EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019442 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5858 bases
Position: chrKQ557218.1:12027472-12033329
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026017	AKAP7_NLS	PF10469.9	1.4e-18	1	1
ENSXCOP00000026019	AKAP7_NLS	PF10469.9	1.4e-18	1	1
ENSXCOP00000026016	AKAP7_NLS	PF10469.9	1.7e-18	1	1
ENSXCOP00000026014	AKAP7_NLS	PF10469.9	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026329	-	1164	-	ENSXCOP00000026016	387 (aa)	-	-
ENSXCOT00000026332	-	1125	-	ENSXCOP00000026019	374 (aa)	-	-
ENSXCOT00000026330	-	1062	-	ENSXCOP00000026017	353 (aa)	-	-
ENSXCOT00000026327	-	1287	-	ENSXCOP00000026014	428 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019442	-	96	80.147	ENSAPOG00000016038	-	98	61.959	Acanthochromis_polyacanthus
ENSXCOG00000019442	-	100	69.639	ENSACIG00000006238	-	100	70.546	Amphilophus_citrinellus
ENSXCOG00000019442	-	100	72.500	ENSAOCG00000012343	-	81	72.500	Amphiprion_ocellaris
ENSXCOG00000019442	-	98	72.500	ENSAPEG00000008438	-	79	72.500	Amphiprion_percula
ENSXCOG00000019442	-	97	78.774	ENSATEG00000022575	-	85	78.774	Anabas_testudineus
ENSXCOG00000019442	-	86	45.833	ENSACAG00000016906	LENG9	87	32.464	Anolis_carolinensis
ENSXCOG00000019442	-	100	78.922	ENSACLG00000021615	-	79	78.922	Astatotilapia_calliptera
ENSXCOG00000019442	-	97	52.071	ENSAMXG00000041663	-	88	42.981	Astyanax_mexicanus
ENSXCOG00000019442	-	99	32.737	ENSCPBG00000016763	LENG9	88	34.456	Chrysemys_picta_bellii
ENSXCOG00000019442	-	92	30.398	ENSCING00000013747	-	100	31.054	Ciona_intestinalis
ENSXCOG00000019442	-	91	77.041	ENSCSEG00000018718	-	99	62.175	Cynoglossus_semilaevis
ENSXCOG00000019442	-	100	78.082	ENSCVAG00000007812	-	85	75.214	Cyprinodon_variegatus
ENSXCOG00000019442	-	99	47.959	ENSDARG00000062374	leng9	94	47.959	Danio_rerio
ENSXCOG00000019442	-	97	66.990	ENSELUG00000015268	-	71	66.990	Esox_lucius
ENSXCOG00000019442	-	100	65.746	ENSGMOG00000004924	leng9	99	65.746	Gadus_morhua
ENSXCOG00000019442	-	100	93.897	ENSGAFG00000013280	-	82	90.308	Gambusia_affinis
ENSXCOG00000019442	-	100	72.330	ENSGACG00000010726	-	86	70.892	Gasterosteus_aculeatus
ENSXCOG00000019442	-	99	33.247	ENSGAGG00000018912	LENG9	86	33.943	Gopherus_agassizii
ENSXCOG00000019442	-	99	78.922	ENSHBUG00000013531	-	79	78.922	Haplochromis_burtoni
ENSXCOG00000019442	-	100	64.419	ENSHCOG00000020683	-	98	63.537	Hippocampus_comes
ENSXCOG00000019442	-	98	53.723	ENSIPUG00000008163	leng9	91	42.797	Ictalurus_punctatus
ENSXCOG00000019442	-	99	82.488	ENSKMAG00000005354	-	93	73.790	Kryptolebias_marmoratus
ENSXCOG00000019442	-	98	76.471	ENSLBEG00000016902	-	81	73.853	Labrus_bergylta
ENSXCOG00000019442	-	99	30.198	ENSLACG00000012924	LENG9	88	31.204	Latimeria_chalumnae
ENSXCOG00000019442	-	98	80.392	ENSMAMG00000019552	-	75	80.392	Mastacembelus_armatus
ENSXCOG00000019442	-	100	78.922	ENSMZEG00005016430	-	79	78.922	Maylandia_zebra
ENSXCOG00000019442	-	99	76.961	ENSMMOG00000016554	-	89	76.961	Mola_mola
ENSXCOG00000019442	-	95	37.076	ENSMODG00000023541	-	95	36.247	Monodelphis_domestica
ENSXCOG00000019442	-	99	76.887	ENSNBRG00000003056	-	98	76.887	Neolamprologus_brichardi
ENSXCOG00000019442	-	96	79.310	ENSONIG00000012767	-	100	69.133	Oreochromis_niloticus
ENSXCOG00000019442	-	100	34.015	ENSOANG00000005166	-	95	36.313	Ornithorhynchus_anatinus
ENSXCOG00000019442	-	100	75.714	ENSORLG00000011328	-	73	75.714	Oryzias_latipes
ENSXCOG00000019442	-	100	76.190	ENSORLG00020007474	-	73	76.190	Oryzias_latipes_hni
ENSXCOG00000019442	-	100	75.238	ENSORLG00015013245	-	74	75.238	Oryzias_latipes_hsok
ENSXCOG00000019442	-	99	75.472	ENSOMEG00000010765	-	76	75.472	Oryzias_melastigma
ENSXCOG00000019442	-	92	48.780	ENSPKIG00000012289	-	61	51.095	Paramormyrops_kingsleyae
ENSXCOG00000019442	-	86	90.426	ENSPMGG00000012138	-	78	90.426	Periophthalmus_magnuspinnatus
ENSXCOG00000019442	-	99	32.487	ENSPCIG00000009911	-	95	33.333	Phascolarctos_cinereus
ENSXCOG00000019442	-	100	91.981	ENSPFOG00000009984	-	79	92.823	Poecilia_formosa
ENSXCOG00000019442	-	100	91.038	ENSPLAG00000012683	-	79	91.388	Poecilia_latipinna
ENSXCOG00000019442	-	100	91.981	ENSPMEG00000017453	-	79	92.823	Poecilia_mexicana
ENSXCOG00000019442	-	99	94.175	ENSPREG00000008082	-	81	94.175	Poecilia_reticulata
ENSXCOG00000019442	-	100	77.941	ENSPNYG00000001936	-	79	77.941	Pundamilia_nyererei
ENSXCOG00000019442	-	98	51.397	ENSPNAG00000003520	-	94	43.750	Pygocentrus_nattereri
ENSXCOG00000019442	-	93	47.980	ENSSFOG00015000816	-	66	47.980	Scleropages_formosus
ENSXCOG00000019442	-	99	76.471	ENSSMAG00000012988	-	78	76.471	Scophthalmus_maximus
ENSXCOG00000019442	-	86	81.208	ENSSDUG00000008877	-	73	81.208	Seriola_dumerili
ENSXCOG00000019442	-	89	76.506	ENSSLDG00000022376	-	72	76.506	Seriola_lalandi_dorsalis
ENSXCOG00000019442	-	79	52.273	ENSSPUG00000002762	LENG9	58	49.505	Sphenodon_punctatus
ENSXCOG00000019442	-	95	77.500	ENSSPAG00000016516	-	98	60.805	Stegastes_partitus
ENSXCOG00000019442	-	91	73.427	ENSTRUG00000016004	-	99	54.505	Takifugu_rubripes
ENSXCOG00000019442	-	97	77.778	ENSTNIG00000008093	-	99	66.917	Tetraodon_nigroviridis
ENSXCOG00000019442	-	96	44.231	ENSTTRG00000006593	LENG9	73	43.949	Tursiops_truncatus
ENSXCOG00000019442	-	99	31.579	ENSXETG00000027476	leng9	90	32.419	Xenopus_tropicalis
ENSXCOG00000019442	-	100	98.585	ENSXMAG00000023792	-	83	93.833	Xiphophorus_maculatus