EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9972 bases
Position: chrKQ557218.1:12657443-12667414
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026120	HGTP_anticodon	PF03129.20	1.7e-16	1	1
ENSXCOP00000026122	HGTP_anticodon	PF03129.20	1.8e-16	1	1
ENSXCOP00000026120	tRNA-synt_2b	PF00587.25	1.4e-37	1	1
ENSXCOP00000026122	tRNA-synt_2b	PF00587.25	1.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026434	-	1287	-	ENSXCOP00000026120	428 (aa)	-	-
ENSXCOT00000026436	-	1485	-	ENSXCOP00000026122	494 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019508	-	99	60.557	ENSXCOG00000012648	tarsl2	63	59.864
ENSXCOG00000019508	-	99	67.749	ENSXCOG00000009480	tars	66	66.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019508	-	99	65.808	ENSG00000185418	TARSL2	53	65.808	Homo_sapiens
ENSXCOG00000019508	-	97	78.606	ENSAPOG00000015706	-	100	78.824	Acanthochromis_polyacanthus
ENSXCOG00000019508	-	98	64.706	ENSAMEG00000003074	TARSL2	54	64.706	Ailuropoda_melanoleuca
ENSXCOG00000019508	-	93	90.727	ENSACIG00000007759	-	99	88.235	Amphilophus_citrinellus
ENSXCOG00000019508	-	99	83.568	ENSAOCG00000012359	-	99	84.579	Amphiprion_ocellaris
ENSXCOG00000019508	-	97	80.529	ENSAPEG00000007512	-	100	80.706	Amphiprion_percula
ENSXCOG00000019508	-	97	90.865	ENSATEG00000023568	-	67	87.069	Anabas_testudineus
ENSXCOG00000019508	-	98	66.824	ENSAPLG00000008485	TARSL2	60	65.977	Anas_platyrhynchos
ENSXCOG00000019508	-	99	63.889	ENSACAG00000003076	-	63	64.651	Anolis_carolinensis
ENSXCOG00000019508	-	98	47.393	ENSACAG00000000199	TARSL2	54	46.991	Anolis_carolinensis
ENSXCOG00000019508	-	99	60.422	ENSANAG00000020687	TARSL2	51	63.117	Aotus_nancymaae
ENSXCOG00000019508	-	93	90.000	ENSACLG00000020262	-	67	86.638	Astatotilapia_calliptera
ENSXCOG00000019508	-	97	81.490	ENSAMXG00000012533	-	65	78.667	Astyanax_mexicanus
ENSXCOG00000019508	-	99	61.827	ENSBTAG00000007651	TARSL2	53	63.208	Bos_taurus
ENSXCOG00000019508	-	99	65.351	ENSCJAG00000017350	TARSL2	51	67.792	Callithrix_jacchus
ENSXCOG00000019508	-	99	64.554	ENSCAFG00000010453	TARSL2	58	59.574	Canis_familiaris
ENSXCOG00000019508	-	99	64.319	ENSCAFG00020020868	TARSL2	69	64.319	Canis_lupus_dingo
ENSXCOG00000019508	-	99	63.700	ENSTSYG00000004538	TARSL2	65	59.783	Carlito_syrichta
ENSXCOG00000019508	-	99	56.206	ENSCAPG00000004815	TARSL2	70	52.340	Cavia_aperea
ENSXCOG00000019508	-	99	63.934	ENSCPOG00000008850	TARSL2	65	60.435	Cavia_porcellus
ENSXCOG00000019508	-	99	65.105	ENSCCAG00000030068	TARSL2	50	68.312	Cebus_capucinus
ENSXCOG00000019508	-	99	65.105	ENSCATG00000037383	TARSL2	55	65.105	Cercocebus_atys
ENSXCOG00000019508	-	99	64.403	ENSCLAG00000016873	TARSL2	61	59.660	Chinchilla_lanigera
ENSXCOG00000019508	-	99	65.105	ENSCSAG00000016828	TARSL2	53	65.105	Chlorocebus_sabaeus
ENSXCOG00000019508	-	89	66.494	ENSCHOG00000001319	TARSL2	59	67.277	Choloepus_hoffmanni
ENSXCOG00000019508	-	99	65.574	ENSCPBG00000010792	TARSL2	55	64.760	Chrysemys_picta_bellii
ENSXCOG00000019508	-	99	65.340	ENSCANG00000035438	TARSL2	60	65.340	Colobus_angolensis_palliatus
ENSXCOG00000019508	-	99	64.403	ENSCGRG00001020827	Tarsl2	59	59.448	Cricetulus_griseus_chok1gshd
ENSXCOG00000019508	-	99	64.403	ENSCGRG00000011398	Tarsl2	64	60.435	Cricetulus_griseus_crigri
ENSXCOG00000019508	-	97	86.298	ENSCSEG00000002562	-	99	84.977	Cynoglossus_semilaevis
ENSXCOG00000019508	-	93	94.000	ENSCVAG00000009253	-	100	94.200	Cyprinodon_variegatus
ENSXCOG00000019508	-	96	78.883	ENSDARG00000075385	LO017852.1	99	78.251	Danio_rerio
ENSXCOG00000019508	-	99	61.124	ENSDNOG00000046161	TARSL2	66	57.391	Dasypus_novemcinctus
ENSXCOG00000019508	-	99	64.554	ENSDORG00000009653	Tarsl2	62	63.761	Dipodomys_ordii
ENSXCOG00000019508	-	99	64.169	ENSEASG00005017718	TARSL2	58	59.236	Equus_asinus_asinus
ENSXCOG00000019508	-	99	64.403	ENSECAG00000024315	TARSL2	58	59.448	Equus_caballus
ENSXCOG00000019508	-	99	64.403	ENSEEUG00000014117	TARSL2	71	63.387	Erinaceus_europaeus
ENSXCOG00000019508	-	94	83.791	ENSELUG00000013552	-	67	78.879	Esox_lucius
ENSXCOG00000019508	-	99	64.403	ENSFCAG00000008836	TARSL2	55	62.679	Felis_catus
ENSXCOG00000019508	-	99	66.901	ENSFALG00000012444	TARSL2	59	66.055	Ficedula_albicollis
ENSXCOG00000019508	-	99	63.700	ENSFDAG00000002767	TARSL2	69	60.000	Fukomys_damarensis
ENSXCOG00000019508	-	93	94.250	ENSFHEG00000021877	-	88	89.792	Fundulus_heteroclitus
ENSXCOG00000019508	-	97	84.856	ENSGMOG00000006184	-	64	84.389	Gadus_morhua
ENSXCOG00000019508	-	94	64.925	ENSGALG00000043416	-	93	64.090	Gallus_gallus
ENSXCOG00000019508	-	99	66.197	ENSGALG00000003985	TARSL2	55	65.367	Gallus_gallus
ENSXCOG00000019508	-	97	98.077	ENSGAFG00000012691	-	65	97.118	Gambusia_affinis
ENSXCOG00000019508	-	97	87.981	ENSGACG00000011734	-	67	84.483	Gasterosteus_aculeatus
ENSXCOG00000019508	-	99	65.340	ENSGAGG00000010775	TARSL2	55	64.531	Gopherus_agassizii
ENSXCOG00000019508	-	99	65.574	ENSGGOG00000007839	TARSL2	55	65.574	Gorilla_gorilla
ENSXCOG00000019508	-	93	90.500	ENSHBUG00000003411	-	68	87.069	Haplochromis_burtoni
ENSXCOG00000019508	-	99	63.934	ENSHGLG00000011618	TARSL2	59	59.448	Heterocephalus_glaber_female
ENSXCOG00000019508	-	99	63.934	ENSHGLG00100016769	TARSL2	65	60.435	Heterocephalus_glaber_male
ENSXCOG00000019508	-	100	84.112	ENSHCOG00000014119	-	66	81.385	Hippocampus_comes
ENSXCOG00000019508	-	94	73.267	ENSIPUG00000000099	-	99	73.522	Ictalurus_punctatus
ENSXCOG00000019508	-	99	65.105	ENSSTOG00000032725	TARSL2	54	65.105	Ictidomys_tridecemlineatus
ENSXCOG00000019508	-	93	90.000	ENSKMAG00000001354	-	67	87.041	Kryptolebias_marmoratus
ENSXCOG00000019508	-	97	85.337	ENSLBEG00000026238	-	100	85.647	Labrus_bergylta
ENSXCOG00000019508	-	99	64.403	ENSLAFG00000011941	TARSL2	63	64.403	Loxodonta_africana
ENSXCOG00000019508	-	99	64.871	ENSMFAG00000001902	TARSL2	55	63.158	Macaca_fascicularis
ENSXCOG00000019508	-	99	65.105	ENSMMUG00000000278	TARSL2	55	63.397	Macaca_mulatta
ENSXCOG00000019508	-	99	64.871	ENSMNEG00000034952	TARSL2	55	63.158	Macaca_nemestrina
ENSXCOG00000019508	-	99	65.340	ENSMLEG00000035535	TARSL2	61	65.340	Mandrillus_leucophaeus
ENSXCOG00000019508	-	97	89.663	ENSMAMG00000015032	-	68	84.355	Mastacembelus_armatus
ENSXCOG00000019508	-	93	90.000	ENSMZEG00005015989	-	67	86.638	Maylandia_zebra
ENSXCOG00000019508	-	84	66.492	ENSMGAG00000004951	TARSL2	59	64.740	Meleagris_gallopavo
ENSXCOG00000019508	-	88	61.680	ENSMAUG00000015756	Tarsl2	54	61.680	Mesocricetus_auratus
ENSXCOG00000019508	-	99	64.403	ENSMICG00000013039	TARSL2	62	64.403	Microcebus_murinus
ENSXCOG00000019508	-	99	65.105	ENSMOCG00000014909	Tarsl2	54	65.105	Microtus_ochrogaster
ENSXCOG00000019508	-	94	90.025	ENSMMOG00000016135	-	100	84.966	Mola_mola
ENSXCOG00000019508	-	99	64.871	ENSMODG00000011941	TARSL2	54	64.073	Monodelphis_domestica
ENSXCOG00000019508	-	97	88.889	ENSMALG00000007340	-	67	83.761	Monopterus_albus
ENSXCOG00000019508	-	99	64.403	MGP_CAROLIEiJ_G0029834	Tarsl2	59	59.448	Mus_caroli
ENSXCOG00000019508	-	99	64.169	ENSMUSG00000030515	Tarsl2	59	59.236	Mus_musculus
ENSXCOG00000019508	-	99	64.169	MGP_PahariEiJ_G0013059	Tarsl2	59	59.448	Mus_pahari
ENSXCOG00000019508	-	99	65.105	ENSMPUG00000011032	TARSL2	55	65.105	Mustela_putorius_furo
ENSXCOG00000019508	-	99	62.295	ENSMLUG00000012870	-	58	57.962	Myotis_lucifugus
ENSXCOG00000019508	-	75	66.873	ENSMLUG00000024482	-	65	59.021	Myotis_lucifugus
ENSXCOG00000019508	-	99	64.871	ENSNGAG00000020451	Tarsl2	55	64.073	Nannospalax_galili
ENSXCOG00000019508	-	93	90.250	ENSNBRG00000003429	-	68	86.853	Neolamprologus_brichardi
ENSXCOG00000019508	-	99	65.340	ENSNLEG00000000541	TARSL2	54	65.340	Nomascus_leucogenys
ENSXCOG00000019508	-	99	58.080	ENSMEUG00000002935	TARSL2	55	57.437	Notamacropus_eugenii
ENSXCOG00000019508	-	99	42.488	ENSOPRG00000002689	-	58	40.000	Ochotona_princeps
ENSXCOG00000019508	-	99	64.403	ENSODEG00000014454	TARSL2	59	59.660	Octodon_degus
ENSXCOG00000019508	-	93	90.524	ENSONIG00000006402	-	66	90.068	Oreochromis_niloticus
ENSXCOG00000019508	-	99	64.235	ENSOANG00000013263	TARSL2	65	63.448	Ornithorhynchus_anatinus
ENSXCOG00000019508	-	99	63.934	ENSOCUG00000010740	TARSL2	64	60.217	Oryctolagus_cuniculus
ENSXCOG00000019508	-	93	87.750	ENSORLG00000010391	-	65	85.809	Oryzias_latipes
ENSXCOG00000019508	-	93	88.000	ENSORLG00020008928	-	65	86.222	Oryzias_latipes_hni
ENSXCOG00000019508	-	93	88.000	ENSORLG00015014897	-	65	86.000	Oryzias_latipes_hsok
ENSXCOG00000019508	-	93	89.750	ENSOMEG00000009022	-	66	87.556	Oryzias_melastigma
ENSXCOG00000019508	-	99	63.232	ENSOGAG00000014311	TARSL2	58	58.386	Otolemur_garnettii
ENSXCOG00000019508	-	99	61.827	ENSOARG00000016573	TARSL2	60	63.208	Ovis_aries
ENSXCOG00000019508	-	99	65.340	ENSPPAG00000040066	TARSL2	63	64.302	Pan_paniscus
ENSXCOG00000019508	-	99	64.169	ENSPPRG00000017275	TARSL2	51	67.013	Panthera_pardus
ENSXCOG00000019508	-	99	64.169	ENSPTIG00000015184	TARSL2	53	64.623	Panthera_tigris_altaica
ENSXCOG00000019508	-	99	65.574	ENSPTRG00000007516	TARSL2	53	65.574	Pan_troglodytes
ENSXCOG00000019508	-	99	61.872	ENSPANG00000022401	TARSL2	59	57.261	Papio_anubis
ENSXCOG00000019508	-	94	77.363	ENSPKIG00000010658	-	99	75.529	Paramormyrops_kingsleyae
ENSXCOG00000019508	-	99	64.871	ENSPSIG00000008419	TARSL2	75	64.073	Pelodiscus_sinensis
ENSXCOG00000019508	-	93	86.000	ENSPMGG00000007785	-	99	85.023	Periophthalmus_magnuspinnatus
ENSXCOG00000019508	-	99	64.637	ENSPEMG00000019852	Tarsl2	63	59.660	Peromyscus_maniculatus_bairdii
ENSXCOG00000019508	-	99	64.637	ENSPCIG00000022481	TARSL2	54	63.844	Phascolarctos_cinereus
ENSXCOG00000019508	-	97	96.882	ENSPFOG00000013444	-	68	95.354	Poecilia_formosa
ENSXCOG00000019508	-	97	97.115	ENSPLAG00000018145	-	65	95.565	Poecilia_latipinna
ENSXCOG00000019508	-	97	97.115	ENSPMEG00000023625	-	65	95.565	Poecilia_mexicana
ENSXCOG00000019508	-	93	94.250	ENSPREG00000017312	-	100	94.588	Poecilia_reticulata
ENSXCOG00000019508	-	99	65.574	ENSPPYG00000006830	TARSL2	66	60.510	Pongo_abelii
ENSXCOG00000019508	-	99	58.469	ENSPCAG00000011132	TARSL2	55	57.596	Procavia_capensis
ENSXCOG00000019508	-	99	48.244	ENSPCOG00000026095	TARSL2	57	44.632	Propithecus_coquereli
ENSXCOG00000019508	-	94	90.594	ENSPNYG00000004232	-	67	86.853	Pundamilia_nyererei
ENSXCOG00000019508	-	97	82.212	ENSPNAG00000002308	-	67	78.879	Pygocentrus_nattereri
ENSXCOG00000019508	-	99	65.105	ENSRBIG00000035707	TARSL2	55	65.105	Rhinopithecus_bieti
ENSXCOG00000019508	-	99	65.105	ENSRROG00000029492	TARSL2	64	61.087	Rhinopithecus_roxellana
ENSXCOG00000019508	-	99	64.871	ENSSBOG00000029807	TARSL2	66	60.870	Saimiri_boliviensis_boliviensis
ENSXCOG00000019508	-	99	65.105	ENSSHAG00000010266	TARSL2	58	64.302	Sarcophilus_harrisii
ENSXCOG00000019508	-	94	78.856	ENSSFOG00015022086	tars2	87	76.177	Scleropages_formosus
ENSXCOG00000019508	-	93	88.500	ENSSMAG00000015682	-	69	83.932	Scophthalmus_maximus
ENSXCOG00000019508	-	99	88.498	ENSSDUG00000007180	-	99	89.302	Seriola_dumerili
ENSXCOG00000019508	-	99	88.732	ENSSLDG00000015367	-	99	89.906	Seriola_lalandi_dorsalis
ENSXCOG00000019508	-	94	67.402	ENSSPUG00000001523	TARSL2	98	65.566	Sphenodon_punctatus
ENSXCOG00000019508	-	97	87.260	ENSSPAG00000018887	-	64	87.104	Stegastes_partitus
ENSXCOG00000019508	-	99	61.358	ENSSSCG00000005781	TARSL2	63	61.792	Sus_scrofa
ENSXCOG00000019508	-	95	61.029	ENSTGUG00000004602	-	98	60.284	Taeniopygia_guttata
ENSXCOG00000019508	-	99	65.741	ENSTGUG00000005726	TARSL2	66	64.932	Taeniopygia_guttata
ENSXCOG00000019508	-	93	88.750	ENSTRUG00000015004	-	99	88.498	Takifugu_rubripes
ENSXCOG00000019508	-	96	84.524	ENSTNIG00000008060	-	58	86.241	Tetraodon_nigroviridis
ENSXCOG00000019508	-	83	60.563	ENSTBEG00000001134	-	52	60.563	Tupaia_belangeri
ENSXCOG00000019508	-	99	62.061	ENSTTRG00000016207	TARSL2	61	62.061	Tursiops_truncatus
ENSXCOG00000019508	-	99	64.637	ENSUMAG00000024371	TARSL2	82	60.652	Ursus_maritimus
ENSXCOG00000019508	-	99	64.554	ENSVVUG00000014742	TARSL2	62	64.554	Vulpes_vulpes
ENSXCOG00000019508	-	97	99.038	ENSXMAG00000016382	-	65	98.226	Xiphophorus_maculatus