EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019533 (Gene tree)
Gene ID: -
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4330 bases
Position: chrKQ557218.1:12929787-12934116
Accession: ZDB-GENE-030826-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026151	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026465	-	564	-	ENSXCOP00000026151	187 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019533	rab13	85	43.902	ENSXCOG00000013344	rab33a	58	43.902
ENSXCOG00000019533	rab13	84	44.304	ENSXCOG00000015802	RAB41	75	44.304
ENSXCOG00000019533	rab13	81	39.474	ENSXCOG00000011864	rab23	71	38.323
ENSXCOG00000019533	rab13	88	41.420	ENSXCOG00000008410	si:dkey-34d22.5	76	41.420
ENSXCOG00000019533	rab13	94	36.158	ENSXCOG00000020608	hrasb	93	36.158
ENSXCOG00000019533	rab13	94	35.326	ENSXCOG00000016370	RAB29	88	35.326
ENSXCOG00000019533	rab13	91	50.000	ENSXCOG00000019310	rab12	70	50.000
ENSXCOG00000019533	rab13	76	45.455	ENSXCOG00000003192	-	67	45.455
ENSXCOG00000019533	rab13	83	39.375	ENSXCOG00000019054	rab9a	72	39.375
ENSXCOG00000019533	rab13	79	34.228	ENSXCOG00000011229	rras2	85	32.484
ENSXCOG00000019533	rab13	92	58.140	ENSXCOG00000010695	zgc:171927	84	58.140
ENSXCOG00000019533	rab13	86	39.752	ENSXCOG00000016452	rab22a	83	39.752
ENSXCOG00000019533	rab13	94	46.023	ENSXCOG00000008042	-	81	46.023
ENSXCOG00000019533	rab13	89	39.306	ENSXCOG00000009094	rab9b	85	39.306
ENSXCOG00000019533	rab13	92	36.207	ENSXCOG00000007650	rras	88	36.207
ENSXCOG00000019533	rab13	84	38.750	ENSXCOG00000009541	rab34a	62	38.750
ENSXCOG00000019533	rab13	96	35.829	ENSXCOG00000020508	kras	98	35.829
ENSXCOG00000019533	rab13	86	44.099	ENSXCOG00000006300	-	72	44.099
ENSXCOG00000019533	rab13	78	36.735	ENSXCOG00000019281	rheb	80	36.735
ENSXCOG00000019533	rab13	88	58.537	ENSXCOG00000010770	-	66	58.537
ENSXCOG00000019533	rab13	95	39.487	ENSXCOG00000002232	rab6bb	94	39.487
ENSXCOG00000019533	rab13	87	39.881	ENSXCOG00000020575	RAB9A	76	39.881
ENSXCOG00000019533	rab13	86	42.857	ENSXCOG00000016788	rab5c	75	42.857
ENSXCOG00000019533	rab13	90	43.787	ENSXCOG00000020121	rab5aa	78	43.787
ENSXCOG00000019533	rab13	91	40.217	ENSXCOG00000000469	rab33ba	76	40.217
ENSXCOG00000019533	rab13	91	43.605	ENSXCOG00000006807	rab39bb	81	43.605
ENSXCOG00000019533	rab13	93	46.243	ENSXCOG00000001357	rab11a	66	46.243
ENSXCOG00000019533	rab13	90	42.690	ENSXCOG00000003428	rab42a	78	42.690
ENSXCOG00000019533	rab13	94	37.989	ENSXCOG00000019921	rab7a	86	37.989
ENSXCOG00000019533	rab13	90	42.857	ENSXCOG00000020125	rab25a	90	43.609
ENSXCOG00000019533	rab13	78	45.395	ENSXCOG00000012032	-	69	45.395
ENSXCOG00000019533	rab13	94	46.023	ENSXCOG00000009190	-	81	46.023
ENSXCOG00000019533	rab13	67	51.587	ENSXCOG00000009194	-	93	51.587
ENSXCOG00000019533	rab13	94	42.857	ENSXCOG00000004227	rab25b	84	42.857
ENSXCOG00000019533	rab13	90	46.429	ENSXCOG00000004226	rab11al	78	46.429
ENSXCOG00000019533	rab13	90	57.988	ENSXCOG00000013842	rab1ab	83	57.988
ENSXCOG00000019533	rab13	85	43.293	ENSXCOG00000018683	zgc:101559	70	43.293
ENSXCOG00000019533	rab13	84	44.937	ENSXCOG00000006259	rab6a	76	44.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019533	rab13	93	82.659	ENSG00000143545	RAB13	85	82.659	Homo_sapiens
ENSXCOG00000019533	rab13	99	88.542	ENSACIG00000008584	rab13	92	88.542	Amphilophus_citrinellus
ENSXCOG00000019533	rab13	93	83.237	ENSANAG00000030247	-	85	83.237	Aotus_nancymaae
ENSXCOG00000019533	rab13	95	93.220	ENSAMXG00000030712	rab13	88	93.220	Astyanax_mexicanus
ENSXCOG00000019533	rab13	93	82.659	ENSBTAG00000017604	RAB13	85	82.659	Bos_taurus
ENSXCOG00000019533	rab13	86	46.914	WBGene00019317	K02E10.1	74	46.914	Caenorhabditis_elegans
ENSXCOG00000019533	rab13	93	82.659	ENSCJAG00000009933	-	85	82.659	Callithrix_jacchus
ENSXCOG00000019533	rab13	93	82.659	ENSCHIG00000022271	-	85	82.659	Capra_hircus
ENSXCOG00000019533	rab13	95	80.899	ENSCPOG00000011491	-	88	80.899	Cavia_porcellus
ENSXCOG00000019533	rab13	93	82.659	ENSCCAG00000028502	-	85	82.659	Cebus_capucinus
ENSXCOG00000019533	rab13	93	82.659	ENSCATG00000041779	-	85	82.659	Cercocebus_atys
ENSXCOG00000019533	rab13	95	80.337	ENSCLAG00000006603	-	88	80.337	Chinchilla_lanigera
ENSXCOG00000019533	rab13	93	82.659	ENSCANG00000036573	-	85	82.659	Colobus_angolensis_palliatus
ENSXCOG00000019533	rab13	93	82.659	ENSCGRG00001021505	Rab13	85	82.659	Cricetulus_griseus_chok1gshd
ENSXCOG00000019533	rab13	93	82.659	ENSCGRG00000012126	Rab13	85	82.659	Cricetulus_griseus_crigri
ENSXCOG00000019533	rab13	96	92.737	ENSCSEG00000002358	rab13	89	93.220	Cynoglossus_semilaevis
ENSXCOG00000019533	rab13	95	93.220	ENSDARG00000034771	rab13	89	93.220	Danio_rerio
ENSXCOG00000019533	rab13	93	83.815	ENSDORG00000001591	Rab13	85	83.815	Dipodomys_ordii
ENSXCOG00000019533	rab13	93	82.659	ENSEASG00005000683	-	85	82.659	Equus_asinus_asinus
ENSXCOG00000019533	rab13	93	82.659	ENSECAG00000016551	RAB13	85	82.659	Equus_caballus
ENSXCOG00000019533	rab13	93	79.191	ENSEEUG00000001233	-	85	79.191	Erinaceus_europaeus
ENSXCOG00000019533	rab13	95	90.960	ENSELUG00000012801	rab13	89	90.960	Esox_lucius
ENSXCOG00000019533	rab13	93	82.081	ENSFCAG00000045269	-	85	82.081	Felis_catus
ENSXCOG00000019533	rab13	71	86.364	ENSFDAG00000014469	-	100	86.364	Fukomys_damarensis
ENSXCOG00000019533	rab13	96	96.648	ENSFHEG00000021221	rab13	98	96.648	Fundulus_heteroclitus
ENSXCOG00000019533	rab13	95	92.655	ENSGACG00000011925	rab13	88	92.655	Gasterosteus_aculeatus
ENSXCOG00000019533	rab13	94	82.955	ENSGAGG00000000742	-	88	82.955	Gopherus_agassizii
ENSXCOG00000019533	rab13	93	82.659	ENSGGOG00000023693	RAB13	85	82.659	Gorilla_gorilla
ENSXCOG00000019533	rab13	95	79.775	ENSHGLG00000008749	RAB13	88	79.775	Heterocephalus_glaber_female
ENSXCOG00000019533	rab13	95	79.775	ENSHGLG00100013608	RAB13	88	79.775	Heterocephalus_glaber_male
ENSXCOG00000019533	rab13	97	92.857	ENSHCOG00000007440	rab13	100	92.857	Hippocampus_comes
ENSXCOG00000019533	rab13	95	93.220	ENSIPUG00000003199	rab13	88	93.220	Ictalurus_punctatus
ENSXCOG00000019533	rab13	93	83.815	ENSSTOG00000011222	-	85	83.815	Ictidomys_tridecemlineatus
ENSXCOG00000019533	rab13	95	80.899	ENSJJAG00000010575	Rab13	88	80.899	Jaculus_jaculus
ENSXCOG00000019533	rab13	95	93.785	ENSKMAG00000001908	rab13	90	92.899	Kryptolebias_marmoratus
ENSXCOG00000019533	rab13	95	94.915	ENSLBEG00000026779	rab13	89	94.915	Labrus_bergylta
ENSXCOG00000019533	rab13	95	78.090	ENSLACG00000008103	-	100	78.090	Latimeria_chalumnae
ENSXCOG00000019533	rab13	93	82.659	ENSMFAG00000041018	RAB13	85	82.659	Macaca_fascicularis
ENSXCOG00000019533	rab13	93	82.659	ENSMNEG00000028951	-	85	82.659	Macaca_nemestrina
ENSXCOG00000019533	rab13	93	82.659	ENSMLEG00000042247	-	85	82.659	Mandrillus_leucophaeus
ENSXCOG00000019533	rab13	95	96.629	ENSMAMG00000014602	rab13	89	96.610	Mastacembelus_armatus
ENSXCOG00000019533	rab13	93	83.237	ENSMAUG00000015713	Rab13	85	83.237	Mesocricetus_auratus
ENSXCOG00000019533	rab13	94	82.286	ENSMICG00000010340	-	86	82.659	Microcebus_murinus
ENSXCOG00000019533	rab13	93	83.237	ENSMOCG00000021448	Rab13	85	83.237	Microtus_ochrogaster
ENSXCOG00000019533	rab13	94	82.386	ENSMODG00000017295	-	74	82.386	Monodelphis_domestica
ENSXCOG00000019533	rab13	93	81.503	MGP_CAROLIEiJ_G0025227	Rab13	85	81.503	Mus_caroli
ENSXCOG00000019533	rab13	93	81.503	ENSMUSG00000027935	Rab13	86	81.503	Mus_musculus
ENSXCOG00000019533	rab13	96	77.005	MGP_PahariEiJ_G0026671	Rab13	93	77.005	Mus_pahari
ENSXCOG00000019533	rab13	93	82.081	ENSNGAG00000010309	Rab13	86	82.081	Nannospalax_galili
ENSXCOG00000019533	rab13	95	94.944	ENSNBRG00000004124	rab13	89	94.915	Neolamprologus_brichardi
ENSXCOG00000019533	rab13	96	80.556	ENSNLEG00000028944	-	91	80.556	Nomascus_leucogenys
ENSXCOG00000019533	rab13	95	81.356	ENSMEUG00000009667	-	87	81.356	Notamacropus_eugenii
ENSXCOG00000019533	rab13	68	86.614	ENSODEG00000012634	-	100	86.614	Octodon_degus
ENSXCOG00000019533	rab13	95	79.213	ENSODEG00000010443	-	88	79.213	Octodon_degus
ENSXCOG00000019533	rab13	95	95.506	ENSONIG00000006340	rab13	88	95.506	Oreochromis_niloticus
ENSXCOG00000019533	rab13	93	82.659	ENSOCUG00000006286	-	97	82.659	Oryctolagus_cuniculus
ENSXCOG00000019533	rab13	99	91.892	ENSOMEG00000008210	rab13	89	94.915	Oryzias_melastigma
ENSXCOG00000019533	rab13	93	81.503	ENSOGAG00000016969	-	86	81.503	Otolemur_garnettii
ENSXCOG00000019533	rab13	93	82.659	ENSPPAG00000028435	-	85	82.659	Pan_paniscus
ENSXCOG00000019533	rab13	93	82.081	ENSPPRG00000008865	-	85	82.081	Panthera_pardus
ENSXCOG00000019533	rab13	93	82.659	ENSPTRG00000001370	RAB13	85	82.659	Pan_troglodytes
ENSXCOG00000019533	rab13	93	82.659	ENSPANG00000004479	-	85	82.659	Papio_anubis
ENSXCOG00000019533	rab13	99	88.830	ENSPMGG00000007680	rab13	92	88.830	Periophthalmus_magnuspinnatus
ENSXCOG00000019533	rab13	61	86.957	ENSPEMG00000017353	-	86	86.957	Peromyscus_maniculatus_bairdii
ENSXCOG00000019533	rab13	95	81.356	ENSPCIG00000029350	-	87	81.356	Phascolarctos_cinereus
ENSXCOG00000019533	rab13	98	97.283	ENSPLAG00000005832	RAB13	98	97.283	Poecilia_latipinna
ENSXCOG00000019533	rab13	95	98.305	ENSPREG00000017567	rab13	89	98.305	Poecilia_reticulata
ENSXCOG00000019533	rab13	93	82.659	ENSPPYG00000000790	-	85	82.659	Pongo_abelii
ENSXCOG00000019533	rab13	93	83.237	ENSPCOG00000012189	-	86	83.237	Propithecus_coquereli
ENSXCOG00000019533	rab13	93	81.503	ENSPVAG00000011095	-	86	81.503	Pteropus_vampyrus
ENSXCOG00000019533	rab13	98	92.935	ENSPNAG00000004189	rab13	96	92.935	Pygocentrus_nattereri
ENSXCOG00000019533	rab13	93	82.659	ENSRNOG00000016733	Rab13	85	82.659	Rattus_norvegicus
ENSXCOG00000019533	rab13	93	82.659	ENSRBIG00000008552	-	85	82.659	Rhinopithecus_bieti
ENSXCOG00000019533	rab13	93	82.659	ENSRROG00000036885	-	85	82.659	Rhinopithecus_roxellana
ENSXCOG00000019533	rab13	93	82.659	ENSSBOG00000020342	-	86	82.659	Saimiri_boliviensis_boliviensis
ENSXCOG00000019533	rab13	95	81.921	ENSSHAG00000011866	-	87	81.921	Sarcophilus_harrisii
ENSXCOG00000019533	rab13	93	82.659	ENSSSCG00000006564	-	85	82.659	Sus_scrofa
ENSXCOG00000019533	rab13	95	93.785	ENSTRUG00000024177	rab13	89	93.785	Takifugu_rubripes
ENSXCOG00000019533	rab13	93	83.237	ENSTBEG00000012734	-	85	83.237	Tupaia_belangeri
ENSXCOG00000019533	rab13	93	82.659	ENSTTRG00000011183	-	85	82.659	Tursiops_truncatus
ENSXCOG00000019533	rab13	72	77.778	ENSXETG00000020729	rab13	84	77.778	Xenopus_tropicalis