EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019497 (Gene tree)
Gene ID: -
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain%2C bifurcated 1b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 12598 bases
Position: chrKQ557218.1:12495324-12507921
Accession: ZDB-GENE-061013-224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026107	MBD	PF01429.19	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026421	-	3567	-	ENSXCOP00000026107	1188 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019497	setdb1b	90	72.316	ENSG00000143379	SETDB1	98	56.933	Homo_sapiens
ENSXCOG00000019497	setdb1b	90	79.521	ENSAPOG00000016228	setdb1b	99	77.612	Acanthochromis_polyacanthus
ENSXCOG00000019497	setdb1b	87	73.446	ENSAMEG00000001160	SETDB1	88	72.881	Ailuropoda_melanoleuca
ENSXCOG00000019497	setdb1b	92	81.579	ENSACIG00000007359	setdb1b	100	80.526	Amphilophus_citrinellus
ENSXCOG00000019497	setdb1b	93	77.353	ENSAOCG00000005586	setdb1b	100	78.115	Amphiprion_ocellaris
ENSXCOG00000019497	setdb1b	93	76.585	ENSAPEG00000007774	setdb1b	99	77.114	Amphiprion_percula
ENSXCOG00000019497	setdb1b	90	79.500	ENSATEG00000023520	setdb1b	99	79.500	Anabas_testudineus
ENSXCOG00000019497	setdb1b	90	73.410	ENSAPLG00000013908	SETDB1	99	55.760	Anas_platyrhynchos
ENSXCOG00000019497	setdb1b	90	72.316	ENSANAG00000001819	SETDB1	98	56.468	Aotus_nancymaae
ENSXCOG00000019497	setdb1b	91	78.392	ENSACLG00000020489	setdb1b	99	77.889	Astatotilapia_calliptera
ENSXCOG00000019497	setdb1b	52	56.044	ENSAMXG00000010030	setdb1a	56	56.044	Astyanax_mexicanus
ENSXCOG00000019497	setdb1b	83	77.083	ENSAMXG00000016168	setdb1b	98	77.083	Astyanax_mexicanus
ENSXCOG00000019497	setdb1b	89	74.706	ENSBTAG00000000098	SETDB1	98	56.162	Bos_taurus
ENSXCOG00000019497	setdb1b	90	72.316	ENSCJAG00000006972	SETDB1	98	56.293	Callithrix_jacchus
ENSXCOG00000019497	setdb1b	87	73.446	ENSCAFG00000023501	SETDB1	99	58.698	Canis_familiaris
ENSXCOG00000019497	setdb1b	87	73.446	ENSCAFG00020013596	SETDB1	98	58.132	Canis_lupus_dingo
ENSXCOG00000019497	setdb1b	90	72.881	ENSCHIG00000010698	SETDB1	98	55.634	Capra_hircus
ENSXCOG00000019497	setdb1b	75	60.021	ENSTSYG00000012646	SETDB1	93	60.578	Carlito_syrichta
ENSXCOG00000019497	setdb1b	67	69.758	ENSCAPG00000013619	SETDB1	86	59.420	Cavia_aperea
ENSXCOG00000019497	setdb1b	90	73.446	ENSCPOG00000001632	SETDB1	98	56.444	Cavia_porcellus
ENSXCOG00000019497	setdb1b	90	72.316	ENSCCAG00000024882	SETDB1	88	71.751	Cebus_capucinus
ENSXCOG00000019497	setdb1b	87	72.316	ENSCATG00000044888	SETDB1	98	54.856	Cercocebus_atys
ENSXCOG00000019497	setdb1b	90	72.881	ENSCLAG00000000242	SETDB1	98	55.762	Chinchilla_lanigera
ENSXCOG00000019497	setdb1b	79	71.751	ENSCSAG00000018034	SETDB1	99	58.456	Chlorocebus_sabaeus
ENSXCOG00000019497	setdb1b	87	81.884	ENSCHOG00000004013	SETDB1	85	81.159	Choloepus_hoffmanni
ENSXCOG00000019497	setdb1b	99	55.905	ENSCPBG00000008716	SETDB1	99	56.226	Chrysemys_picta_bellii
ENSXCOG00000019497	setdb1b	80	71.751	ENSCANG00000036388	SETDB1	87	71.186	Colobus_angolensis_palliatus
ENSXCOG00000019497	setdb1b	87	69.730	ENSCGRG00001010822	Setdb1	98	55.808	Cricetulus_griseus_chok1gshd
ENSXCOG00000019497	setdb1b	87	69.730	ENSCGRG00000005953	Setdb1	98	55.416	Cricetulus_griseus_crigri
ENSXCOG00000019497	setdb1b	92	76.000	ENSCSEG00000002988	setdb1b	100	76.500	Cynoglossus_semilaevis
ENSXCOG00000019497	setdb1b	91	83.663	ENSCVAG00000008877	setdb1b	99	81.138	Cyprinodon_variegatus
ENSXCOG00000019497	setdb1b	50	72.222	ENSDARG00000041243	setdb1a	66	84.848	Danio_rerio
ENSXCOG00000019497	setdb1b	90	80.412	ENSDARG00000099021	setdb1b	99	80.412	Danio_rerio
ENSXCOG00000019497	setdb1b	90	72.881	ENSDNOG00000007754	SETDB1	98	56.337	Dasypus_novemcinctus
ENSXCOG00000019497	setdb1b	87	75.294	ENSDORG00000006830	Setdb1	98	55.306	Dipodomys_ordii
ENSXCOG00000019497	setdb1b	69	45.416	ENSEBUG00000005735	setdb1b	95	45.640	Eptatretus_burgeri
ENSXCOG00000019497	setdb1b	90	72.881	ENSEASG00005002061	SETDB1	98	56.130	Equus_asinus_asinus
ENSXCOG00000019497	setdb1b	90	72.881	ENSECAG00000023954	SETDB1	98	55.633	Equus_caballus
ENSXCOG00000019497	setdb1b	79	73.446	ENSEEUG00000015825	SETDB1	76	72.881	Erinaceus_europaeus
ENSXCOG00000019497	setdb1b	91	83.799	ENSELUG00000013948	setdb1b	99	83.240	Esox_lucius
ENSXCOG00000019497	setdb1b	75	70.213	ENSELUG00000006204	-	68	70.213	Esox_lucius
ENSXCOG00000019497	setdb1b	87	73.446	ENSFCAG00000009655	SETDB1	98	55.789	Felis_catus
ENSXCOG00000019497	setdb1b	90	72.881	ENSFDAG00000021515	SETDB1	88	72.316	Fukomys_damarensis
ENSXCOG00000019497	setdb1b	91	86.013	ENSFHEG00000022195	setdb1b	99	83.085	Fundulus_heteroclitus
ENSXCOG00000019497	setdb1b	99	69.161	ENSGMOG00000005993	setdb1b	100	70.099	Gadus_morhua
ENSXCOG00000019497	setdb1b	98	57.504	ENSGALG00000024051	SETDB1	90	57.425	Gallus_gallus
ENSXCOG00000019497	setdb1b	88	89.958	ENSGAFG00000012805	setdb1b	99	85.093	Gambusia_affinis
ENSXCOG00000019497	setdb1b	99	69.623	ENSGACG00000011675	setdb1b	100	69.623	Gasterosteus_aculeatus
ENSXCOG00000019497	setdb1b	99	56.542	ENSGAGG00000005348	SETDB1	99	56.595	Gopherus_agassizii
ENSXCOG00000019497	setdb1b	90	72.316	ENSGGOG00000016308	SETDB1	98	56.889	Gorilla_gorilla
ENSXCOG00000019497	setdb1b	91	78.392	ENSHBUG00000004618	setdb1b	99	77.889	Haplochromis_burtoni
ENSXCOG00000019497	setdb1b	87	72.881	ENSHGLG00000011098	SETDB1	84	72.316	Heterocephalus_glaber_female
ENSXCOG00000019497	setdb1b	87	72.881	ENSHGLG00100009789	SETDB1	85	72.316	Heterocephalus_glaber_male
ENSXCOG00000019497	setdb1b	92	72.637	ENSHCOG00000014567	setdb1b	99	73.134	Hippocampus_comes
ENSXCOG00000019497	setdb1b	89	77.778	ENSIPUG00000004536	setdb1	98	77.778	Ictalurus_punctatus
ENSXCOG00000019497	setdb1b	77	61.765	ENSIPUG00000007923	setdb1a	76	61.176	Ictalurus_punctatus
ENSXCOG00000019497	setdb1b	82	75.130	ENSSTOG00000006770	SETDB1	98	55.766	Ictidomys_tridecemlineatus
ENSXCOG00000019497	setdb1b	87	81.619	ENSKMAG00000001197	setdb1b	97	78.974	Kryptolebias_marmoratus
ENSXCOG00000019497	setdb1b	91	77.114	ENSLBEG00000025862	setdb1b	100	74.882	Labrus_bergylta
ENSXCOG00000019497	setdb1b	93	60.656	ENSLACG00000011159	SETDB1	99	54.766	Latimeria_chalumnae
ENSXCOG00000019497	setdb1b	90	72.881	ENSLAFG00000004006	SETDB1	98	55.725	Loxodonta_africana
ENSXCOG00000019497	setdb1b	87	72.316	ENSMFAG00000042328	SETDB1	98	56.700	Macaca_fascicularis
ENSXCOG00000019497	setdb1b	87	72.316	ENSMMUG00000023235	SETDB1	98	56.656	Macaca_mulatta
ENSXCOG00000019497	setdb1b	87	72.316	ENSMNEG00000017223	SETDB1	98	56.700	Macaca_nemestrina
ENSXCOG00000019497	setdb1b	87	72.316	ENSMLEG00000033050	SETDB1	98	56.700	Mandrillus_leucophaeus
ENSXCOG00000019497	setdb1b	90	81.959	ENSMAMG00000015176	setdb1b	86	81.443	Mastacembelus_armatus
ENSXCOG00000019497	setdb1b	91	78.392	ENSMZEG00005016099	setdb1b	99	77.889	Maylandia_zebra
ENSXCOG00000019497	setdb1b	86	56.101	ENSMGAG00000001018	SETDB1	97	56.101	Meleagris_gallopavo
ENSXCOG00000019497	setdb1b	84	74.011	ENSMAUG00000021391	Setdb1	99	58.829	Mesocricetus_auratus
ENSXCOG00000019497	setdb1b	90	72.881	ENSMICG00000000425	SETDB1	98	56.515	Microcebus_murinus
ENSXCOG00000019497	setdb1b	98	55.253	ENSMOCG00000017407	Setdb1	98	55.919	Microtus_ochrogaster
ENSXCOG00000019497	setdb1b	92	77.451	ENSMMOG00000016162	setdb1b	99	77.500	Mola_mola
ENSXCOG00000019497	setdb1b	89	71.429	ENSMODG00000018821	SETDB1	89	55.389	Monodelphis_domestica
ENSXCOG00000019497	setdb1b	91	77.717	ENSMALG00000007801	setdb1b	100	76.630	Monopterus_albus
ENSXCOG00000019497	setdb1b	87	72.881	MGP_CAROLIEiJ_G0025342	Setdb1	98	55.096	Mus_caroli
ENSXCOG00000019497	setdb1b	90	73.988	ENSMUSG00000015697	Setdb1	88	73.410	Mus_musculus
ENSXCOG00000019497	setdb1b	90	73.446	ENSMPUG00000004298	SETDB1	88	72.881	Mustela_putorius_furo
ENSXCOG00000019497	setdb1b	90	72.881	ENSNGAG00000020151	Setdb1	98	56.871	Nannospalax_galili
ENSXCOG00000019497	setdb1b	92	78.061	ENSNBRG00000003147	setdb1b	100	77.551	Neolamprologus_brichardi
ENSXCOG00000019497	setdb1b	90	66.842	ENSNLEG00000009996	SETDB1	87	66.316	Nomascus_leucogenys
ENSXCOG00000019497	setdb1b	88	74.556	ENSMEUG00000000555	-	88	73.964	Notamacropus_eugenii
ENSXCOG00000019497	setdb1b	81	72.316	ENSMEUG00000006544	-	76	71.751	Notamacropus_eugenii
ENSXCOG00000019497	setdb1b	84	65.942	ENSOPRG00000015349	SETDB1	88	65.217	Ochotona_princeps
ENSXCOG00000019497	setdb1b	87	72.881	ENSODEG00000012471	SETDB1	98	56.610	Octodon_degus
ENSXCOG00000019497	setdb1b	91	78.500	ENSONIG00000006454	setdb1b	100	78.000	Oreochromis_niloticus
ENSXCOG00000019497	setdb1b	86	72.881	ENSOCUG00000003642	SETDB1	88	72.316	Oryctolagus_cuniculus
ENSXCOG00000019497	setdb1b	91	79.310	ENSORLG00000010602	setdb1b	99	78.325	Oryzias_latipes
ENSXCOG00000019497	setdb1b	69	78.266	ENSORLG00020008638	setdb1b	97	78.960	Oryzias_latipes_hni
ENSXCOG00000019497	setdb1b	91	77.404	ENSORLG00015014543	setdb1b	99	76.442	Oryzias_latipes_hsok
ENSXCOG00000019497	setdb1b	93	76.899	ENSOMEG00000009457	setdb1b	100	77.413	Oryzias_melastigma
ENSXCOG00000019497	setdb1b	90	72.881	ENSOGAG00000010320	SETDB1	98	53.894	Otolemur_garnettii
ENSXCOG00000019497	setdb1b	90	72.881	ENSOARG00000020880	SETDB1	98	56.012	Ovis_aries
ENSXCOG00000019497	setdb1b	90	72.316	ENSPPAG00000041015	SETDB1	98	56.855	Pan_paniscus
ENSXCOG00000019497	setdb1b	87	72.881	ENSPPRG00000005462	SETDB1	98	56.333	Panthera_pardus
ENSXCOG00000019497	setdb1b	87	72.881	ENSPTIG00000014233	SETDB1	98	56.308	Panthera_tigris_altaica
ENSXCOG00000019497	setdb1b	90	72.316	ENSPTRG00000001267	SETDB1	98	56.778	Pan_troglodytes
ENSXCOG00000019497	setdb1b	87	72.316	ENSPANG00000020214	SETDB1	98	54.969	Papio_anubis
ENSXCOG00000019497	setdb1b	99	56.759	ENSPKIG00000010963	setdb1b	87	74.619	Paramormyrops_kingsleyae
ENSXCOG00000019497	setdb1b	59	58.424	ENSPSIG00000008407	SETDB1	84	58.669	Pelodiscus_sinensis
ENSXCOG00000019497	setdb1b	84	72.881	ENSPEMG00000010553	Setdb1	100	57.108	Peromyscus_maniculatus_bairdii
ENSXCOG00000019497	setdb1b	98	47.339	ENSPMAG00000001573	setdb1b	86	51.113	Petromyzon_marinus
ENSXCOG00000019497	setdb1b	99	85.714	ENSPFOG00000004623	-	94	85.714	Poecilia_formosa
ENSXCOG00000019497	setdb1b	98	83.952	ENSPFOG00000004429	setdb1b	100	85.442	Poecilia_formosa
ENSXCOG00000019497	setdb1b	91	89.958	ENSPLAG00000019076	-	99	86.432	Poecilia_latipinna
ENSXCOG00000019497	setdb1b	88	89.958	ENSPLAG00000017117	setdb1b	99	83.230	Poecilia_latipinna
ENSXCOG00000019497	setdb1b	91	89.958	ENSPMEG00000006468	setdb1b	93	90.103	Poecilia_mexicana
ENSXCOG00000019497	setdb1b	91	89.331	ENSPREG00000017459	setdb1b	99	88.442	Poecilia_reticulata
ENSXCOG00000019497	setdb1b	90	72.316	ENSPPYG00000000887	SETDB1	98	56.767	Pongo_abelii
ENSXCOG00000019497	setdb1b	73	61.381	ENSPCAG00000002527	SETDB1	88	59.324	Procavia_capensis
ENSXCOG00000019497	setdb1b	87	72.881	ENSPCOG00000027869	SETDB1	98	56.613	Propithecus_coquereli
ENSXCOG00000019497	setdb1b	87	61.582	ENSPVAG00000004355	SETDB1	84	61.017	Pteropus_vampyrus
ENSXCOG00000019497	setdb1b	92	78.680	ENSPNYG00000003997	setdb1b	99	78.173	Pundamilia_nyererei
ENSXCOG00000019497	setdb1b	89	77.487	ENSPNAG00000021617	setdb1b	98	77.487	Pygocentrus_nattereri
ENSXCOG00000019497	setdb1b	73	64.286	ENSPNAG00000003444	setdb1a	61	63.571	Pygocentrus_nattereri
ENSXCOG00000019497	setdb1b	92	61.883	ENSRNOG00000021143	Setdb1	98	55.223	Rattus_norvegicus
ENSXCOG00000019497	setdb1b	90	72.316	ENSRBIG00000042359	SETDB1	98	56.700	Rhinopithecus_bieti
ENSXCOG00000019497	setdb1b	90	72.316	ENSRROG00000032628	SETDB1	98	56.656	Rhinopithecus_roxellana
ENSXCOG00000019497	setdb1b	90	72.316	ENSSBOG00000028608	SETDB1	98	56.173	Saimiri_boliviensis_boliviensis
ENSXCOG00000019497	setdb1b	90	71.751	ENSSHAG00000012701	SETDB1	98	56.786	Sarcophilus_harrisii
ENSXCOG00000019497	setdb1b	90	73.892	ENSSFOG00015022183	setdb1	88	74.384	Scleropages_formosus
ENSXCOG00000019497	setdb1b	92	75.264	ENSSMAG00000015398	setdb1b	97	75.775	Scophthalmus_maximus
ENSXCOG00000019497	setdb1b	91	78.109	ENSSDUG00000007513	setdb1b	99	79.104	Seriola_dumerili
ENSXCOG00000019497	setdb1b	91	78.109	ENSSLDG00000015209	setdb1b	99	78.607	Seriola_lalandi_dorsalis
ENSXCOG00000019497	setdb1b	89	73.099	ENSSPUG00000002969	SETDB1	99	56.529	Sphenodon_punctatus
ENSXCOG00000019497	setdb1b	89	72.881	ENSSSCG00000006645	SETDB1	99	58.154	Sus_scrofa
ENSXCOG00000019497	setdb1b	86	68.681	ENSTGUG00000004684	SETDB1	99	55.875	Taeniopygia_guttata
ENSXCOG00000019497	setdb1b	92	74.752	ENSTRUG00000014641	setdb1b	99	74.752	Takifugu_rubripes
ENSXCOG00000019497	setdb1b	99	66.849	ENSTNIG00000008065	setdb1b	99	68.327	Tetraodon_nigroviridis
ENSXCOG00000019497	setdb1b	84	72.881	ENSTBEG00000009306	SETDB1	100	57.143	Tupaia_belangeri
ENSXCOG00000019497	setdb1b	77	72.881	ENSTTRG00000006966	SETDB1	85	57.738	Tursiops_truncatus
ENSXCOG00000019497	setdb1b	87	73.446	ENSUAMG00000026724	SETDB1	88	72.881	Ursus_americanus
ENSXCOG00000019497	setdb1b	87	73.446	ENSUMAG00000003141	SETDB1	88	72.881	Ursus_maritimus
ENSXCOG00000019497	setdb1b	73	61.341	ENSVPAG00000005440	SETDB1	75	61.951	Vicugna_pacos
ENSXCOG00000019497	setdb1b	87	73.446	ENSVVUG00000011637	SETDB1	98	56.235	Vulpes_vulpes
ENSXCOG00000019497	setdb1b	98	55.245	ENSXETG00000008936	setdb1	98	55.745	Xenopus_tropicalis
ENSXCOG00000019497	setdb1b	91	91.176	ENSXMAG00000016600	setdb1b	99	89.950	Xiphophorus_maculatus