	PF00013.29	6.8e-67	1	4
ENSXCOP00000025904	KH_1	PF00013.29	6.8e-67	2	4
ENSXCOP00000025904	KH_1	PF00013.29	6.8e-67	3	4
ENSXCOP00000025904	KH_1	PF00013.29	6.8e-67	4	4
ENSXCOP00000025904	KH_2	PF07650.17	4.1e-21	1	1
ENSXCOP00000025904	DUF1897	PF09005.10	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026215	-	1812	-	ENSXCOP00000025904	603 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019354	fubp1	82	49.116	ENSXCOG00000011765	-	84	53.472
ENSXCOG00000019354	fubp1	98	47.769	ENSXCOG00000002806	FUBP3	95	46.382
ENSXCOG00000019354	fubp1	63	43.284	ENSXCOG00000013797	PCBP2	96	43.284
ENSXCOG00000019354	fubp1	97	53.689	ENSXCOG00000014443	khsrp	94	52.756
ENSXCOG00000019354	fubp1	59	37.313	ENSXCOG00000020481	pcbp3	60	37.313
ENSXCOG00000019354	fubp1	57	31.056	ENSXCOG00000000773	igf2bp3	62	31.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019354	fubp1	72	77.042	ENSG00000162613	FUBP1	100	68.664	Homo_sapiens
ENSXCOG00000019354	fubp1	99	84.177	ENSAPOG00000014845	fubp1	98	86.190	Acanthochromis_polyacanthus
ENSXCOG00000019354	fubp1	72	72.557	ENSAMEG00000007372	FUBP1	100	66.172	Ailuropoda_melanoleuca
ENSXCOG00000019354	fubp1	100	82.362	ENSACIG00000020024	fubp1	100	83.096	Amphilophus_citrinellus
ENSXCOG00000019354	fubp1	100	79.128	ENSAPEG00000012232	fubp1	100	83.968	Amphiprion_percula
ENSXCOG00000019354	fubp1	99	85.304	ENSATEG00000018619	fubp1	98	87.340	Anabas_testudineus
ENSXCOG00000019354	fubp1	67	78.935	ENSAPLG00000005965	FUBP1	100	70.315	Anas_platyrhynchos
ENSXCOG00000019354	fubp1	72	71.608	ENSACAG00000006310	FUBP1	96	61.370	Anolis_carolinensis
ENSXCOG00000019354	fubp1	99	83.070	ENSACLG00000006708	fubp1	100	84.505	Astatotilapia_calliptera
ENSXCOG00000019354	fubp1	85	82.331	ENSAMXG00000005525	fubp1	99	83.019	Astyanax_mexicanus
ENSXCOG00000019354	fubp1	72	77.263	ENSCJAG00000007062	FUBP1	100	69.040	Callithrix_jacchus
ENSXCOG00000019354	fubp1	72	76.856	ENSCAFG00000020361	FUBP1	100	68.817	Canis_familiaris
ENSXCOG00000019354	fubp1	67	78.502	ENSTSYG00000000148	FUBP1	100	68.903	Carlito_syrichta
ENSXCOG00000019354	fubp1	57	84.190	ENSCAPG00000011052	-	65	84.190	Cavia_aperea
ENSXCOG00000019354	fubp1	72	76.856	ENSCPOG00000002757	FUBP1	98	68.300	Cavia_porcellus
ENSXCOG00000019354	fubp1	72	62.717	ENSCCAG00000036537	FUBP1	100	63.295	Cebus_capucinus
ENSXCOG00000019354	fubp1	72	76.638	ENSCATG00000042126	FUBP1	100	68.664	Cercocebus_atys
ENSXCOG00000019354	fubp1	72	77.728	ENSCLAG00000005621	FUBP1	100	68.664	Chinchilla_lanigera
ENSXCOG00000019354	fubp1	72	76.638	ENSCSAG00000001402	FUBP1	100	68.664	Chlorocebus_sabaeus
ENSXCOG00000019354	fubp1	72	76.638	ENSCHOG00000008177	FUBP1	98	68.615	Choloepus_hoffmanni
ENSXCOG00000019354	fubp1	72	78.125	ENSCGRG00001007103	Fubp1	100	69.029	Cricetulus_griseus_chok1gshd
ENSXCOG00000019354	fubp1	67	78.230	ENSCGRG00000003372	Fubp1	100	68.730	Cricetulus_griseus_crigri
ENSXCOG00000019354	fubp1	100	82.786	ENSCSEG00000021412	fubp1	100	83.673	Cynoglossus_semilaevis
ENSXCOG00000019354	fubp1	99	85.474	ENSCVAG00000014487	fubp1	99	85.321	Cyprinodon_variegatus
ENSXCOG00000019354	fubp1	72	82.262	ENSDARG00000029248	fubp1	100	75.926	Danio_rerio
ENSXCOG00000019354	fubp1	85	56.410	ENSDNOG00000034565	-	87	58.095	Dasypus_novemcinctus
ENSXCOG00000019354	fubp1	72	77.483	ENSDORG00000016534	Fubp1	98	68.615	Dipodomys_ordii
ENSXCOG00000019354	fubp1	79	76.901	ENSETEG00000000948	-	53	77.193	Echinops_telfairi
ENSXCOG00000019354	fubp1	70	82.432	ENSEEUG00000001287	FUBP1	87	66.803	Erinaceus_europaeus
ENSXCOG00000019354	fubp1	100	77.019	ENSELUG00000007990	fubp1	100	77.795	Esox_lucius
ENSXCOG00000019354	fubp1	72	77.827	ENSFALG00000005768	FUBP1	97	70.047	Ficedula_albicollis
ENSXCOG00000019354	fubp1	72	76.638	ENSFDAG00000014210	FUBP1	98	68.462	Fukomys_damarensis
ENSXCOG00000019354	fubp1	100	86.128	ENSFHEG00000005230	fubp1	100	85.976	Fundulus_heteroclitus
ENSXCOG00000019354	fubp1	100	77.987	ENSGMOG00000003370	fubp1	100	78.549	Gadus_morhua
ENSXCOG00000019354	fubp1	72	78.319	ENSGALG00000008939	FUBP1	100	70.807	Gallus_gallus
ENSXCOG00000019354	fubp1	100	85.968	ENSGAFG00000020972	fubp1	100	86.460	Gambusia_affinis
ENSXCOG00000019354	fubp1	100	83.307	ENSGACG00000016563	fubp1	100	84.194	Gasterosteus_aculeatus
ENSXCOG00000019354	fubp1	100	81.832	ENSHBUG00000009835	fubp1	99	86.550	Haplochromis_burtoni
ENSXCOG00000019354	fubp1	72	76.856	ENSHGLG00000008415	-	100	68.349	Heterocephalus_glaber_female
ENSXCOG00000019354	fubp1	74	72.331	ENSHGLG00000002808	-	100	64.286	Heterocephalus_glaber_female
ENSXCOG00000019354	fubp1	72	76.856	ENSHGLG00100003417	-	100	68.349	Heterocephalus_glaber_male
ENSXCOG00000019354	fubp1	74	72.985	ENSHGLG00100001414	-	100	64.921	Heterocephalus_glaber_male
ENSXCOG00000019354	fubp1	100	78.648	ENSHCOG00000000910	fubp1	100	80.923	Hippocampus_comes
ENSXCOG00000019354	fubp1	100	76.526	ENSIPUG00000009896	fubp1	100	78.336	Ictalurus_punctatus
ENSXCOG00000019354	fubp1	72	77.951	ENSSTOG00000014312	FUBP1	100	68.817	Ictidomys_tridecemlineatus
ENSXCOG00000019354	fubp1	72	78.348	ENSJJAG00000020069	Fubp1	100	68.721	Jaculus_jaculus
ENSXCOG00000019354	fubp1	100	84.458	ENSKMAG00000018897	fubp1	100	85.354	Kryptolebias_marmoratus
ENSXCOG00000019354	fubp1	100	82.753	ENSLBEG00000012700	fubp1	97	81.833	Labrus_bergylta
ENSXCOG00000019354	fubp1	97	72.576	ENSLOCG00000003745	fubp1	99	71.324	Lepisosteus_oculatus
ENSXCOG00000019354	fubp1	72	73.996	ENSLAFG00000003273	FUBP1	99	70.939	Loxodonta_africana
ENSXCOG00000019354	fubp1	72	77.042	ENSMFAG00000031825	FUBP1	100	68.885	Macaca_fascicularis
ENSXCOG00000019354	fubp1	72	77.728	ENSMMUG00000002899	FUBP1	100	68.664	Macaca_mulatta
ENSXCOG00000019354	fubp1	72	76.638	ENSMNEG00000045212	FUBP1	100	68.664	Macaca_nemestrina
ENSXCOG00000019354	fubp1	99	79.789	ENSMAMG00000007489	fubp1	99	79.880	Mastacembelus_armatus
ENSXCOG00000019354	fubp1	100	84.724	ENSMZEG00005024298	fubp1	100	85.466	Maylandia_zebra
ENSXCOG00000019354	fubp1	67	78.986	ENSMGAG00000009424	FUBP1	100	70.627	Meleagris_gallopavo
ENSXCOG00000019354	fubp1	72	76.856	ENSMAUG00000016428	Fubp1	98	68.606	Mesocricetus_auratus
ENSXCOG00000019354	fubp1	72	77.951	ENSMOCG00000014751	Fubp1	100	69.470	Microtus_ochrogaster
ENSXCOG00000019354	fubp1	87	84.657	ENSMMOG00000019463	fubp1	100	85.507	Mola_mola
ENSXCOG00000019354	fubp1	70	71.493	ENSMODG00000020804	FUBP1	100	64.455	Monodelphis_domestica
ENSXCOG00000019354	fubp1	100	82.704	ENSMALG00000015173	fubp1	100	83.281	Monopterus_albus
ENSXCOG00000019354	fubp1	72	77.951	MGP_CAROLIEiJ_G0025740	Fubp1	99	70.992	Mus_caroli
ENSXCOG00000019354	fubp1	72	77.728	ENSMUSG00000028034	Fubp1	99	70.802	Mus_musculus
ENSXCOG00000019354	fubp1	72	77.778	MGP_PahariEiJ_G0027191	Fubp1	99	70.857	Mus_pahari
ENSXCOG00000019354	fubp1	72	77.951	MGP_SPRETEiJ_G0026693	Fubp1	99	70.992	Mus_spretus
ENSXCOG00000019354	fubp1	72	72.407	ENSMLUG00000014802	FUBP1	100	66.766	Myotis_lucifugus
ENSXCOG00000019354	fubp1	72	74.172	ENSNGAG00000014302	Fubp1	100	66.564	Nannospalax_galili
ENSXCOG00000019354	fubp1	100	79.154	ENSNBRG00000015099	fubp1	100	84.665	Neolamprologus_brichardi
ENSXCOG00000019354	fubp1	72	73.465	ENSNLEG00000009772	FUBP1	100	66.564	Nomascus_leucogenys
ENSXCOG00000019354	fubp1	71	61.778	ENSOPRG00000001175	FUBP1	98	57.032	Ochotona_princeps
ENSXCOG00000019354	fubp1	72	76.856	ENSODEG00000002600	-	98	68.615	Octodon_degus
ENSXCOG00000019354	fubp1	99	50.637	ENSODEG00000003657	-	99	49.681	Octodon_degus
ENSXCOG00000019354	fubp1	99	82.575	ENSONIG00000018381	fubp1	99	83.805	Oreochromis_niloticus
ENSXCOG00000019354	fubp1	58	84.703	ENSOANG00000009777	FUBP1	98	66.435	Ornithorhynchus_anatinus
ENSXCOG00000019354	fubp1	99	78.964	ENSORLG00000003540	fubp1	99	83.146	Oryzias_latipes
ENSXCOG00000019354	fubp1	100	81.942	ENSORLG00020005908	fubp1	99	82.986	Oryzias_latipes_hni
ENSXCOG00000019354	fubp1	99	84.430	ENSORLG00015008779	fubp1	99	84.912	Oryzias_latipes_hsok
ENSXCOG00000019354	fubp1	100	84.848	ENSOMEG00000021943	fubp1	100	85.167	Oryzias_melastigma
ENSXCOG00000019354	fubp1	72	72.257	ENSOGAG00000014233	FUBP1	100	65.782	Otolemur_garnettii
ENSXCOG00000019354	fubp1	72	77.263	ENSOARG00000013259	FUBP1	100	66.717	Ovis_aries
ENSXCOG00000019354	fubp1	72	76.856	ENSPPRG00000000413	FUBP1	100	68.817	Panthera_pardus
ENSXCOG00000019354	fubp1	72	76.856	ENSPTIG00000019450	FUBP1	100	68.817	Panthera_tigris_altaica
ENSXCOG00000019354	fubp1	68	77.857	ENSPSIG00000012965	FUBP1	100	69.722	Pelodiscus_sinensis
ENSXCOG00000019354	fubp1	99	81.571	ENSPMGG00000009060	fubp1	99	80.096	Periophthalmus_magnuspinnatus
ENSXCOG00000019354	fubp1	72	77.925	ENSPEMG00000021802	Fubp1	98	69.136	Peromyscus_maniculatus_bairdii
ENSXCOG00000019354	fubp1	65	56.769	ENSPMAG00000001644	-	93	56.769	Petromyzon_marinus
ENSXCOG00000019354	fubp1	100	86.890	ENSPFOG00000000238	fubp1	100	86.738	Poecilia_formosa
ENSXCOG00000019354	fubp1	100	81.747	ENSPLAG00000021170	fubp1	100	86.603	Poecilia_latipinna
ENSXCOG00000019354	fubp1	99	90.256	ENSPMEG00000004747	fubp1	99	92.308	Poecilia_mexicana
ENSXCOG00000019354	fubp1	99	87.836	ENSPREG00000017911	fubp1	99	91.932	Poecilia_reticulata
ENSXCOG00000019354	fubp1	74	76.509	ENSPPYG00000001219	-	68	77.483	Pongo_abelii
ENSXCOG00000019354	fubp1	72	76.805	ENSPCAG00000012617	FUBP1	98	68.567	Procavia_capensis
ENSXCOG00000019354	fubp1	72	77.704	ENSPCOG00000024974	FUBP1	100	68.817	Propithecus_coquereli
ENSXCOG00000019354	fubp1	72	70.742	ENSPVAG00000014637	FUBP1	98	64.462	Pteropus_vampyrus
ENSXCOG00000019354	fubp1	100	83.123	ENSPNYG00000004552	fubp1	100	84.360	Pundamilia_nyererei
ENSXCOG00000019354	fubp1	100	77.761	ENSPNAG00000016207	fubp1	98	84.024	Pygocentrus_nattereri
ENSXCOG00000019354	fubp1	72	77.951	ENSRNOG00000043370	Fubp1	100	69.147	Rattus_norvegicus
ENSXCOG00000019354	fubp1	72	76.638	ENSRBIG00000042950	FUBP1	100	68.664	Rhinopithecus_bieti
ENSXCOG00000019354	fubp1	72	76.638	ENSRROG00000043534	FUBP1	100	68.664	Rhinopithecus_roxellana
ENSXCOG00000019354	fubp1	72	76.856	ENSSBOG00000027299	FUBP1	98	71.670	Saimiri_boliviensis_boliviensis
ENSXCOG00000019354	fubp1	67	77.033	ENSSHAG00000005367	FUBP1	99	71.612	Sarcophilus_harrisii
ENSXCOG00000019354	fubp1	99	76.312	ENSSFOG00015010213	fubp1	98	77.424	Scleropages_formosus
ENSXCOG00000019354	fubp1	100	77.386	ENSSMAG00000012029	fubp1	98	76.523	Scophthalmus_maximus
ENSXCOG00000019354	fubp1	99	81.677	ENSSDUG00000007383	fubp1	100	81.043	Seriola_dumerili
ENSXCOG00000019354	fubp1	100	81.734	ENSSLDG00000022863	fubp1	100	83.413	Seriola_lalandi_dorsalis
ENSXCOG00000019354	fubp1	83	70.513	ENSSARG00000011730	FUBP1	69	70.567	Sorex_araneus
ENSXCOG00000019354	fubp1	99	63.158	ENSSPUG00000008389	FUBP1	100	61.786	Sphenodon_punctatus
ENSXCOG00000019354	fubp1	99	84.945	ENSSPAG00000010161	fubp1	99	85.851	Stegastes_partitus
ENSXCOG00000019354	fubp1	67	78.043	ENSTGUG00000006841	FUBP1	100	69.787	Taeniopygia_guttata
ENSXCOG00000019354	fubp1	100	74.231	ENSTRUG00000004615	fubp1	100	75.477	Takifugu_rubripes
ENSXCOG00000019354	fubp1	50	93.289	ENSTNIG00000019815	-	88	93.289	Tetraodon_nigroviridis
ENSXCOG00000019354	fubp1	79	83.234	ENSTBEG00000017333	FUBP1	62	83.832	Tupaia_belangeri
ENSXCOG00000019354	fubp1	72	76.856	ENSTTRG00000000096	FUBP1	98	68.615	Tursiops_truncatus
ENSXCOG00000019354	fubp1	72	76.856	ENSVPAG00000004709	FUBP1	99	68.615	Vicugna_pacos
ENSXCOG00000019354	fubp1	91	93.702	ENSXMAG00000007168	fubp1	99	93.702	Xiphophorus_maculatus