EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019492 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8551 bases
Position: chrKQ557205.1:7305671-7314221
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	1	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	2	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	3	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	4	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	5	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	6	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	7	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	8	9
ENSXCOP00000026105	zf-C2H2	PF00096.26	9.4e-46	9	9
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	1	6
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	2	6
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	3	6
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	4	6
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	5	6
ENSXCOP00000026099	zf-C2H2	PF00096.26	3.1e-31	6	6
ENSXCOP00000026102	zf-C2H2	PF00096.26	2.2e-19	1	3
ENSXCOP00000026102	zf-C2H2	PF00096.26	2.2e-19	2	3
ENSXCOP00000026102	zf-C2H2	PF00096.26	2.2e-19	3	3
ENSXCOP00000026105	zf-met	PF12874.7	3.2e-12	1	1
ENSXCOP00000026099	zf-met	PF12874.7	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026413	-	654	-	ENSXCOP00000026099	217 (aa)	-	-
ENSXCOT00000026419	-	885	-	ENSXCOP00000026105	294 (aa)	-	-
ENSXCOT00000026416	-	462	-	ENSXCOP00000026102	153 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019492	-	91	52.308	ENSXCOG00000007941	-	94	52.308
ENSXCOG00000019492	-	100	42.259	ENSXCOG00000019481	-	93	48.165
ENSXCOG00000019492	-	100	47.059	ENSXCOG00000002473	-	89	53.571
ENSXCOG00000019492	-	94	42.742	ENSXCOG00000020768	-	71	42.336
ENSXCOG00000019492	-	88	41.667	ENSXCOG00000020769	-	94	41.667
ENSXCOG00000019492	-	99	54.144	ENSXCOG00000002898	-	85	55.466
ENSXCOG00000019492	-	98	37.037	ENSXCOG00000003438	-	95	38.824
ENSXCOG00000019492	-	88	59.649	ENSXCOG00000007420	-	95	66.667
ENSXCOG00000019492	-	99	51.786	ENSXCOG00000012921	-	96	51.786
ENSXCOG00000019492	-	94	47.619	ENSXCOG00000012924	-	92	53.333
ENSXCOG00000019492	-	94	45.249	ENSXCOG00000014361	-	66	45.249
ENSXCOG00000019492	-	94	53.846	ENSXCOG00000015947	-	98	51.163
ENSXCOG00000019492	-	94	53.061	ENSXCOG00000003493	-	62	53.061
ENSXCOG00000019492	-	94	49.505	ENSXCOG00000003499	-	86	49.505
ENSXCOG00000019492	-	99	37.903	ENSXCOG00000008056	-	64	36.937
ENSXCOG00000019492	-	96	53.333	ENSXCOG00000011725	-	99	51.724
ENSXCOG00000019492	-	95	53.158	ENSXCOG00000019457	-	92	52.195
ENSXCOG00000019492	-	96	52.157	ENSXCOG00000000354	-	74	52.157
ENSXCOG00000019492	-	93	43.478	ENSXCOG00000013213	-	61	42.222
ENSXCOG00000019492	-	98	51.136	ENSXCOG00000001226	-	92	51.136
ENSXCOG00000019492	-	99	40.580	ENSXCOG00000002869	-	62	42.857
ENSXCOG00000019492	-	99	46.188	ENSXCOG00000019482	-	83	53.097
ENSXCOG00000019492	-	94	56.522	ENSXCOG00000019484	-	85	52.874
ENSXCOG00000019492	-	95	49.425	ENSXCOG00000008062	-	95	53.333
ENSXCOG00000019492	-	97	50.000	ENSXCOG00000000254	-	65	54.255
ENSXCOG00000019492	-	98	41.827	ENSXCOG00000007987	-	86	44.545
ENSXCOG00000019492	-	100	37.168	ENSXCOG00000001645	si:dkey-89b17.4	74	39.683
ENSXCOG00000019492	-	99	53.846	ENSXCOG00000007981	-	92	50.413
ENSXCOG00000019492	-	100	47.791	ENSXCOG00000007376	-	91	54.386
ENSXCOG00000019492	-	93	50.213	ENSXCOG00000006553	-	93	52.212
ENSXCOG00000019492	-	93	45.652	ENSXCOG00000009186	-	100	43.689
ENSXCOG00000019492	-	100	51.538	ENSXCOG00000019401	-	90	50.000
ENSXCOG00000019492	-	100	52.529	ENSXCOG00000013004	-	77	52.140
ENSXCOG00000019492	-	99	40.984	ENSXCOG00000019382	-	85	50.000
ENSXCOG00000019492	-	95	46.739	ENSXCOG00000014360	-	50	47.273
ENSXCOG00000019492	-	96	50.704	ENSXCOG00000006951	-	75	52.381
ENSXCOG00000019492	-	99	42.347	ENSXCOG00000014363	-	91	45.000
ENSXCOG00000019492	-	95	55.319	ENSXCOG00000010488	-	63	55.319
ENSXCOG00000019492	-	96	42.857	ENSXCOG00000003441	-	72	42.857
ENSXCOG00000019492	-	87	51.220	ENSXCOG00000012064	-	67	50.000
ENSXCOG00000019492	-	93	47.619	ENSXCOG00000010576	-	77	50.000
ENSXCOG00000019492	-	100	48.529	ENSXCOG00000006614	-	94	54.167
ENSXCOG00000019492	-	87	49.167	ENSXCOG00000010950	si:dkey-210j14.3	69	48.913
ENSXCOG00000019492	-	89	43.617	ENSXCOG00000011372	-	90	41.509
ENSXCOG00000019492	-	98	46.970	ENSXCOG00000010259	-	55	54.054
ENSXCOG00000019492	-	100	50.980	ENSXCOG00000017328	-	86	50.980
ENSXCOG00000019492	-	99	52.000	ENSXCOG00000003472	-	94	52.000
ENSXCOG00000019492	-	98	53.409	ENSXCOG00000009003	-	94	55.253
ENSXCOG00000019492	-	84	37.838	ENSXCOG00000019861	-	53	37.838
ENSXCOG00000019492	-	100	43.556	ENSXCOG00000007937	-	84	43.556
ENSXCOG00000019492	-	84	36.893	ENSXCOG00000014367	scrt2	51	36.893
ENSXCOG00000019492	-	100	50.943	ENSXCOG00000015441	-	89	58.407
ENSXCOG00000019492	-	93	44.314	ENSXCOG00000003431	-	78	50.442
ENSXCOG00000019492	-	91	40.392	ENSXCOG00000003435	-	84	46.491
ENSXCOG00000019492	-	99	57.709	ENSXCOG00000010507	-	53	57.709
ENSXCOG00000019492	-	96	30.744	ENSXCOG00000002714	-	92	30.744
ENSXCOG00000019492	-	99	44.351	ENSXCOG00000007979	-	76	44.867
ENSXCOG00000019492	-	95	39.037	ENSXCOG00000013870	-	72	44.348
ENSXCOG00000019492	-	93	46.667	ENSXCOG00000007396	-	86	48.246
ENSXCOG00000019492	-	94	46.586	ENSXCOG00000003093	-	83	51.351
ENSXCOG00000019492	-	96	42.208	ENSXCOG00000009668	-	76	42.208
ENSXCOG00000019492	-	97	52.941	ENSXCOG00000007529	-	99	53.982
ENSXCOG00000019492	-	100	47.150	ENSXCOG00000016307	-	94	47.150
ENSXCOG00000019492	-	89	41.772	ENSXCOG00000009772	-	79	41.237
ENSXCOG00000019492	-	97	40.000	ENSXCOG00000015084	snai2	60	40.000
ENSXCOG00000019492	-	99	52.709	ENSXCOG00000019443	-	96	53.333
ENSXCOG00000019492	-	97	43.860	ENSXCOG00000009768	-	79	43.860
ENSXCOG00000019492	-	99	45.833	ENSXCOG00000013066	-	88	45.833
ENSXCOG00000019492	-	98	42.927	ENSXCOG00000002857	-	94	46.414
ENSXCOG00000019492	-	97	44.393	ENSXCOG00000016567	-	76	52.632
ENSXCOG00000019492	-	87	43.939	ENSXCOG00000018615	-	86	43.939
ENSXCOG00000019492	-	95	40.411	ENSXCOG00000010948	-	59	51.948
ENSXCOG00000019492	-	94	42.708	ENSXCOG00000003468	-	79	50.575
ENSXCOG00000019492	-	90	44.643	ENSXCOG00000005697	-	94	44.643
ENSXCOG00000019492	-	97	48.649	ENSXCOG00000007414	-	95	49.020
ENSXCOG00000019492	-	100	52.451	ENSXCOG00000001116	-	99	52.451
ENSXCOG00000019492	-	97	53.097	ENSXCOG00000015312	-	98	51.373
ENSXCOG00000019492	-	96	55.319	ENSXCOG00000016117	-	98	57.792
ENSXCOG00000019492	-	96	43.210	ENSXCOG00000015435	-	79	64.516
ENSXCOG00000019492	-	87	46.753	ENSXCOG00000009674	-	97	45.455
ENSXCOG00000019492	-	95	46.748	ENSXCOG00000010567	-	92	50.000
ENSXCOG00000019492	-	94	50.667	ENSXCOG00000012458	-	64	51.327
ENSXCOG00000019492	-	94	45.455	ENSXCOG00000017871	zgc:113343	66	46.087
ENSXCOG00000019492	-	97	38.333	ENSXCOG00000008567	prdm5	78	38.202
ENSXCOG00000019492	-	98	54.688	ENSXCOG00000009777	-	80	54.688
ENSXCOG00000019492	-	99	46.190	ENSXCOG00000007945	-	88	53.982
ENSXCOG00000019492	-	89	39.614	ENSXCOG00000013787	-	65	41.525
ENSXCOG00000019492	-	95	48.819	ENSXCOG00000001292	-	87	48.583
ENSXCOG00000019492	-	97	43.981	ENSXCOG00000003484	-	67	43.981
ENSXCOG00000019492	-	93	49.425	ENSXCOG00000019149	znf526	65	47.009
ENSXCOG00000019492	-	84	38.835	ENSXCOG00000019675	scrt1b	50	40.594
ENSXCOG00000019492	-	95	44.828	ENSXCOG00000007076	-	99	46.795
ENSXCOG00000019492	-	100	48.058	ENSXCOG00000007994	-	93	51.765
ENSXCOG00000019492	-	89	46.667	ENSXCOG00000009781	-	64	47.552
ENSXCOG00000019492	-	99	47.917	ENSXCOG00000003451	-	92	51.282
ENSXCOG00000019492	-	95	45.200	ENSXCOG00000009798	-	73	45.200
ENSXCOG00000019492	-	100	47.087	ENSXCOG00000007139	-	77	53.017
ENSXCOG00000019492	-	94	45.185	ENSXCOG00000003532	-	75	47.934
ENSXCOG00000019492	-	97	53.378	ENSXCOG00000007957	-	96	45.894
ENSXCOG00000019492	-	97	42.969	ENSXCOG00000003538	-	98	50.000
ENSXCOG00000019492	-	74	40.351	ENSXCOG00000015428	-	97	42.373
ENSXCOG00000019492	-	100	43.363	ENSXCOG00000003530	-	81	48.673
ENSXCOG00000019492	-	98	51.333	ENSXCOG00000003537	-	81	51.333
ENSXCOG00000019492	-	93	48.259	ENSXCOG00000019377	-	94	46.899
ENSXCOG00000019492	-	100	48.387	ENSXCOG00000007406	-	99	53.982
ENSXCOG00000019492	-	98	34.444	ENSXCOG00000003001	-	95	34.444
ENSXCOG00000019492	-	97	35.025	ENSXCOG00000007499	zbtb41	65	37.168
ENSXCOG00000019492	-	99	32.178	ENSXCOG00000000036	znf341	60	32.178
ENSXCOG00000019492	-	93	42.233	ENSXCOG00000009992	zbtb47b	85	42.233
ENSXCOG00000019492	-	99	46.667	ENSXCOG00000002512	-	78	57.322
ENSXCOG00000019492	-	99	52.381	ENSXCOG00000001200	-	97	52.381
ENSXCOG00000019492	-	99	41.398	ENSXCOG00000009785	-	73	41.398
ENSXCOG00000019492	-	97	51.550	ENSXCOG00000008116	-	98	51.550
ENSXCOG00000019492	-	96	39.153	ENSXCOG00000009597	ZNF319	97	39.153
ENSXCOG00000019492	-	99	50.510	ENSXCOG00000000528	-	86	57.018
ENSXCOG00000019492	-	97	54.386	ENSXCOG00000016860	-	99	53.982
ENSXCOG00000019492	-	92	38.710	ENSXCOG00000013504	znf384l	54	37.056
ENSXCOG00000019492	-	99	41.872	ENSXCOG00000009794	-	86	41.872
ENSXCOG00000019492	-	89	47.727	ENSXCOG00000009665	-	96	44.318
ENSXCOG00000019492	-	96	36.571	ENSXCOG00000018117	znf710b	52	36.571
ENSXCOG00000019492	-	95	48.276	ENSXCOG00000007413	-	60	48.276
ENSXCOG00000019492	-	93	48.182	ENSXCOG00000018253	-	91	51.327
ENSXCOG00000019492	-	91	39.200	ENSXCOG00000010422	-	54	32.338
ENSXCOG00000019492	-	98	47.179	ENSXCOG00000007368	-	99	46.919
ENSXCOG00000019492	-	90	46.226	ENSXCOG00000013306	-	57	49.383
ENSXCOG00000019492	-	89	37.963	ENSXCOG00000008003	-	58	39.806
ENSXCOG00000019492	-	98	47.083	ENSXCOG00000003896	-	64	47.083
ENSXCOG00000019492	-	94	54.950	ENSXCOG00000008978	-	92	54.950
ENSXCOG00000019492	-	88	40.426	ENSXCOG00000018315	-	92	48.052
ENSXCOG00000019492	-	97	51.316	ENSXCOG00000008083	-	93	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019492	-	89	53.191	ENSAPOG00000005767	-	100	53.191	Acanthochromis_polyacanthus
ENSXCOG00000019492	-	87	53.500	ENSAOCG00000000570	-	65	53.500	Amphiprion_ocellaris
ENSXCOG00000019492	-	95	44.928	ENSAPEG00000018796	-	90	44.928	Amphiprion_percula
ENSXCOG00000019492	-	95	37.561	ENSCVAG00000018507	-	77	41.322	Cyprinodon_variegatus
ENSXCOG00000019492	-	94	41.631	ENSFHEG00000022534	-	81	41.631	Fundulus_heteroclitus
ENSXCOG00000019492	-	93	44.608	ENSKMAG00000013745	-	72	51.327	Kryptolebias_marmoratus
ENSXCOG00000019492	-	99	44.615	ENSMAMG00000018114	-	93	43.478	Mastacembelus_armatus
ENSXCOG00000019492	-	99	40.394	ENSMAMG00000009817	-	89	39.506	Mastacembelus_armatus
ENSXCOG00000019492	-	99	51.402	ENSMZEG00005016808	-	85	51.402	Maylandia_zebra
ENSXCOG00000019492	-	100	47.843	ENSMALG00000001085	-	89	50.442	Monopterus_albus
ENSXCOG00000019492	-	98	40.000	ENSMALG00000012757	-	93	40.000	Monopterus_albus
ENSXCOG00000019492	-	94	51.634	ENSMALG00000012116	-	99	51.412	Monopterus_albus
ENSXCOG00000019492	-	98	39.037	ENSMALG00000008930	-	95	39.037	Monopterus_albus
ENSXCOG00000019492	-	91	52.632	ENSMALG00000004579	-	91	52.632	Monopterus_albus
ENSXCOG00000019492	-	99	47.945	ENSNBRG00000013501	-	92	47.945	Neolamprologus_brichardi
ENSXCOG00000019492	-	99	42.473	ENSOMEG00000021420	-	65	42.473	Oryzias_melastigma
ENSXCOG00000019492	-	93	42.241	ENSPREG00000014898	-	66	42.241	Poecilia_reticulata
ENSXCOG00000019492	-	96	47.778	ENSPNYG00000007756	-	89	37.745	Pundamilia_nyererei
ENSXCOG00000019492	-	90	48.252	ENSSDUG00000001263	-	98	48.252	Seriola_dumerili
ENSXCOG00000019492	-	96	42.857	ENSSLDG00000023661	-	89	42.857	Seriola_lalandi_dorsalis
ENSXCOG00000019492	-	98	44.712	ENSTRUG00000012273	-	90	44.712	Takifugu_rubripes
ENSXCOG00000019492	-	93	51.656	ENSTRUG00000023925	-	59	51.656	Takifugu_rubripes
ENSXCOG00000019492	-	94	52.740	ENSTRUG00000003111	-	85	52.740	Takifugu_rubripes
ENSXCOG00000019492	-	93	48.529	ENSTRUG00000022919	-	68	53.642	Takifugu_rubripes
ENSXCOG00000019492	-	94	55.789	ENSTRUG00000001268	-	91	55.789	Takifugu_rubripes
ENSXCOG00000019492	-	97	47.619	ENSTRUG00000022206	-	64	47.234	Takifugu_rubripes
ENSXCOG00000019492	-	97	51.485	ENSTNIG00000005856	-	99	52.679	Tetraodon_nigroviridis
ENSXCOG00000019492	-	97	52.083	ENSXMAG00000022297	-	99	52.083	Xiphophorus_maculatus