EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019504 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: fc04b12|wu:fc04b12|zgc:110214
Full Name: UTP23%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2213 bases
Position: chrKQ557205.1:7752864-7755076
Accession: ZDB-GENE-050417-353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026115	Fcf1	PF04900.12	1.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026429	-	768	-	ENSXCOP00000026115	255 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019504	utp23	84	63.084	ENSG00000147679	UTP23	96	65.152	Homo_sapiens
ENSXCOG00000019504	utp23	54	31.655	ENSAPOG00000010473	fcf1	68	31.884	Acanthochromis_polyacanthus
ENSXCOG00000019504	utp23	63	76.250	ENSAPOG00000013233	UTP23	74	73.988	Acanthochromis_polyacanthus
ENSXCOG00000019504	utp23	62	76.730	ENSAPOG00000004608	-	78	76.506	Acanthochromis_polyacanthus
ENSXCOG00000019504	utp23	87	80.631	ENSAPOG00000004620	utp23	91	80.349	Acanthochromis_polyacanthus
ENSXCOG00000019504	utp23	82	62.201	ENSAMEG00000010317	UTP23	84	62.201	Ailuropoda_melanoleuca
ENSXCOG00000019504	utp23	100	85.603	ENSACIG00000013638	utp23	97	85.603	Amphilophus_citrinellus
ENSXCOG00000019504	utp23	54	30.935	ENSAOCG00000003752	fcf1	68	31.159	Amphiprion_ocellaris
ENSXCOG00000019504	utp23	90	81.659	ENSAOCG00000016307	utp23	91	81.659	Amphiprion_ocellaris
ENSXCOG00000019504	utp23	54	30.935	ENSAPEG00000011644	fcf1	74	31.159	Amphiprion_percula
ENSXCOG00000019504	utp23	90	81.739	ENSAPEG00000018976	utp23	91	81.739	Amphiprion_percula
ENSXCOG00000019504	utp23	100	90.588	ENSATEG00000007509	utp23	100	90.588	Anabas_testudineus
ENSXCOG00000019504	utp23	85	64.977	ENSACAG00000011061	UTP23	85	65.278	Anolis_carolinensis
ENSXCOG00000019504	utp23	84	61.215	ENSANAG00000036252	-	81	60.287	Aotus_nancymaae
ENSXCOG00000019504	utp23	84	61.682	ENSANAG00000025273	-	84	60.766	Aotus_nancymaae
ENSXCOG00000019504	utp23	95	70.248	ENSAMXG00000020989	utp23	89	70.000	Astyanax_mexicanus
ENSXCOG00000019504	utp23	84	62.617	ENSBTAG00000040422	UTP23	84	61.722	Bos_taurus
ENSXCOG00000019504	utp23	50	32.812	WBGene00009266	F30A10.9	69	30.714	Caenorhabditis_elegans
ENSXCOG00000019504	utp23	85	40.271	WBGene00016411	C34E10.10	84	37.963	Caenorhabditis_elegans
ENSXCOG00000019504	utp23	84	61.682	ENSCJAG00000005903	UTP23	84	60.766	Callithrix_jacchus
ENSXCOG00000019504	utp23	82	63.158	ENSCAFG00000000821	UTP23	84	63.158	Canis_familiaris
ENSXCOG00000019504	utp23	82	63.158	ENSCAFG00020004174	UTP23	84	63.158	Canis_lupus_dingo
ENSXCOG00000019504	utp23	84	62.617	ENSCHIG00000019828	UTP23	84	61.722	Capra_hircus
ENSXCOG00000019504	utp23	87	61.991	ENSTSYG00000001644	UTP23	84	61.722	Carlito_syrichta
ENSXCOG00000019504	utp23	86	61.187	ENSCPOG00000034561	UTP23	77	60.766	Cavia_porcellus
ENSXCOG00000019504	utp23	82	61.722	ENSCCAG00000030228	UTP23	84	61.722	Cebus_capucinus
ENSXCOG00000019504	utp23	84	61.682	ENSCATG00000035129	UTP23	84	60.766	Cercocebus_atys
ENSXCOG00000019504	utp23	82	53.589	ENSCLAG00000000531	-	91	53.589	Chinchilla_lanigera
ENSXCOG00000019504	utp23	82	60.766	ENSCLAG00000005108	-	84	60.766	Chinchilla_lanigera
ENSXCOG00000019504	utp23	84	61.682	ENSCSAG00000010933	UTP23	84	60.766	Chlorocebus_sabaeus
ENSXCOG00000019504	utp23	82	63.636	ENSCHOG00000003145	UTP23	83	61.722	Choloepus_hoffmanni
ENSXCOG00000019504	utp23	84	65.888	ENSCPBG00000001634	UTP23	83	63.636	Chrysemys_picta_bellii
ENSXCOG00000019504	utp23	82	51.887	ENSCING00000012577	-	94	48.804	Ciona_intestinalis
ENSXCOG00000019504	utp23	54	32.857	ENSCING00000018434	-	62	34.375	Ciona_intestinalis
ENSXCOG00000019504	utp23	54	32.857	ENSCSAVG00000004997	-	65	34.375	Ciona_savignyi
ENSXCOG00000019504	utp23	82	52.857	ENSCSAVG00000003273	-	95	50.952	Ciona_savignyi
ENSXCOG00000019504	utp23	84	62.150	ENSCANG00000028461	UTP23	78	61.244	Colobus_angolensis_palliatus
ENSXCOG00000019504	utp23	82	60.766	ENSCGRG00001005218	Utp23	90	60.444	Cricetulus_griseus_chok1gshd
ENSXCOG00000019504	utp23	84	88.785	ENSCSEG00000011409	utp23	88	86.026	Cynoglossus_semilaevis
ENSXCOG00000019504	utp23	100	87.843	ENSCVAG00000003180	utp23	98	87.843	Cyprinodon_variegatus
ENSXCOG00000019504	utp23	54	34.043	ENSDARG00000102333	fcf1	69	34.043	Danio_rerio
ENSXCOG00000019504	utp23	90	79.039	ENSDARG00000105012	utp23	88	79.039	Danio_rerio
ENSXCOG00000019504	utp23	82	63.158	ENSDNOG00000033602	UTP23	83	63.158	Dasypus_novemcinctus
ENSXCOG00000019504	utp23	82	54.545	ENSDORG00000029054	-	77	54.545	Dipodomys_ordii
ENSXCOG00000019504	utp23	82	47.115	FBgn0031361	CG17652	83	47.115	Drosophila_melanogaster
ENSXCOG00000019504	utp23	84	44.601	ENSETEG00000017109	-	73	46.995	Echinops_telfairi
ENSXCOG00000019504	utp23	95	57.025	ENSETEG00000015401	-	83	60.287	Echinops_telfairi
ENSXCOG00000019504	utp23	84	54.206	ENSEBUG00000009876	utp23	90	53.110	Eptatretus_burgeri
ENSXCOG00000019504	utp23	55	30.282	ENSEBUG00000010373	fcf1	61	32.031	Eptatretus_burgeri
ENSXCOG00000019504	utp23	82	62.201	ENSEASG00005023141	UTP23	84	63.636	Equus_asinus_asinus
ENSXCOG00000019504	utp23	82	61.722	ENSECAG00000026844	UTP23	84	64.115	Equus_caballus
ENSXCOG00000019504	utp23	84	62.150	ENSEEUG00000004503	UTP23	84	61.244	Erinaceus_europaeus
ENSXCOG00000019504	utp23	96	80.328	ENSELUG00000005602	utp23	96	80.328	Esox_lucius
ENSXCOG00000019504	utp23	84	63.551	ENSFCAG00000036051	UTP23	84	63.158	Felis_catus
ENSXCOG00000019504	utp23	82	61.244	ENSFALG00000002299	UTP23	83	59.809	Ficedula_albicollis
ENSXCOG00000019504	utp23	82	61.722	ENSFDAG00000021034	UTP23	83	61.722	Fukomys_damarensis
ENSXCOG00000019504	utp23	99	90.079	ENSFHEG00000008581	utp23	99	89.286	Fundulus_heteroclitus
ENSXCOG00000019504	utp23	94	73.222	ENSGMOG00000015495	utp23	87	77.990	Gadus_morhua
ENSXCOG00000019504	utp23	84	63.551	ENSGALG00000032400	UTP23	84	61.244	Gallus_gallus
ENSXCOG00000019504	utp23	97	96.800	ENSGAFG00000002063	utp23	96	96.800	Gambusia_affinis
ENSXCOG00000019504	utp23	99	76.984	ENSGACG00000002979	utp23	100	76.984	Gasterosteus_aculeatus
ENSXCOG00000019504	utp23	84	63.551	ENSGGOG00000013203	UTP23	84	61.722	Gorilla_gorilla
ENSXCOG00000019504	utp23	100	87.451	ENSHBUG00000023376	utp23	100	87.451	Haplochromis_burtoni
ENSXCOG00000019504	utp23	82	60.766	ENSHGLG00000004025	UTP23	83	60.766	Heterocephalus_glaber_female
ENSXCOG00000019504	utp23	82	58.373	ENSHGLG00000020901	-	78	58.373	Heterocephalus_glaber_female
ENSXCOG00000019504	utp23	81	53.623	ENSHGLG00000008717	-	84	53.623	Heterocephalus_glaber_female
ENSXCOG00000019504	utp23	80	53.171	ENSHGLG00100012817	-	93	54.067	Heterocephalus_glaber_male
ENSXCOG00000019504	utp23	82	60.766	ENSHGLG00100018875	UTP23	83	60.766	Heterocephalus_glaber_male
ENSXCOG00000019504	utp23	98	76.000	ENSHCOG00000007006	utp23	92	82.533	Hippocampus_comes
ENSXCOG00000019504	utp23	85	77.523	ENSIPUG00000014437	utp23	82	75.714	Ictalurus_punctatus
ENSXCOG00000019504	utp23	82	61.244	ENSSTOG00000001411	UTP23	90	60.889	Ictidomys_tridecemlineatus
ENSXCOG00000019504	utp23	90	88.210	ENSKMAG00000002262	utp23	100	84.436	Kryptolebias_marmoratus
ENSXCOG00000019504	utp23	99	83.077	ENSLBEG00000012819	utp23	99	83.462	Labrus_bergylta
ENSXCOG00000019504	utp23	54	30.935	ENSLBEG00000000146	fcf1	68	31.159	Labrus_bergylta
ENSXCOG00000019504	utp23	92	66.667	ENSLACG00000014611	UTP23	83	66.986	Latimeria_chalumnae
ENSXCOG00000019504	utp23	95	66.805	ENSLOCG00000003289	utp23	86	70.000	Lepisosteus_oculatus
ENSXCOG00000019504	utp23	95	57.438	ENSLAFG00000001282	UTP23	84	61.244	Loxodonta_africana
ENSXCOG00000019504	utp23	84	62.150	ENSMFAG00000003374	UTP23	84	61.244	Macaca_fascicularis
ENSXCOG00000019504	utp23	84	62.150	ENSMMUG00000020284	UTP23	84	61.244	Macaca_mulatta
ENSXCOG00000019504	utp23	84	62.150	ENSMNEG00000028668	UTP23	84	61.244	Macaca_nemestrina
ENSXCOG00000019504	utp23	84	62.150	ENSMLEG00000032668	UTP23	78	61.244	Mandrillus_leucophaeus
ENSXCOG00000019504	utp23	100	89.804	ENSMAMG00000003259	utp23	100	87.059	Mastacembelus_armatus
ENSXCOG00000019504	utp23	100	87.059	ENSMZEG00005026398	utp23	100	87.059	Maylandia_zebra
ENSXCOG00000019504	utp23	84	64.019	ENSMGAG00000012472	UTP23	84	61.722	Meleagris_gallopavo
ENSXCOG00000019504	utp23	82	63.158	ENSMICG00000034720	UTP23	84	63.158	Microcebus_murinus
ENSXCOG00000019504	utp23	90	87.336	ENSMMOG00000014498	utp23	100	83.922	Mola_mola
ENSXCOG00000019504	utp23	84	60.748	ENSMODG00000004140	UTP23	83	59.809	Monodelphis_domestica
ENSXCOG00000019504	utp23	98	89.157	ENSMALG00000010867	utp23	98	89.157	Monopterus_albus
ENSXCOG00000019504	utp23	82	58.852	MGP_CAROLIEiJ_G0019781	Utp23	84	58.852	Mus_caroli
ENSXCOG00000019504	utp23	82	59.809	ENSMUSG00000022313	Utp23	84	59.809	Mus_musculus
ENSXCOG00000019504	utp23	82	59.330	MGP_SPRETEiJ_G0020678	Utp23	81	59.330	Mus_spretus
ENSXCOG00000019504	utp23	84	63.084	ENSMPUG00000000987	UTP23	84	62.201	Mustela_putorius_furo
ENSXCOG00000019504	utp23	82	61.722	ENSMLUG00000004345	UTP23	84	61.722	Myotis_lucifugus
ENSXCOG00000019504	utp23	100	87.451	ENSNBRG00000012946	utp23	100	87.451	Neolamprologus_brichardi
ENSXCOG00000019504	utp23	84	61.215	ENSNLEG00000032995	UTP23	77	60.287	Nomascus_leucogenys
ENSXCOG00000019504	utp23	84	60.280	ENSMEUG00000001566	UTP23	89	59.330	Notamacropus_eugenii
ENSXCOG00000019504	utp23	84	61.682	ENSOPRG00000011227	UTP23	84	60.766	Ochotona_princeps
ENSXCOG00000019504	utp23	95	55.967	ENSODEG00000018881	-	83	59.809	Octodon_degus
ENSXCOG00000019504	utp23	79	86.567	ENSONIG00000013525	utp23	99	86.567	Oreochromis_niloticus
ENSXCOG00000019504	utp23	89	49.123	ENSOANG00000004878	UTP23	81	50.254	Ornithorhynchus_anatinus
ENSXCOG00000019504	utp23	84	62.150	ENSOCUG00000007541	UTP23	84	61.244	Oryctolagus_cuniculus
ENSXCOG00000019504	utp23	100	85.490	ENSORLG00000001784	utp23	99	85.490	Oryzias_latipes
ENSXCOG00000019504	utp23	100	85.098	ENSORLG00020009731	utp23	99	85.098	Oryzias_latipes_hni
ENSXCOG00000019504	utp23	100	85.098	ENSORLG00015016970	utp23	99	85.098	Oryzias_latipes_hsok
ENSXCOG00000019504	utp23	98	86.056	ENSOMEG00000008767	utp23	98	86.056	Oryzias_melastigma
ENSXCOG00000019504	utp23	82	61.722	ENSOGAG00000017024	UTP23	84	61.722	Otolemur_garnettii
ENSXCOG00000019504	utp23	56	50.685	ENSOGAG00000033060	-	84	55.833	Otolemur_garnettii
ENSXCOG00000019504	utp23	84	62.617	ENSOARG00000010483	UTP23	84	61.722	Ovis_aries
ENSXCOG00000019504	utp23	84	63.551	ENSPPAG00000028660	UTP23	84	61.722	Pan_paniscus
ENSXCOG00000019504	utp23	84	63.551	ENSPPRG00000024902	UTP23	84	63.158	Panthera_pardus
ENSXCOG00000019504	utp23	84	63.551	ENSPTIG00000019925	UTP23	84	63.158	Panthera_tigris_altaica
ENSXCOG00000019504	utp23	84	63.084	ENSPTRG00000020521	UTP23	77	61.244	Pan_troglodytes
ENSXCOG00000019504	utp23	84	62.150	ENSPANG00000011559	UTP23	84	61.244	Papio_anubis
ENSXCOG00000019504	utp23	93	76.050	ENSPKIG00000018790	utp23	93	79.091	Paramormyrops_kingsleyae
ENSXCOG00000019504	utp23	84	65.421	ENSPSIG00000013132	UTP23	83	65.072	Pelodiscus_sinensis
ENSXCOG00000019504	utp23	90	75.109	ENSPMGG00000019770	utp23	90	74.236	Periophthalmus_magnuspinnatus
ENSXCOG00000019504	utp23	84	59.813	ENSPCIG00000018598	UTP23	81	58.852	Phascolarctos_cinereus
ENSXCOG00000019504	utp23	100	95.294	ENSPFOG00000003590	utp23	100	95.294	Poecilia_formosa
ENSXCOG00000019504	utp23	100	95.686	ENSPLAG00000017925	utp23	100	95.686	Poecilia_latipinna
ENSXCOG00000019504	utp23	100	95.686	ENSPMEG00000006728	utp23	100	95.686	Poecilia_mexicana
ENSXCOG00000019504	utp23	100	94.510	ENSPREG00000002478	utp23	100	94.510	Poecilia_reticulata
ENSXCOG00000019504	utp23	84	62.617	ENSPPYG00000018831	UTP23	84	61.722	Pongo_abelii
ENSXCOG00000019504	utp23	82	61.244	ENSPCAG00000009093	UTP23	84	61.244	Procavia_capensis
ENSXCOG00000019504	utp23	82	63.158	ENSPVAG00000002661	UTP23	83	61.244	Pteropus_vampyrus
ENSXCOG00000019504	utp23	100	86.275	ENSPNYG00000017636	utp23	100	86.275	Pundamilia_nyererei
ENSXCOG00000019504	utp23	80	75.862	ENSPNAG00000024538	utp23	86	74.286	Pygocentrus_nattereri
ENSXCOG00000019504	utp23	82	59.330	ENSRNOG00000004387	Utp23	84	59.330	Rattus_norvegicus
ENSXCOG00000019504	utp23	84	62.150	ENSRBIG00000026267	UTP23	84	61.244	Rhinopithecus_bieti
ENSXCOG00000019504	utp23	84	62.150	ENSRROG00000028593	UTP23	84	61.244	Rhinopithecus_roxellana
ENSXCOG00000019504	utp23	81	30.000	YOR004W	-	81	30.000	Saccharomyces_cerevisiae
ENSXCOG00000019504	utp23	82	61.722	ENSSBOG00000018914	UTP23	84	61.722	Saimiri_boliviensis_boliviensis
ENSXCOG00000019504	utp23	59	57.616	ENSSHAG00000015399	UTP23	75	55.405	Sarcophilus_harrisii
ENSXCOG00000019504	utp23	86	77.727	ENSSFOG00015009226	utp23	96	77.727	Scleropages_formosus
ENSXCOG00000019504	utp23	100	83.594	ENSSMAG00000020390	utp23	100	83.203	Scophthalmus_maximus
ENSXCOG00000019504	utp23	54	30.216	ENSSMAG00000005119	fcf1	69	30.435	Scophthalmus_maximus
ENSXCOG00000019504	utp23	95	87.967	ENSSDUG00000020272	utp23	95	89.520	Seriola_dumerili
ENSXCOG00000019504	utp23	94	88.285	ENSSLDG00000000393	utp23	95	89.083	Seriola_lalandi_dorsalis
ENSXCOG00000019504	utp23	85	67.431	ENSSPUG00000011572	UTP23	87	67.431	Sphenodon_punctatus
ENSXCOG00000019504	utp23	96	82.114	ENSSPAG00000013890	utp23	99	82.114	Stegastes_partitus
ENSXCOG00000019504	utp23	84	63.084	ENSSSCG00000030493	UTP23	83	62.201	Sus_scrofa
ENSXCOG00000019504	utp23	82	59.809	ENSTGUG00000015403	-	87	59.024	Taeniopygia_guttata
ENSXCOG00000019504	utp23	82	60.766	ENSTGUG00000012316	-	83	59.330	Taeniopygia_guttata
ENSXCOG00000019504	utp23	93	78.838	ENSTRUG00000023365	utp23	89	80.088	Takifugu_rubripes
ENSXCOG00000019504	utp23	80	60.488	ENSTBEG00000008655	UTP23	83	60.488	Tupaia_belangeri
ENSXCOG00000019504	utp23	84	63.084	ENSTTRG00000015295	UTP23	84	62.201	Tursiops_truncatus
ENSXCOG00000019504	utp23	82	61.722	ENSUMAG00000020439	UTP23	84	61.722	Ursus_maritimus
ENSXCOG00000019504	utp23	84	61.215	ENSVPAG00000009358	UTP23	84	60.287	Vicugna_pacos
ENSXCOG00000019504	utp23	82	63.158	ENSVVUG00000015307	UTP23	84	63.158	Vulpes_vulpes
ENSXCOG00000019504	utp23	82	61.244	ENSXETG00000020781	utp23	84	63.636	Xenopus_tropicalis
ENSXCOG00000019504	utp23	100	99.216	ENSXMAG00000014058	utp23	100	99.216	Xiphophorus_maculatus