EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019635 (Gene tree)
Gene ID: -
Gene Symbol: larp4ab
Alias: larp4b
Full Name: La ribonucleoprotein domain family%2C member 4Ab
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7211 bases
Position: chrKQ557213.1:10904848-10912058
Accession: ZDB-GENE-100729-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026293	La	PF05383.17	3.9e-16	1	1
ENSXCOP00000026296	La	PF05383.17	8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026614	-	1140	-	ENSXCOP00000026296	379 (aa)	-	-
ENSXCOT00000026611	-	645	-	ENSXCOP00000026293	214 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019635	larp4ab	97	46.226	ENSXCOG00000019952	LARP4B	68	59.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019635	larp4ab	98	57.143	ENSG00000161813	LARP4	85	71.429	Homo_sapiens
ENSXCOG00000019635	larp4ab	95	75.339	ENSAPOG00000021331	larp4ab	50	75.339	Acanthochromis_polyacanthus
ENSXCOG00000019635	larp4ab	96	58.090	ENSAMEG00000001275	LARP4	51	58.090	Ailuropoda_melanoleuca
ENSXCOG00000019635	larp4ab	97	59.471	ENSACIG00000001198	larp4aa	79	79.577	Amphilophus_citrinellus
ENSXCOG00000019635	larp4ab	78	75.904	ENSACIG00000000370	-	84	75.595	Amphilophus_citrinellus
ENSXCOG00000019635	larp4ab	95	74.797	ENSAOCG00000006387	larp4ab	50	74.797	Amphiprion_ocellaris
ENSXCOG00000019635	larp4ab	96	70.430	ENSAPEG00000015441	larp4ab	99	70.430	Amphiprion_percula
ENSXCOG00000019635	larp4ab	95	72.849	ENSATEG00000001018	larp4ab	50	72.849	Anabas_testudineus
ENSXCOG00000019635	larp4ab	98	56.471	ENSAPLG00000013661	LARP4	51	58.115	Anas_platyrhynchos
ENSXCOG00000019635	larp4ab	98	56.471	ENSANAG00000029342	LARP4	57	57.672	Aotus_nancymaae
ENSXCOG00000019635	larp4ab	99	71.366	ENSACLG00000000777	larp4ab	99	70.133	Astatotilapia_calliptera
ENSXCOG00000019635	larp4ab	96	57.672	ENSCJAG00000021131	LARP4	57	57.672	Callithrix_jacchus
ENSXCOG00000019635	larp4ab	97	58.311	ENSCAFG00000008174	LARP4	51	58.621	Canis_familiaris
ENSXCOG00000019635	larp4ab	96	58.933	ENSCAFG00020014554	LARP4	52	58.011	Canis_lupus_dingo
ENSXCOG00000019635	larp4ab	96	57.784	ENSTSYG00000004342	LARP4	57	57.407	Carlito_syrichta
ENSXCOG00000019635	larp4ab	94	41.892	ENSCAPG00000012942	LARP4	50	41.892	Cavia_aperea
ENSXCOG00000019635	larp4ab	66	59.155	ENSCCAG00000030343	-	83	55.090	Cebus_capucinus
ENSXCOG00000019635	larp4ab	98	57.480	ENSCCAG00000024439	LARP4	57	57.672	Cebus_capucinus
ENSXCOG00000019635	larp4ab	96	56.614	ENSCATG00000044528	LARP4	51	56.614	Cercocebus_atys
ENSXCOG00000019635	larp4ab	75	58.282	ENSCATG00000039611	-	84	57.988	Cercocebus_atys
ENSXCOG00000019635	larp4ab	97	57.632	ENSCLAG00000001829	LARP4	52	57.632	Chinchilla_lanigera
ENSXCOG00000019635	larp4ab	98	57.874	ENSCANG00000029159	-	57	58.201	Colobus_angolensis_palliatus
ENSXCOG00000019635	larp4ab	98	51.082	ENSCANG00000033097	-	73	56.281	Colobus_angolensis_palliatus
ENSXCOG00000019635	larp4ab	98	58.233	ENSCGRG00001010818	Larp4	51	57.979	Cricetulus_griseus_chok1gshd
ENSXCOG00000019635	larp4ab	75	66.460	ENSCGRG00001000311	-	85	66.082	Cricetulus_griseus_chok1gshd
ENSXCOG00000019635	larp4ab	75	67.081	ENSCGRG00001011674	-	77	67.836	Cricetulus_griseus_chok1gshd
ENSXCOG00000019635	larp4ab	75	65.839	ENSCGRG00001011032	-	77	62.222	Cricetulus_griseus_chok1gshd
ENSXCOG00000019635	larp4ab	76	65.644	ENSCGRG00000000087	-	85	64.881	Cricetulus_griseus_crigri
ENSXCOG00000019635	larp4ab	98	58.233	ENSCGRG00000009382	Larp4	51	58.445	Cricetulus_griseus_crigri
ENSXCOG00000019635	larp4ab	81	76.301	ENSCVAG00000001411	-	99	73.514	Cyprinodon_variegatus
ENSXCOG00000019635	larp4ab	99	60.581	ENSDARG00000074979	larp4ab	75	87.218	Danio_rerio
ENSXCOG00000019635	larp4ab	96	58.466	ENSDNOG00000038525	LARP4	51	58.466	Dasypus_novemcinctus
ENSXCOG00000019635	larp4ab	99	53.937	ENSDORG00000004013	Larp4	50	54.211	Dipodomys_ordii
ENSXCOG00000019635	larp4ab	93	45.431	ENSEBUG00000004426	LARP4	64	45.170	Eptatretus_burgeri
ENSXCOG00000019635	larp4ab	95	40.554	ENSEBUG00000010394	LARP4	52	40.554	Eptatretus_burgeri
ENSXCOG00000019635	larp4ab	99	54.688	ENSEASG00005004356	LARP4	72	60.351	Equus_asinus_asinus
ENSXCOG00000019635	larp4ab	97	58.158	ENSECAG00000012479	LARP4	51	58.201	Equus_caballus
ENSXCOG00000019635	larp4ab	99	56.132	ENSELUG00000000395	larp4aa	50	58.730	Esox_lucius
ENSXCOG00000019635	larp4ab	96	58.621	ENSFCAG00000031897	LARP4	57	58.621	Felis_catus
ENSXCOG00000019635	larp4ab	96	57.825	ENSFALG00000002114	LARP4	56	57.825	Ficedula_albicollis
ENSXCOG00000019635	larp4ab	83	63.536	ENSFDAG00000003796	-	95	63.536	Fukomys_damarensis
ENSXCOG00000019635	larp4ab	96	58.995	ENSFDAG00000006406	-	51	58.995	Fukomys_damarensis
ENSXCOG00000019635	larp4ab	95	87.363	ENSFHEG00000013854	larp4ab	50	87.363	Fundulus_heteroclitus
ENSXCOG00000019635	larp4ab	99	46.800	ENSGMOG00000009536	-	50	54.142	Gadus_morhua
ENSXCOG00000019635	larp4ab	95	95.652	ENSGAFG00000021777	larp4ab	50	95.652	Gambusia_affinis
ENSXCOG00000019635	larp4ab	67	80.420	ENSGAFG00000004280	larp4aa	72	73.864	Gambusia_affinis
ENSXCOG00000019635	larp4ab	96	73.262	ENSGACG00000000680	larp4ab	55	73.262	Gasterosteus_aculeatus
ENSXCOG00000019635	larp4ab	97	58.400	ENSGACG00000008381	larp4aa	99	58.400	Gasterosteus_aculeatus
ENSXCOG00000019635	larp4ab	96	58.421	ENSGAGG00000006969	LARP4	51	58.421	Gopherus_agassizii
ENSXCOG00000019635	larp4ab	98	57.143	ENSGGOG00000015230	LARP4	74	66.316	Gorilla_gorilla
ENSXCOG00000019635	larp4ab	84	76.111	ENSHBUG00000021929	-	88	75.135	Haplochromis_burtoni
ENSXCOG00000019635	larp4ab	97	58.947	ENSHGLG00000005513	-	57	58.947	Heterocephalus_glaber_female
ENSXCOG00000019635	larp4ab	98	53.774	ENSHGLG00000010979	-	76	49.728	Heterocephalus_glaber_female
ENSXCOG00000019635	larp4ab	97	58.947	ENSHGLG00100016984	-	52	58.947	Heterocephalus_glaber_male
ENSXCOG00000019635	larp4ab	98	51.190	ENSHGLG00100000622	-	98	54.467	Heterocephalus_glaber_male
ENSXCOG00000019635	larp4ab	98	55.466	ENSHGLG00100011678	-	51	57.967	Heterocephalus_glaber_male
ENSXCOG00000019635	larp4ab	98	53.774	ENSHGLG00100002832	-	76	49.728	Heterocephalus_glaber_male
ENSXCOG00000019635	larp4ab	99	59.829	ENSIPUG00000021659	larp4ab	55	57.867	Ictalurus_punctatus
ENSXCOG00000019635	larp4ab	97	58.158	ENSSTOG00000003553	LARP4	51	58.158	Ictidomys_tridecemlineatus
ENSXCOG00000019635	larp4ab	95	55.708	ENSJJAG00000014649	-	79	74.265	Jaculus_jaculus
ENSXCOG00000019635	larp4ab	95	80.654	ENSKMAG00000018556	larp4ab	50	80.654	Kryptolebias_marmoratus
ENSXCOG00000019635	larp4ab	96	73.190	ENSLBEG00000019306	larp4ab	50	73.190	Labrus_bergylta
ENSXCOG00000019635	larp4ab	96	55.440	ENSLACG00000019090	LARP4	51	55.959	Latimeria_chalumnae
ENSXCOG00000019635	larp4ab	99	55.426	ENSLAFG00000005160	LARP4	51	58.158	Loxodonta_africana
ENSXCOG00000019635	larp4ab	98	57.874	ENSMFAG00000043681	LARP4	57	58.201	Macaca_fascicularis
ENSXCOG00000019635	larp4ab	75	58.896	ENSMFAG00000001037	-	84	58.580	Macaca_fascicularis
ENSXCOG00000019635	larp4ab	98	57.874	ENSMMUG00000008172	LARP4	57	58.201	Macaca_mulatta
ENSXCOG00000019635	larp4ab	75	58.896	ENSMMUG00000045683	-	84	58.580	Macaca_mulatta
ENSXCOG00000019635	larp4ab	69	56.667	ENSMNEG00000037799	-	83	53.846	Macaca_nemestrina
ENSXCOG00000019635	larp4ab	98	57.143	ENSMLEG00000039661	LARP4	57	58.201	Mandrillus_leucophaeus
ENSXCOG00000019635	larp4ab	82	55.618	ENSMLEG00000038232	-	95	55.618	Mandrillus_leucophaeus
ENSXCOG00000019635	larp4ab	95	72.237	ENSMAMG00000002616	larp4ab	50	72.237	Mastacembelus_armatus
ENSXCOG00000019635	larp4ab	99	71.366	ENSMZEG00005007771	larp4ab	99	70.400	Maylandia_zebra
ENSXCOG00000019635	larp4ab	74	70.807	ENSMICG00000046883	-	85	70.303	Microcebus_murinus
ENSXCOG00000019635	larp4ab	98	60.766	ENSMICG00000030156	-	73	64.286	Microcebus_murinus
ENSXCOG00000019635	larp4ab	97	58.201	ENSMOCG00000020635	Larp4	51	58.201	Microtus_ochrogaster
ENSXCOG00000019635	larp4ab	98	70.509	ENSMMOG00000021861	larp4ab	96	64.130	Mola_mola
ENSXCOG00000019635	larp4ab	81	51.389	ENSMODG00000004844	-	99	54.795	Monodelphis_domestica
ENSXCOG00000019635	larp4ab	79	78.107	ENSMALG00000015637	-	85	70.707	Monopterus_albus
ENSXCOG00000019635	larp4ab	63	83.582	ENSMALG00000018631	larp4aa	72	83.582	Monopterus_albus
ENSXCOG00000019635	larp4ab	98	58.635	MGP_CAROLIEiJ_G0020281	Larp4	84	59.639	Mus_caroli
ENSXCOG00000019635	larp4ab	98	58.233	ENSMUSG00000023025	Larp4	60	58.777	Mus_musculus
ENSXCOG00000019635	larp4ab	97	58.995	MGP_PahariEiJ_G0020284	Larp4	51	59.043	Mus_pahari
ENSXCOG00000019635	larp4ab	96	59.259	ENSMLUG00000012513	-	51	59.259	Myotis_lucifugus
ENSXCOG00000019635	larp4ab	98	56.855	ENSNGAG00000001577	-	52	57.979	Nannospalax_galili
ENSXCOG00000019635	larp4ab	99	72.811	ENSNBRG00000015675	larp4ab	99	69.600	Neolamprologus_brichardi
ENSXCOG00000019635	larp4ab	98	57.937	ENSNLEG00000017798	LARP4	57	58.466	Nomascus_leucogenys
ENSXCOG00000019635	larp4ab	97	56.126	ENSODEG00000009770	LARP4	52	58.090	Octodon_degus
ENSXCOG00000019635	larp4ab	95	60.811	ENSONIG00000011895	larp4aa	50	57.653	Oreochromis_niloticus
ENSXCOG00000019635	larp4ab	97	72.193	ENSONIG00000019124	larp4ab	51	72.193	Oreochromis_niloticus
ENSXCOG00000019635	larp4ab	96	57.292	ENSOANG00000004373	LARP4	66	57.292	Ornithorhynchus_anatinus
ENSXCOG00000019635	larp4ab	96	59.580	ENSOCUG00000026872	-	51	59.580	Oryctolagus_cuniculus
ENSXCOG00000019635	larp4ab	98	55.906	ENSOCUG00000021417	-	51	57.702	Oryctolagus_cuniculus
ENSXCOG00000019635	larp4ab	79	73.373	ENSORLG00000018835	-	92	65.979	Oryzias_latipes
ENSXCOG00000019635	larp4ab	86	68.306	ENSORLG00020009602	-	92	64.948	Oryzias_latipes_hni
ENSXCOG00000019635	larp4ab	78	75.301	ENSORLG00015005865	-	93	66.492	Oryzias_latipes_hsok
ENSXCOG00000019635	larp4ab	89	67.539	ENSOMEG00000008561	-	97	66.842	Oryzias_melastigma
ENSXCOG00000019635	larp4ab	97	60.889	ENSOMEG00000019749	larp4aa	96	60.000	Oryzias_melastigma
ENSXCOG00000019635	larp4ab	99	55.344	ENSOGAG00000001415	LARP4	72	54.856	Otolemur_garnettii
ENSXCOG00000019635	larp4ab	97	46.429	ENSPPAG00000039122	-	86	48.919	Pan_paniscus
ENSXCOG00000019635	larp4ab	98	56.126	ENSPPAG00000035100	LARP4	62	57.937	Pan_paniscus
ENSXCOG00000019635	larp4ab	96	58.621	ENSPPRG00000004522	LARP4	57	58.621	Panthera_pardus
ENSXCOG00000019635	larp4ab	96	58.621	ENSPTIG00000015617	LARP4	57	58.621	Panthera_tigris_altaica
ENSXCOG00000019635	larp4ab	98	56.917	ENSPTRG00000004935	LARP4	57	57.937	Pan_troglodytes
ENSXCOG00000019635	larp4ab	96	47.906	ENSPTRG00000045907	-	96	49.067	Pan_troglodytes
ENSXCOG00000019635	larp4ab	98	57.874	ENSPANG00000022964	LARP4	57	58.201	Papio_anubis
ENSXCOG00000019635	larp4ab	97	58.005	ENSPSIG00000015867	LARP4	51	58.047	Pelodiscus_sinensis
ENSXCOG00000019635	larp4ab	98	67.773	ENSPMGG00000002719	larp4ab	99	61.559	Periophthalmus_magnuspinnatus
ENSXCOG00000019635	larp4ab	63	84.328	ENSPMGG00000023289	-	88	84.328	Periophthalmus_magnuspinnatus
ENSXCOG00000019635	larp4ab	98	63.426	ENSPEMG00000018433	Larp4	51	57.256	Peromyscus_maniculatus_bairdii
ENSXCOG00000019635	larp4ab	63	67.910	ENSPMAG00000002788	LARP4	50	54.198	Petromyzon_marinus
ENSXCOG00000019635	larp4ab	64	60.584	ENSPMAG00000001038	-	97	52.846	Petromyzon_marinus
ENSXCOG00000019635	larp4ab	96	59.840	ENSPCIG00000000384	LARP4	51	59.788	Phascolarctos_cinereus
ENSXCOG00000019635	larp4ab	97	60.426	ENSPFOG00000013148	larp4aa	53	61.475	Poecilia_formosa
ENSXCOG00000019635	larp4ab	95	96.133	ENSPFOG00000009764	larp4ab	50	96.133	Poecilia_formosa
ENSXCOG00000019635	larp4ab	95	96.133	ENSPLAG00000008502	larp4ab	50	96.133	Poecilia_latipinna
ENSXCOG00000019635	larp4ab	95	96.133	ENSPMEG00000002720	larp4ab	50	96.133	Poecilia_mexicana
ENSXCOG00000019635	larp4ab	99	96.543	ENSPREG00000016263	larp4ab	100	96.543	Poecilia_reticulata
ENSXCOG00000019635	larp4ab	81	49.541	ENSPPYG00000006330	-	96	50.000	Pongo_abelii
ENSXCOG00000019635	larp4ab	98	56.972	ENSPPYG00000004512	-	72	57.560	Pongo_abelii
ENSXCOG00000019635	larp4ab	98	56.693	ENSPCOG00000026291	LARP4	57	57.937	Propithecus_coquereli
ENSXCOG00000019635	larp4ab	85	75.275	ENSPNYG00000000915	-	75	75.135	Pundamilia_nyererei
ENSXCOG00000019635	larp4ab	81	49.296	ENSRNOG00000057943	AABR07058884.2	98	50.230	Rattus_norvegicus
ENSXCOG00000019635	larp4ab	96	58.201	ENSRBIG00000038857	-	83	58.201	Rhinopithecus_bieti
ENSXCOG00000019635	larp4ab	98	56.641	ENSRROG00000042764	-	83	58.201	Rhinopithecus_roxellana
ENSXCOG00000019635	larp4ab	98	57.619	ENSRROG00000025487	-	87	53.740	Rhinopithecus_roxellana
ENSXCOG00000019635	larp4ab	98	64.286	ENSSBOG00000026650	LARP4	57	56.878	Saimiri_boliviensis_boliviensis
ENSXCOG00000019635	larp4ab	73	57.325	ENSSBOG00000035851	-	80	57.325	Saimiri_boliviensis_boliviensis
ENSXCOG00000019635	larp4ab	64	79.562	ENSSHAG00000013246	-	75	72.481	Sarcophilus_harrisii
ENSXCOG00000019635	larp4ab	99	61.345	ENSSFOG00015003868	larp4aa	50	64.067	Scleropages_formosus
ENSXCOG00000019635	larp4ab	96	58.115	ENSSARG00000012469	LARP4	52	58.115	Sorex_araneus
ENSXCOG00000019635	larp4ab	95	75.610	ENSSPAG00000002172	larp4ab	50	75.610	Stegastes_partitus
ENSXCOG00000019635	larp4ab	99	59.307	ENSSPAG00000007222	larp4aa	99	59.677	Stegastes_partitus
ENSXCOG00000019635	larp4ab	96	58.047	ENSSSCG00000028516	LARP4	51	58.047	Sus_scrofa
ENSXCOG00000019635	larp4ab	98	55.512	ENSTGUG00000003479	LARP4	51	57.256	Taeniopygia_guttata
ENSXCOG00000019635	larp4ab	93	56.438	ENSTRUG00000015939	larp4aa	100	56.438	Takifugu_rubripes
ENSXCOG00000019635	larp4ab	98	67.632	ENSTRUG00000007206	larp4ab	52	67.632	Takifugu_rubripes
ENSXCOG00000019635	larp4ab	96	69.189	ENSTNIG00000014571	larp4ab	52	69.189	Tetraodon_nigroviridis
ENSXCOG00000019635	larp4ab	96	58.486	ENSTTRG00000003764	LARP4	51	58.486	Tursiops_truncatus
ENSXCOG00000019635	larp4ab	96	58.886	ENSUAMG00000013764	LARP4	83	58.621	Ursus_americanus
ENSXCOG00000019635	larp4ab	96	58.621	ENSUMAG00000008473	LARP4	51	58.621	Ursus_maritimus
ENSXCOG00000019635	larp4ab	96	56.589	ENSVPAG00000010136	LARP4	52	56.589	Vicugna_pacos
ENSXCOG00000019635	larp4ab	96	58.777	ENSVVUG00000024717	LARP4	52	58.621	Vulpes_vulpes