EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019434 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5204 bases
Position: chrKQ557221.1:24228691-24233894
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026006	RRM_1	PF00076.22	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026319	-	705	-	ENSXCOP00000026006	234 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019434	-	78	55.191	ENSG00000184672	RALYL	93	75.949	Homo_sapiens
ENSXCOG00000019434	-	94	75.785	ENSAPOG00000006963	hnrnpc	50	89.571	Acanthochromis_polyacanthus
ENSXCOG00000019434	-	100	67.883	ENSACIG00000016568	-	58	89.571	Amphilophus_citrinellus
ENSXCOG00000019434	-	71	86.905	ENSACIG00000000270	-	60	87.273	Amphilophus_citrinellus
ENSXCOG00000019434	-	69	88.957	ENSAOCG00000021616	-	52	90.184	Amphiprion_ocellaris
ENSXCOG00000019434	-	94	75.785	ENSAOCG00000003896	-	50	89.571	Amphiprion_ocellaris
ENSXCOG00000019434	-	69	89.571	ENSAPEG00000019962	-	53	90.798	Amphiprion_percula
ENSXCOG00000019434	-	94	75.785	ENSAPEG00000001489	-	50	89.571	Amphiprion_percula
ENSXCOG00000019434	-	95	76.000	ENSATEG00000011734	-	52	88.415	Anabas_testudineus
ENSXCOG00000019434	-	69	89.571	ENSATEG00000018006	-	57	90.798	Anabas_testudineus
ENSXCOG00000019434	-	73	57.803	ENSAPLG00000015574	RALYL	54	61.728	Anas_platyrhynchos
ENSXCOG00000019434	-	73	57.803	ENSACAG00000028464	RALYL	54	62.346	Anolis_carolinensis
ENSXCOG00000019434	-	78	55.191	ENSANAG00000023383	RALYL	53	60.625	Aotus_nancymaae
ENSXCOG00000019434	-	69	87.037	ENSACLG00000013636	-	52	87.730	Astatotilapia_calliptera
ENSXCOG00000019434	-	69	88.344	ENSACLG00000005707	-	53	90.184	Astatotilapia_calliptera
ENSXCOG00000019434	-	71	87.425	ENSACLG00000000995	-	57	87.730	Astatotilapia_calliptera
ENSXCOG00000019434	-	95	68.996	ENSAMXG00000034915	zgc:55733	56	86.503	Astyanax_mexicanus
ENSXCOG00000019434	-	58	79.562	ENSAMXG00000042946	hnrnpc	96	61.538	Astyanax_mexicanus
ENSXCOG00000019434	-	73	57.310	ENSCJAG00000000402	RALYL	53	60.625	Callithrix_jacchus
ENSXCOG00000019434	-	73	57.225	ENSCPOG00000012314	RALYL	54	61.111	Cavia_porcellus
ENSXCOG00000019434	-	78	55.191	ENSCCAG00000025003	RALYL	77	75.949	Cebus_capucinus
ENSXCOG00000019434	-	78	55.191	ENSCATG00000042145	RALYL	53	60.625	Cercocebus_atys
ENSXCOG00000019434	-	73	57.225	ENSCLAG00000005228	RALYL	54	61.111	Chinchilla_lanigera
ENSXCOG00000019434	-	73	55.491	ENSCHOG00000013228	RALYL	54	56.522	Choloepus_hoffmanni
ENSXCOG00000019434	-	78	55.191	ENSCANG00000039144	RALYL	53	60.625	Colobus_angolensis_palliatus
ENSXCOG00000019434	-	98	43.478	ENSCGRG00001009241	Ralyl	54	61.111	Cricetulus_griseus_chok1gshd
ENSXCOG00000019434	-	69	90.184	ENSCSEG00000021349	-	50	91.411	Cynoglossus_semilaevis
ENSXCOG00000019434	-	69	80.120	ENSCSEG00000019769	-	54	80.723	Cynoglossus_semilaevis
ENSXCOG00000019434	-	86	64.734	ENSCVAG00000002797	-	51	71.341	Cyprinodon_variegatus
ENSXCOG00000019434	-	93	74.886	ENSDARG00000103845	zgc:55733	59	86.420	Danio_rerio
ENSXCOG00000019434	-	73	57.803	ENSDORG00000003721	Ralyl	54	61.728	Dipodomys_ordii
ENSXCOG00000019434	-	73	56.647	ENSETEG00000014028	RALYL	82	60.494	Echinops_telfairi
ENSXCOG00000019434	-	75	46.995	ENSEBUG00000006049	RALYL	52	50.314	Eptatretus_burgeri
ENSXCOG00000019434	-	73	57.225	ENSEEUG00000007202	RALYL	55	61.111	Erinaceus_europaeus
ENSXCOG00000019434	-	80	77.228	ENSELUG00000007714	-	54	86.957	Esox_lucius
ENSXCOG00000019434	-	72	83.626	ENSELUG00000004132	-	54	85.366	Esox_lucius
ENSXCOG00000019434	-	89	52.632	ENSFALG00000008647	RALYL	68	61.250	Ficedula_albicollis
ENSXCOG00000019434	-	93	69.820	ENSFHEG00000003605	-	51	82.927	Fundulus_heteroclitus
ENSXCOG00000019434	-	93	77.021	ENSFHEG00000007278	-	52	85.311	Fundulus_heteroclitus
ENSXCOG00000019434	-	73	57.895	ENSGALG00000036938	RALYL	54	61.728	Gallus_gallus
ENSXCOG00000019434	-	100	69.580	ENSGAFG00000020992	-	72	93.827	Gambusia_affinis
ENSXCOG00000019434	-	93	70.588	ENSGAFG00000020486	-	58	82.927	Gambusia_affinis
ENSXCOG00000019434	-	92	76.018	ENSGACG00000017772	-	60	86.503	Gasterosteus_aculeatus
ENSXCOG00000019434	-	98	60.669	ENSGACG00000018932	-	61	70.414	Gasterosteus_aculeatus
ENSXCOG00000019434	-	78	55.191	ENSGGOG00000000841	RALYL	53	60.625	Gorilla_gorilla
ENSXCOG00000019434	-	69	88.344	ENSHBUG00000010527	-	51	83.908	Haplochromis_burtoni
ENSXCOG00000019434	-	71	87.952	ENSHBUG00000018342	-	50	88.344	Haplochromis_burtoni
ENSXCOG00000019434	-	73	56.647	ENSHGLG00000004866	RALYL	54	60.494	Heterocephalus_glaber_female
ENSXCOG00000019434	-	73	56.647	ENSHGLG00100017480	RALYL	54	60.494	Heterocephalus_glaber_male
ENSXCOG00000019434	-	68	89.375	ENSHCOG00000012333	hnrnpc	51	90.184	Hippocampus_comes
ENSXCOG00000019434	-	68	85.276	ENSIPUG00000011271	hnrnpc	71	85.276	Ictalurus_punctatus
ENSXCOG00000019434	-	98	71.915	ENSIPUG00000008666	zgc:55733	67	85.000	Ictalurus_punctatus
ENSXCOG00000019434	-	98	43.478	ENSSTOG00000012583	RALYL	55	61.111	Ictidomys_tridecemlineatus
ENSXCOG00000019434	-	71	87.349	ENSKMAG00000011170	-	50	87.730	Kryptolebias_marmoratus
ENSXCOG00000019434	-	78	77.720	ENSLBEG00000024418	-	54	77.457	Labrus_bergylta
ENSXCOG00000019434	-	76	82.778	ENSLBEG00000006979	-	52	83.125	Labrus_bergylta
ENSXCOG00000019434	-	69	76.220	ENSLOCG00000002560	hnrnpc	56	76.220	Lepisosteus_oculatus
ENSXCOG00000019434	-	78	55.191	ENSMNEG00000033288	RALYL	53	60.625	Macaca_nemestrina
ENSXCOG00000019434	-	78	55.191	ENSMLEG00000038284	RALYL	53	60.625	Mandrillus_leucophaeus
ENSXCOG00000019434	-	69	88.957	ENSMAMG00000008033	-	54	90.184	Mastacembelus_armatus
ENSXCOG00000019434	-	94	75.336	ENSMAMG00000012236	-	54	88.957	Mastacembelus_armatus
ENSXCOG00000019434	-	71	87.425	ENSMZEG00005020460	-	54	87.730	Maylandia_zebra
ENSXCOG00000019434	-	98	43.478	ENSMAUG00000015149	Ralyl	54	61.111	Mesocricetus_auratus
ENSXCOG00000019434	-	73	57.310	ENSMICG00000005558	RALYL	80	75.949	Microcebus_murinus
ENSXCOG00000019434	-	73	57.225	ENSMOCG00000017371	Ralyl	54	61.111	Microtus_ochrogaster
ENSXCOG00000019434	-	71	88.554	ENSMMOG00000021465	-	54	88.957	Mola_mola
ENSXCOG00000019434	-	99	66.541	ENSMMOG00000019520	-	59	90.062	Mola_mola
ENSXCOG00000019434	-	93	66.667	ENSMALG00000007520	-	53	78.528	Monopterus_albus
ENSXCOG00000019434	-	98	43.478	ENSMUSG00000039717	Ralyl	93	74.684	Mus_musculus
ENSXCOG00000019434	-	98	44.882	ENSMPUG00000010724	RALYL	54	60.494	Mustela_putorius_furo
ENSXCOG00000019434	-	73	57.225	ENSNGAG00000013375	Ralyl	54	61.111	Nannospalax_galili
ENSXCOG00000019434	-	69	88.344	ENSNBRG00000015676	-	54	90.062	Neolamprologus_brichardi
ENSXCOG00000019434	-	93	73.451	ENSNBRG00000004912	-	70	88.485	Neolamprologus_brichardi
ENSXCOG00000019434	-	78	55.191	ENSNLEG00000002702	RALYL	50	60.625	Nomascus_leucogenys
ENSXCOG00000019434	-	59	52.482	ENSOPRG00000013650	-	66	52.713	Ochotona_princeps
ENSXCOG00000019434	-	98	43.651	ENSODEG00000001012	RALYL	54	61.111	Octodon_degus
ENSXCOG00000019434	-	69	87.654	ENSONIG00000007859	-	55	86.826	Oreochromis_niloticus
ENSXCOG00000019434	-	91	65.899	ENSORLG00000009999	-	51	78.788	Oryzias_latipes
ENSXCOG00000019434	-	91	65.438	ENSORLG00020018228	hnrnpc	51	78.182	Oryzias_latipes_hni
ENSXCOG00000019434	-	91	65.899	ENSORLG00015019755	-	51	78.788	Oryzias_latipes_hsok
ENSXCOG00000019434	-	91	67.281	ENSOMEG00000020488	-	51	80.000	Oryzias_melastigma
ENSXCOG00000019434	-	78	55.191	ENSPPAG00000038705	RALYL	53	61.111	Pan_paniscus
ENSXCOG00000019434	-	98	45.276	ENSPPRG00000018612	RALYL	52	61.111	Panthera_pardus
ENSXCOG00000019434	-	98	45.276	ENSPTIG00000020331	RALYL	52	61.111	Panthera_tigris_altaica
ENSXCOG00000019434	-	78	55.191	ENSPTRG00000020381	RALYL	53	60.625	Pan_troglodytes
ENSXCOG00000019434	-	78	55.191	ENSPANG00000029305	RALYL	53	60.625	Papio_anubis
ENSXCOG00000019434	-	99	42.969	ENSPSIG00000011135	RALYL	54	61.728	Pelodiscus_sinensis
ENSXCOG00000019434	-	99	66.914	ENSPMGG00000013144	-	59	90.184	Periophthalmus_magnuspinnatus
ENSXCOG00000019434	-	85	72.500	ENSPMGG00000017774	-	67	69.697	Periophthalmus_magnuspinnatus
ENSXCOG00000019434	-	98	43.478	ENSPEMG00000016447	Ralyl	54	61.111	Peromyscus_maniculatus_bairdii
ENSXCOG00000019434	-	72	57.143	ENSPMAG00000002407	RALYL	70	59.509	Petromyzon_marinus
ENSXCOG00000019434	-	71	82.840	ENSPFOG00000001583	-	51	84.756	Poecilia_formosa
ENSXCOG00000019434	-	68	93.671	ENSPFOG00000002643	-	50	91.566	Poecilia_formosa
ENSXCOG00000019434	-	71	82.249	ENSPLAG00000015305	-	51	84.146	Poecilia_latipinna
ENSXCOG00000019434	-	76	83.425	ENSPMEG00000004802	-	51	85.366	Poecilia_mexicana
ENSXCOG00000019434	-	91	70.968	ENSPREG00000007928	-	51	83.537	Poecilia_reticulata
ENSXCOG00000019434	-	68	93.671	ENSPREG00000001852	-	52	93.827	Poecilia_reticulata
ENSXCOG00000019434	-	73	56.069	ENSPVAG00000010821	RALYL	54	59.877	Pteropus_vampyrus
ENSXCOG00000019434	-	96	73.246	ENSPNYG00000020293	-	66	88.485	Pundamilia_nyererei
ENSXCOG00000019434	-	69	88.344	ENSPNYG00000003747	-	53	90.184	Pundamilia_nyererei
ENSXCOG00000019434	-	95	64.854	ENSPNAG00000019200	zgc:55733	51	84.049	Pygocentrus_nattereri
ENSXCOG00000019434	-	69	86.503	ENSPNAG00000015686	hnrnpc	53	86.503	Pygocentrus_nattereri
ENSXCOG00000019434	-	78	55.191	ENSRROG00000023925	RALYL	80	75.949	Rhinopithecus_roxellana
ENSXCOG00000019434	-	71	88.024	ENSSFOG00015012924	-	82	95.062	Scleropages_formosus
ENSXCOG00000019434	-	71	81.437	ENSSFOG00015012015	-	59	82.716	Scleropages_formosus
ENSXCOG00000019434	-	66	89.103	ENSSMAG00000011147	-	56	90.683	Scophthalmus_maximus
ENSXCOG00000019434	-	69	86.420	ENSSMAG00000013592	-	50	87.730	Scophthalmus_maximus
ENSXCOG00000019434	-	93	77.626	ENSSDUG00000006730	-	50	91.411	Seriola_dumerili
ENSXCOG00000019434	-	79	81.915	ENSSDUG00000001723	-	53	88.957	Seriola_dumerili
ENSXCOG00000019434	-	93	77.626	ENSSLDG00000007474	-	54	91.411	Seriola_lalandi_dorsalis
ENSXCOG00000019434	-	71	88.554	ENSSLDG00000007454	-	51	89.571	Seriola_lalandi_dorsalis
ENSXCOG00000019434	-	69	89.506	ENSSPAG00000023204	-	50	90.184	Stegastes_partitus
ENSXCOG00000019434	-	73	57.803	ENSTGUG00000011689	RALYL	55	61.728	Taeniopygia_guttata
ENSXCOG00000019434	-	98	70.690	ENSTRUG00000020158	-	51	84.663	Takifugu_rubripes
ENSXCOG00000019434	-	65	88.889	ENSTNIG00000000334	-	61	84.242	Tetraodon_nigroviridis
ENSXCOG00000019434	-	78	85.792	ENSTNIG00000007427	-	50	85.276	Tetraodon_nigroviridis
ENSXCOG00000019434	-	73	48.555	ENSTBEG00000005551	RALYL	63	51.852	Tupaia_belangeri
ENSXCOG00000019434	-	73	53.529	ENSTTRG00000015762	RALYL	53	57.764	Tursiops_truncatus
ENSXCOG00000019434	-	98	40.079	ENSVPAG00000008501	RALYL	52	55.901	Vicugna_pacos
ENSXCOG00000019434	-	68	94.304	ENSXMAG00000022849	-	50	94.444	Xiphophorus_maculatus
ENSXCOG00000019434	-	85	74.752	ENSXMAG00000009333	-	51	83.537	Xiphophorus_maculatus